LOC120567872


Basic Information

Item Value
gene id LOC120567872
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1433235 ~ 1435275 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814966.1
TCAGGAAGAGAGACTCAGATGAGCGTTGTCACTGAGAACAGAAATGGCGCAGAAAGGACTTCACCTGGACATGGAAAATTTCTCctgttccatctgtctggatctatTGAAGGAGCCGGTGActactccctgtggacacaactactgcatgaactgtattaaaagccactggGATGGAGAGGATCATAagaacatccacagctgtcctcagtGCAGGCAGATgttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggtCTGTGATTTCTGCACTGGGAGAAAACTGAAAGCACACAAGTCCTGTTTGATGTGTCTGATGTCTTACTGTGATAAACACCTCCAGCCTCATTATGATGTTCCTCAactaaagaaacacaagctggtggagccctccaagaagctccaggagaacaTCTGCTCTCAtcatgatgaggtgatgaagattttctgccgtactgatcagcagcttatctgttatctctgcttaatggatgaacataaaggccacgacacagttccagctgcagcagaaaggactgagaggcagaaaaagcTCAAGGGGAGTCCACTAAAgatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggTGGAGGCCATGAATCTCTCTgctgataaagcagtggaggacagcgagaAGATCTTCACTGAGCTAATCCGTCTCatggagaaaagaagctctgatgtgaagcagcaggtcagatcccagcagGAAAGAGAAGTGAGTCGAGTCAAAGAccttcaggagaagctggagcaggagatcactgagctgaagaagctctcacacacagaggatcacaaccAGTTTCTAAATAACTACCCCTCACCgtcaccactcagccaatcagcatccagcATCGATGTCCgtcctctgagctgctttgaggacgtgatagcggccgtgtcagaagtcagagataaactacaggaTGTCCTGAGAGAGAAGTGGACAAACTGctcactgacagggactgaGGTGGACGTTTTAGTGCCACAACCAGAGCCCAAAACCAGAGCTGacttcttaaaatattcacgtgacatcacactggatccaaacactgcaaacacacatctgttattatctgatgggaacaggaaagcaacatATATGAGACAACATCAGCTttattctagtcacccagacagattcactgTATGGcctcaggtcctgagtagagaggGTCTGACTGGACGtggttactgggaggtggagaggagaggggaaggAGTACAtgtagcagtcgcatacaagaatatcagcagagcaggggaggattgtggatttggagaaaatgacaaatcttgggcATTTGATTGTGAGAATAATAGTCATTCATTTTGGTACAACAATGTCCAAACTCCCATCTCAGGTCCTgtgtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCGGGACTTTATCTTTATTATGGACACACAGCTGAGTtttgtaaactgaaatagacagaagtcatttaagggttaatCTCTGTGTTTTAACTCTTCAACTTATTcagtctccatgtttgttgctgAGAGCTGATTGGTGTGGCATTTCTTCACTGCACAGAAatcagctgtcagtcaaacattatgggatgtcctttgacatcttgtcattagttgttgtgtaaatgtttgagATTCTTTAGGTGATGCTTCTTCCTGTGTCTGTTTAGCCACGGAGGCTATCACTGCTCATGATGATGTTTGTTGACCTGAACTGAGAATGAAAACTTCTTTGCTCTCTAAATGTTTGattaatatttgtatcgatgtatttgtatgttgttgtttctcTTCCACATCATGGGTCTGAAGAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814966.1 True 2041 mRNA 0.46 1 1433235 1435275
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120568025 LOC103365692,LOC101173737 coding downstream 4921 1415156 ~ 1428314 (-)
sft2d3 sft2d3 coding downstream 227694 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 296684 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 379575 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 532039 895507 ~ 901196 (-)
LOC120568497 NA coding upstream 321346 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1083576 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1190563 2625838 ~ 2662765 (-)
lamc2 NA coding upstream 1268084 2703359 ~ 2728546 (-)
LOC120568009 NA coding upstream 1414750 2850025 ~ 2852388 (-)
LOC120568021 NA non-coding downstream 59610 1372855 ~ 1373625 (-)
G111222 NA non-coding downstream 84933 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 110581 1265661 ~ 1322654 (-)
G111213 NA non-coding downstream 139097 1289992 ~ 1294138 (-)
G111201 NA non-coding downstream 201820 1231017 ~ 1231415 (-)
G111235 NA non-coding upstream 35824 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding upstream 62487 1497762 ~ 1497967 (-)
LOC120567885 NA non-coding upstream 89399 1524674 ~ 1526105 (-)
G111245 NA non-coding upstream 114506 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 211898 1647173 ~ 1660408 (-)
G111226 NA other downstream 15276 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 23707 1391808 ~ 1409528 (-)
dhx9 dhx9 other downstream 42697 1353022 ~ 1390538 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 118390 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 319053 1100064 ~ 1114182 (-)
LOC120567890 NA other upstream 308025 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 906187 2341462 ~ 2405093 (-)
G111573 NA other upstream 1138029 2573304 ~ 2578014 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 1462940 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 1769012 3204287 ~ 3229147 (-)

Expression

LOC120567872 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 0.5.
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LOC120567872 Expression in each Bioproject

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LOC120567872 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 5.
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Co-expression Network