LOC120567855


Basic Information

Item Value
gene id LOC120567855
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17297055 ~ 17298924 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814936.1
ATAAAATAACCACACCTGATGAGAACTCGTTATTGCTAATTGATTTCAGATGGGGTAACCACAATTGGTCATTAGATATAAGTGAGGGTCTGAACACTGGCAATTTCTTTCAACATGGACCAGGATAGACAGCAAGGAATTGGAAGAGCTCGTGGACGAGGGATCTGTCAGAGAGGTGGGCATGGGGCCCATCAAAGGGTTGGTCATCGGAGAGGGGGAGGCAGAACTGTCTCTAATGAAGTCCGGGCCATCGTCGTTGATCATGTGGTGAACCGAGGCCTTACTATGGCAGAAGCTGCCAGATTAGTTGAGCCAAATCTAAAAAGATCAACTGTCAATTCTATCATCCGAACCTTTCGCCAAGAAAACCGAATTAACAGAAAACCCCATAGTGGTGGCCGTGTGCTGACCGACCAGCAAGAGTTGGCAGTGGTGGAAATGGTGAGGGCCAGGAATGATATACGGCTGTCAGAAATAAAGCAGGAAATTGAGAACAATGACACCTTTGCCAATGTGGCATCCATCAGCCTACCAACAGTAGCCCGCCTTTTAAAGTGGCACCAGGtatcaatgaaacacatttaccTGGTGCCTTTTGAGAGAAACAATGACCGGGTGAAACAACTAAGGGCTGAAGGGTTATGGTGCTTGACGCTGATGTGAACCATCACAAGTACGTTTTTGTTGATGAAGCGGGCTTTAACCTTGCCAAAACTCGTCGCCGTGGACGTAACATTATCGGCCAACGGGCCACTGTCCAAGTGCCTGGACAACGTGGAGGAAACATCTCTATGTGCGCAGCTATCTCTGAAGATGGTGTCCTAGGACGTAGGCCATTACTTGGCTCCTATAATGCTGCACATCTTATTGAGTTTCTCAATGAAATTGAGCTGGCCTGTCAAGGTGAAGGGGTCACATATGTAATTGTGTGGGACAATGTCAGTTTTCACCACGCAGAGGTAGTTCAAGCATGGTTTCAGACCCATCCTCGATTCATGACCCTCTACCTGCCTCCATACTCTCCTTTCCTCAACCCTATTGAGGAATTTTTTTCagcatggaggtggaaggtcTATGATCGCCATCCCCTTGAGCGTGCCACCCTCCTTCAGGCCATGGATGATGCATGTGATGACATCAATGTAGACCAATGTCAAGCATGGATTCGTCATGCCAAAAGATTTTTTCCAAGGTGCTTGAACAATGAAAACATTCATTGTGATGTGGACGAGAATCTATGGCCAAATGCTCAAGACAGGCTTGAGCCaaattaatgtaatgtgtgCACTAATTATGTTTTGTTCTCATTTAGTTACATTATAGAAAATATAACTATGTTACAATTatatctgaaaaataaaaactaatttgccCAAATGATTGTAGAGGATGTCTTCATTGATCcttcacttgattacacatagGAGAGATATTTTGGAAATGATAGATTATGTAAATGTAAGTAATGTAAGTGTATTGcctaatgtgtaactgtgtaataTGTATTTTATAGTACTATAGCATATTGATTTCAGCACTTCTAAGGCTGATTTGAAACCTGTATATTGCATTGTTTGCTGTTGGATGAACTGACTGTTAAAAGTACTAAACTGAAAGAAGATCATACTGTTGTGTT

Function

GO: NA

KEGG:

id description
K07494 K07494; putative transposase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814936.1 True 1636 mRNA 0.43 3 17297055 17298924

Neighbor

gene id symbol gene type direction distance location
LOC120568842 LOC103353955,LOC104931259 coding downstream 21266 17183162 ~ 17275789 (-)
LOC120569119 LOC101466820,LOC102797643,LOC103353954,LOC100700019 coding downstream 120644 17165891 ~ 17176411 (-)
LOC120567671 lrrc30,LOC104932041,LOC103353948 coding downstream 274662 17020735 ~ 17022393 (-)
LOC120568369 ptprm,LOC102799796 coding downstream 281429 16847810 ~ 17015626 (-)
LOC120567917 tmem200c,LOC104967041 coding downstream 477021 16814692 ~ 16820034 (-)
LOC120569062 LOC103353959 coding upstream 193363 17492287 ~ 17542090 (-)
ndc1 ndc1 coding upstream 257056 17555980 ~ 17564537 (-)
zgc:113691 LOC103353967,LOC104931261,LOC102192286 coding upstream 265787 17564711 ~ 17567046 (-)
yipf1 yipf1 coding upstream 268428 17567352 ~ 17571388 (-)
tmem59 tmem59 coding upstream 276382 17575306 ~ 17579575 (-)
G115435 NA non-coding downstream 132360 17164369 ~ 17164695 (-)
G115434 LOC103353952,LOC100690840 non-coding downstream 155838 17137754 ~ 17141217 (-)
G115433 abca4,LOC108232920,LOC100690840,LOC102789304,LOC102216210,LOC101466350 non-coding downstream 161242 17133873 ~ 17135813 (-)
G115430 LOC102789304,LOC101466350,LOC102216210,LOC102305671,LOC100690840 non-coding downstream 173997 17122722 ~ 17123058 (-)
G115429 NA non-coding downstream 176009 17119921 ~ 17121046 (-)
G115458 NA non-coding upstream 3340 17302264 ~ 17302558 (-)
LOC120568661 NA non-coding upstream 57427 17356351 ~ 17357209 (-)
G115563 dcaf8 non-coding upstream 249296 17548220 ~ 17552950 (-)
G115568 NA non-coding upstream 273973 17572897 ~ 17573129 (-)
G115570 lrrc42 non-coding upstream 274539 17573463 ~ 17574125 (-)
ly97.3 NA other downstream 188151 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 251993 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 485137 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 657243 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 961099 16330952 ~ 16335956 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 754060 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 1181746 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1404140 18703064 ~ 18720587 (-)
G115941 NA other upstream 1545981 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 1633050 18931974 ~ 18935491 (-)

Expression


Co-expression Network