LOC120567859


Basic Information

Item Value
gene id LOC120567859
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11077232 ~ 11078874 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814941.1
TGTTCAGGGACAgcctgtcagacacacacagctactgtTGTCCTGtagtcttgtttttgttttttttagcagaaACCGTTCTTATCAAATCTCCTTCAACTGACGAGTTAATATCAAGATGGGGAACACGCATTGCCCTCCTGAGGACGCAGCCCACCTGGCCTCTATTGCTCGAGACATCTGCCCTTTCCCAAACTACAACCCCAATCCTCTTTTCTTCAACATGCTGTCCATCAACTCTTCACTTCACCTGAGGAACCACTACACAGCAGTGCAGTCCTCCCTGACCCCCAAGCAGCTGGAGGACTTCACCCAGGGCCTGAGGACCACTTTTGGCAGGGAGGGCAATGTCACTCTTGGCGGGGTGGGGGTAGTGGCCCTGTCCCTGGCAGTACTGTTTGACACTCTTGCCAGACAGGTCAGGGGAGAGTGGGTGTCCGAATCAGGGCCCATTCCAGGTTTATTTGTCAAAAACCTGAGAGGGTACTACCCAGCGCATGTCTACACAGCCAGTGAGTACCTGAAGCTGGTACCCCACATTGCAAACAACCCTACCAGGATGATAGAGGAGTCAGAGAGGTACCTCAAGCAGTTAGTAATCGATCACCAATCTTGGTGGAACAAGTTGGTAGAAAACCACACAATGCCGATAACAGATGACACCACAGTAGTCAATGTGATGATGGGACAACTTTTTGCAGTCAGTTTATCCCTTCACCTAGGCCGCATCACAAATTCTACGGGTAATCTGTCGGACCACAATGACAAACAACTCCGTAGAGATGCTATTATCTGGAATCTCAACTGTGACCTAGAGGCTGCTGACAAAGAATTTTtggttaaagtaaaaaaatctgACAAACGCACCCAAGAAGCTTTTGAAAGCTGCACGCCAAAGAGTGGATATGTACCACAGACATGGCTGCAGTATGTAGCCAAGCTAGTATTGGCAGATGtcctgttcctccctctctataCTGGATATACAACTGATGATTCAGCAATTGCTCACAGAGAAGATTTTGATCTAAAGGCCGATGCACTCGTAAAATGGGTAGAGTAAGAGTAGTTCACTGGCCAATTTCCCATAAAATAATCCTATATTAGTCCCACAGCAGGGGAATTTACAGCtagaaagaaaagtaaaagataaaagatagtatagtagtaatataaaagaaatcaatcaatcaatcaatcaaaatcaaGACAAGATATATAAAGTGGAACATGAAACTGTTGGAATACATAAAGCTAGATTAGCCATTGATAAAATGTGCATAGTCATAATGCAGGGATAACCAGGCAATATATAGGACAAAAGAGTCAGAATGTGATCAGTCATATAGTTTCAATGTTATCTGATGTAGTGTTCTTTTTTCCTACTTGTTAATCTGCTTGTTAGTTTGAACTGTAAACCATCTTGTGTTTaaacctatttatttattttttttaagattttttttggggcattttaggcctttatttgacaggacagctgaagacatgaaaggggagagagaggggggagtga

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814941.1 True 1534 mRNA 0.43 2 11077232 11078874

Neighbor

gene id symbol gene type direction distance location
xrn1 xrn1 coding upstream 159727 10892377 ~ 10917505 (+)
cop1 rfwd2 coding upstream 195580 10868042 ~ 10881652 (+)
astn1 astn1 coding upstream 211850 10298706 ~ 10865382 (+)
klhl20 klhl20,LOC106569069 coding upstream 1236454 9826159 ~ 9840778 (+)
LOC120567595 LOC104937197,LOC103364125,LOC101484549,LOC100690053 coding upstream 1253527 9816589 ~ 9823705 (+)
LOC120567857 LOC103355151,LOC102312891,LOC104961060,LOC101474626 coding downstream 4989 11083863 ~ 11095487 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding downstream 17903 11096777 ~ 11100216 (+)
LOC120567856 LOC104929871,LOC103355149,LOC100690953,LOC102207159 coding downstream 21404 11100278 ~ 11123475 (+)
LOC120567621 LOC103360515,LOC104929875 coding downstream 49145 11128019 ~ 11139884 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding downstream 267571 11346445 ~ 11364696 (+)
LOC120567863 NA non-coding upstream 21426 11046556 ~ 11055806 (+)
G113498 LOC104957117 non-coding upstream 148989 10926456 ~ 10928243 (+)
G113492 NA non-coding upstream 189565 10886992 ~ 10887667 (+)
LOC120569030 NA non-coding upstream 234012 10840517 ~ 10843220 (+)
LOC120569032 NA non-coding upstream 238129 10837503 ~ 10839103 (+)
G113619 NA non-coding downstream 440426 11519300 ~ 11524768 (+)
G113620 NA non-coding downstream 446104 11524978 ~ 11525250 (+)
G113621 NA non-coding downstream 447137 11526011 ~ 11579470 (+)
LOC120568871 NA non-coding downstream 504030 11582904 ~ 11694250 (+)
G113682 NA non-coding downstream 505562 11584436 ~ 11584636 (+)
LOC120568835 NA other upstream 190754 10885595 ~ 10886478 (+)
G113130 NA other upstream 2074664 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 2174385 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2251421 8812897 ~ 8825811 (+)
LOC120568415 LOC103370799,LOC104931865,LOC101476899,LOC102794599,LOC102300092 other upstream 2267773 8789209 ~ 8809459 (+)
pkia pkia,LOC102780447,LOC102205080 other downstream 253694 11332568 ~ 11346225 (+)
abhd4 abhd4 other downstream 1043795 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 1078575 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1503768 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 1822665 12901539 ~ 12907243 (+)

Expression


Co-expression Network