LOC120567858 (LOC103355152)


Basic Information

Item Value
gene id LOC120567858
gene name LOC103355152
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11055838 ~ 11094619 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814939.1
AAATTTGGCATATAAACGCAAAATGAGCAGCGGTCCCATGCAGCCAGTAGCACACAGAGCCAGCTGAGGAATTCAACAGGTACCTATAGACATTtttgagctctctctctctcttccagcGTGGATGTACCAACTGCCTGCTCTCATTCTGTGTGATGGATGGAATTAAAGGCTCCATGGATTGGAAACCTGTCACTCTGCAATAATCTCAAGGTTTTCTGGCATCTGGAATATCGCACCTTGGAGGTATTTCGATCAATTTGGCAGAACTTAAAGACATCAAAAAGGCTTAATTCAGCTGCAGTATTTCCCCCATCATGAAGAGGTCTCTTCCTTTCCCAGGCTGGGTAAGAGCAGCGAGCTTGTTCCTATGTTTGACTCAGACCGCCCTGGCAATGGTCCTCACCAACTCCACACAACTCGAGTCCATCCTGGACAAATACAGAGAAAAGGATGAGGAGTGGTGGAGGGCCCGGTCGCGAGGGAAGAGGGCCATCAGCGATGGAGACATGCACCTCATCCTGGACTTGCACAACAAGCTACGGGGTCAGGTCTACCCTCCTGCCTCCAACATGGAGTACATGGTATGGGATTATGAGTTAGAGAGGAGTGCAGAGCACTGGGCATATACCTGCCGATGGGAACATGGACCGAGCCATATGTTGACACAAATAGGACAAAACCTTGGAGCGCACTGGGGCAGGGACCGCCCCCCTACCTACCATGTCCAGGCCTGGTATGATGAGGTGAGGGACTACAGCTATCCCTACTCCCAGGAGTGTAACCCACACTGCCCATTCAGATGTTCAGGACCTGTTTGTACTCACTACACTCAGttGGTGTGGGCGACTAGCAATCGTATTGGCTGTGCCATCAATGTGTGTTACAACATGAACGTTTGGGGAATGATCTGGGCTAAAGCTGTCTATCTGGTCTGCAACTACTCTCCACCGGGCAACTGGTGGGGTCATGCTCCTTACAAATATGGATCTCCCTGTTCTGCCTGTCCCGCTAGCTATGCTGGAGGCTGCAGGGACAATCTCTGCTACAAAGACGGGGGTGTTGACAGGCGTCCCGCTCCTGGGATTGAGGAGACCAACTACATTGAACCTGAAGCAGAACCAGTGAGGGACAGGGAGCCCCAACCCAGGGCCCAGACGCCAAACCCCTCACCCAATGACAACATAGAGAGAAACCAGGTTGTCAGCGCAGAGCAGATGTGTCAACAGGTCGACTGTAAGACTAAGCTGAGAGATCGGTGCAAGGGGACAACCTGTAACAGATATGAGTGTCCACCTGGCTGCCTTGACACGCCGGGAAAAGTAGTTGGGACTGGCTATTATGACATGCAATCCAGCGTGTGTGGAGCTGGGTTACACGCTGGTGTTATTGACAATGACGGGGGATGGCTGGATGTGACCAGACTGGGCAGAAAACAACAATTCACCAAGTCATACAAGAATGGTATTCAGTCAATTGGGAAAAACAGGAGTGCAAATTCCTTCAAAGTAGAGACAGTGCCTGTCAAGGCAGTAACATGTGATACCACCGTTGCACTTTTCTGCCCTTTCAAGAAACCTGTACGACACTGTCCCAGGTTGTATTGTCCCAGGAACTGTCTGCGTGACAGTCAAGCCCGAGTCATTGGGACAAAATACTATTCAGATAAATCCAGTATCTGCCGAGCAGCCATTCATGCTGGAGTGATCCAGAATGAGTCAGGAGGGTACCTCGATGTGATGCCAGTGGACAAAAGGCAGCAGTACAGTGGCAGTTACCAGAATGGCGTCAATTCAGAGagCCTACTGAACCCAACAGGTGGAAAAGCCTTCAGAGTGTTTGCAGTCATCTGAAAAACCACTCTCAAAGGACAGCGTACCGTCAAACAAGGCCATATCACATCCAGCGAACCCAGTCATTATTATCTTACAACATGTAATTACATTCATTCCTTCAGTAAATAATTCAGCTTCTGACACTAAAAGTGTAACATGGCTTTACTCAAGGCTTCCCGTCTATGTTTGGTCATGAGTGAACCAGTGTCCAGTAATTTGTTTGGTGAATGATGATCCTGGATGTCTTCTGCCTTACGGCATTCCGAAATGTCTAGTGCTGACCGTAATAATCACTCCCATGCATCATGCTGACATGATATCATGACTTCATGTTTTTTATCACTTAAAGTTGAATATACACCACCAGATTTAGCACCACTCCAAATGCCTCCCACAATTTCCAAACATGAAGGTTAAAATATAACATCATAGCTTTTACCAAACTAATTTTAGATGTAGTATGCCTCAGCTCCATGTCAACATAAACCAAAATGGGGCAGTCAGATACAGAGTCATAAAATCTGTTCAGACATTTTGTGGGAACAAGATTAGACTACTATTCAGTCAGACCATCCCTGCTGAAATTAACTACCTGGGTATTTGATGTCATCCCACTTACCCAAAACTCCATCTTGTATTTTCCTGTGGAGGACCAAACCAGGCAAATTATTGagtaaaattacaaataaatTGATATAATAACCCATTGGCTATGTCTGGTGATCAGCTCTGGTGGGCAACAGCCAATATCTCTGGGGTTCAGGTGTAGCCAGCGGATATCCAGACAATGGATTTCCAGGCCAAGACTTCTCCTGCTGTGCGCTGGTCATTGTTTACAGTCCGAGTTGAGAGACGTCTCTataaacagatatctgcatTTGAATGCATTTAAATAATGCGTGATTGGTCAATACTACTCAGACTACAAACATGATCACCAATGATTTTAATACCAAAATCTTGCATTCATATGAAGATATCTGTAATAAAGATGTTCAATAtatgctgttatagagatgatATAGCCCCGGTTTGCTAGAGTCATATTTGAAAATTTTCCATGGGGAAGGGTTTAGCGAGCTGTCAATGTCAATTCATGGGGAAACAGCAGCATGTGTGTTGGGAATGACCCATGTGGCTTAATTTCAAACTTTGCTTTTTGAAGATAGAATTATGTCATACTTTTTGTTTAActattaaatataataaatcaGGCCATGCACACAGGAACAATTTAaatgctttttcatttttaagtctGGTTTGGGCCTCCATATATCACTTATTTTCATCACAGTggtaatatatacagtacattatagCAACAATGCAAGCAGTAAAAtacatattgtatatttttgtacATAATGTTGTAAATAATATTGAACACTTTGTTATGAAAAGCTTGCTACTGTTGCCTTTTTCATTAACATTTCTAATACATTGCCAGCCATATGAAGAGCAATATAAGCAATAAGCAGATGCTGAAACAGATTCTGCATGCAAAACATATATATGTCACatcaagcttttatttttataaaggaAAAACAATAATTCTAGTACATTCATATGTTTGTAAATATTGTGTATGTAacaaattgttgtattttatactGCATTTCCCAGCTTTTgtttatagatatatataaatgGACCCTGGCTGGCCAGGAATGTGCATGGCAAAATCACAATAAAAACACTTGGATTAAATtcaaa
>XM_039814940.1
TCACGGAAGCGGGCCGCTGACAACTGCAAACCACACACTTCTACACGGAGAACATTATTGAAGACAAAGACGCTGAAAGACTACTCTTGTTTTCCCACAACTCAACTTTTGtaaatacaccttttaaaacGTGAACTACAACAACAAGGACAATCTGGGCTGGCCCTGCGAGGATGCAACAGACCGAGAGCGACAGCATGGTCAACAAAGCAAGCAGCCATCTTCAGACGTGAAACAAAACAACGGCTGGcGTGGATGTACCAACTGCCTGCTCTCATTCTGTGTGATGGATGGAATTAAAGGCTCCATGGATTGGAAACCTGTCACTCTGCAATAATCTCAAGGTTTTCTGGCATCTGGAATATCGCACCTTGGAGGTATTTCGATCAATTTGGCAGAACTTAAAGACATCAAAAAGGCTTAATTCAGCTGCAGTATTTCCCCCATCATGAAGAGGTCTCTTCCTTTCCCAGGCTGGGTAAGAGCAGCGAGCTTGTTCCTATGTTTGACTCAGACCGCCCTGGCAATGGTCCTCACCAACTCCACACAACTCGAGTCCATCCTGGACAAATACAGAGAAAAGGATGAGGAGTGGTGGAGGGCCCGGTCGCGAGGGAAGAGGGCCATCAGCGATGGAGACATGCACCTCATCCTGGACTTGCACAACAAGCTACGGGGTCAGGTCTACCCTCCTGCCTCCAACATGGAGTACATGGTATGGGATTATGAGTTAGAGAGGAGTGCAGAGCACTGGGCATATACCTGCCGATGGGAACATGGACCGAGCCATATGTTGACACAAATAGGACAAAACCTTGGAGCGCACTGGGGCAGGGACCGCCCCCCTACCTACCATGTCCAGGCCTGGTATGATGAGGTGAGGGACTACAGCTATCCCTACTCCCAGGAGTGTAACCCACACTGCCCATTCAGATGTTCAGGACCTGTTTGTACTCACTACACTCAGttGGTGTGGGCGACTAGCAATCGTATTGGCTGTGCCATCAATGTGTGTTACAACATGAACGTTTGGGGAATGATCTGGGCTAAAGCTGTCTATCTGGTCTGCAACTACTCTCCACCGGGCAACTGGTGGGGTCATGCTCCTTACAAATATGGATCTCCCTGTTCTGCCTGTCCCGCTAGCTATGCTGGAGGCTGCAGGGACAATCTCTGCTACAAAGACGGGGGTGTTGACAGGCGTCCCGCTCCTGGGATTGAGGAGACCAACTACATTGAACCTGAAGCAGAACCAGTGAGGGACAGGGAGCCCCAACCCAGGGCCCAGACGCCAAACCCCTCACCCAATGACAACATAGAGAGAAACCAGGTTGTCAGCGCAGAGCAGATGTGTCAACAGGTCGACTGTAAGACTAAGCTGAGAGATCGGTGCAAGGGGACAACCTGTAACAGATATGAGTGTCCACCTGGCTGCCTTGACACGCCGGGAAAAGTAGTTGGGACTGGCTATTATGACATGCAATCCAGCGTGTGTGGAGCTGGGTTACACGCTGGTGTTATTGACAATGACGGGGGATGGCTGGATGTGACCAGACTGGGCAGAAAACAACAATTCACCAAGTCATACAAGAATGGTATTCAGTCAATTGGGAAAAACAGGAGTGCAAATTCCTTCAAAGTAGAGACAGTGCCTGTCAAGGCAGTAACATGTGATACCACCGTTGCACTTTTCTGCCCTTTCAAGAAACCTGTACGACACTGTCCCAGGTTGTATTGTCCCAGGAACTGTCTGCGTGACAGTCAAGCCCGAGTCATTGGGACAAAATACTATTCAGATAAATCCAGTATCTGCCGAGCAGCCATTCATGCTGGAGTGATCCAGAATGAGTCAGGAGGGTACCTCGATGTGATGCCAGTGGACAAAAGGCAGCAGTACAGTGGCAGTTACCAGAATGGCGTCAATTCAGAGagCCTACTGAACCCAACAGGTGGAAAAGCCTTCAGAGTGTTTGCAGTCATCTGAAAAACCACTCTCAAAGGACAGCGTACCGTCAAACAAGGCCATATCACATCCAGCGAACCCAGTCATTATTATCTTACAACATGTAATTACATTCATTCCTTCAGTAAATAATTCAGCTTCTGACACTAAAAGTGTAACATGGCTTTACTCAAGGCTTCCCGTCTATGTTTGGTCATGAGTGAACCAGTGTCCAGTAATTTGTTTGGTGAATGATGATCCTGGATGTCTTCTGCCTTACGGCATTCCGAAATGTCTAGTGCTGACCGTAATAATCACTCCCATGCATCATGCTGACATGATATCATGACTTCATGTTTTTTATCACTTAAAGTTGAATATACACCACCAGATTTAGCACCACTCCAAATGCCTCCCACAATTTCCAAACATGAAGGTTAAAATATAACATCATAGCTTTTACCAAACTAATTTTAGATGTAGTATGCCTCAGCTCCATGTCAACATAAACCAAAATGGGGCAGTCAGATACAGAGTCATAAAATCTGTTCAGACATTTTGTGGGAACAAGATTAGACTACTATTCAGTCAGACCATCCCTGCTGAAATTAACTACCTGGGTATTTGATGTCATCCCACTTACCCAAAACTCCATCTTGTATTTTCCTGTGGAGGACCAAACCAGGCAAATTATTGagtaaaattacaaataaatTGATATAATAACCCATTGGCTATGTCTGGTGATCAGCTCTGGTGGGCAACAGCCAATATCTCTGGGGTTCAGGTGTAGCCAGCGGATATCCAGACAATGGATTTCCAGGCCAAGACTTCTCCTGCTGTGCGCTGGTCATTGTTTACAGTCCGAGTTGAGAGACGTCTCTataaacagatatctgcatTTGAATGCATTTAAATAATGCGTGATTGGTCAATACTACTCAGACTACAAACATGATCACCAATGATTTTAATACCAAAATCTTGCATTCATATGAAGATATCTGTAATAAAGATGTTCAATAtatgctgttatagagatgatATAGCCCCGGTTTGCTAGAGTCATATTTGAAAATTTTCCATGGGGAAGGGTTTAGCGAGCTGTCAATGTCAATTCATGGGGAAACAGCAGCATGTGTGTTGGGAATGACCCATGTGGCTTAATTTCAAACTTTGCTTTTTGAAGATAGAATTATGTCATACTTTTTGTTTAActattaaatataataaatcaGGCCATGCACACAGGAACAATTTAaatgctttttcatttttaagtctGGTTTGGGCCTCCATATATCACTTATTTTCATCACAGTggtaatatatacagtacattatagCAACAATGCAAGCAGTAAAAtacatattgtatatttttgtacATAATGTTGTAAATAATATTGAACACTTTGTTATGAAAAGCTTGCTACTGTTGCCTTTTTCATTAACATTTCTAATACATTGCCAGCCATATGAAGAGCAATATAAGCAATAAGCAGATGCTGAAACAGATTCTGCATGCAAAACATATATATGTCACatcaagcttttatttttataaaggaAAAACAATAATTCTAGTACATTCATATGTTTGTAAATATTGTGTATGTAacaaattgttgtattttatactGCATTTCCCAGCTTTTgtttatagatatatataaatgGACCCTGGCTGGCCAGGAATGTGCATGGCAAAATCACAATAAAAACACTTGGATTAAATtcaaa

Function

NR:

description
PREDICTED: cysteine-rich secretory protein LCCL domain-containing 1-like

GO:

id name namespace
GO:0005576 extracellular region cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814939.1 False 3554 mRNA 0.44 15 11055838 11072879
XM_039814940.1 True 3685 mRNA 0.44 16 11055838 11094619

Neighbor

gene id symbol gene type direction distance location
LOC120568748 LOC103355153,LOC104929170 coding downstream 12097 11006879 ~ 11043741 (-)
col15a1b NA coding downstream 59249 10922568 ~ 10996589 (-)
pappa2 pappa2 coding downstream 194230 10755896 ~ 10861608 (-)
map4l LOC103364124,LOC102200499,LOC102297845,LOC108238623,LOC107384193,LOC102781692,LOC104942656 coding downstream 1267618 9674884 ~ 9788220 (-)
fitm1l LOC103375111,LOC104934817,LOC102294302,LOC101483423 coding downstream 1492097 9551992 ~ 9563741 (-)
ctnnd2b ctnnd2,LOC101475998,LOC102313221,LOC100711149,LOC102780722 coding upstream 56808 11151427 ~ 11321003 (-)
zswim5 zswim5 coding upstream 296265 11390884 ~ 11462612 (-)
LOC120568667 LOC101071843,LOC104929975 coding upstream 405745 11500364 ~ 11501738 (-)
selenop2 LOC103369579 coding upstream 424850 11519469 ~ 11524837 (-)
si:ch73-382f3.1 LOC104929977,LOC103369580 coding upstream 433224 11527843 ~ 11530805 (-)
G113553 xrn1,LOC103355159 non-coding downstream 143661 10911500 ~ 10912177 (-)
LOC120569033 NA non-coding downstream 644508 10410527 ~ 10411330 (-)
LOC120569031 NA non-coding downstream 677037 10372699 ~ 10378801 (-)
G113457 NA non-coding downstream 1015953 10039657 ~ 10039885 (-)
LOC120567726 NA non-coding downstream 1142172 9906924 ~ 9913666 (-)
G113627 NA non-coding upstream 24383 11119002 ~ 11123476 (-)
LOC120568658 NA non-coding upstream 229987 11324606 ~ 11329834 (-)
G113653 NA non-coding upstream 263115 11357734 ~ 11403230 (-)
G113656 NA non-coding upstream 270752 11365371 ~ 11367604 (-)
G113667 NA non-coding upstream 329565 11424184 ~ 11446271 (-)
LOC120567758 NA other downstream 166886 10887007 ~ 10888952 (-)
brinp2 brinp2,LOC103369811 other downstream 788760 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 1545341 9400787 ~ 9510497 (-)
chd7 chd7,LOC103370133,LOC102782711 other downstream 1860966 9114384 ~ 9194872 (-)
G113070 NA other downstream 2265796 8780452 ~ 8790042 (-)
G113805 NA other upstream 1123443 12218062 ~ 12218267 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other upstream 1506561 12601180 ~ 12608569 (-)
LOC120568934 LOC104956577 other upstream 1666129 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 1871847 12966466 ~ 12975328 (-)
G114152 NA other upstream 1989942 13084561 ~ 13088563 (-)

Expression


Co-expression Network