LOC120567909


Basic Information

Item Value
gene id LOC120567909
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22815966 ~ 22824647 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039814977.1
GCTGGTGAGCAATCAGACAGAGGGGACCGCCTATCGCTGTAAAAGTTCTTCCTCCACTCCGAAGGGTCAAAGTCTGTACGAAACCAACGACTACAGTCAAAGGCAGATTTGACGCGATTTCACCTCAAGAGGCGGATTAATAAAGTTTACATTTTCCAAGCCTGATGGCTCCACTGCTGAAATGCAGCCTTTTTATTCTGCTGGCGTGCGTAATAACGCTCGTTCCTGTGGAGGCAGAAGGAAAAGGCTTTCACAGACAGAAAAGAGAATGGATCATAGCTCCCAGACAGCTCGTGGAGAACCACGATTACACAACCTTGGATCATATCGCTAGAATTCGCTCTGATAAGGAGAACTACACCACAATATGGTATTATCTATCGGGGCCTGGTGTTGACCAGTCCCCTGTTGGTAGATTTGCTATTGACCGTGACACTGGCTTCGTGAAAATCTTTTCCATTCTGGACCGAGAGGAGATATCCTCCTATCATTTACGAGGCTTGGCAAAATTCACTGATGGGACCCTTGCTGAAAAGGATATTGACCTTTATATTACTGTTTTGGATGTAAATGACAACCCACCGATCATTAAAGTACAGCAAGTTGGATATGTCAATGAATCAAGTGCAGCAGATACTGTTGTGATGAAAGTGATAGCAACTGATGCTGATCAAGAGAACACACCCCACTCCAAGATTTCCTACAAAATTGTGGGGCAGAGTAGCACAGCTGGGATGTTCTCCATCATCTCTGAAACTGGAGAGGTCATTGTTCGACAAAGCACTCTAGATAGAGAGacacagGATACATATACATTGACTATACAAGCATCAGATATGGGTGGAAAAGACGGAGGACTGTCAGGAACCGGAGAAATTGTGATCAAAATTCTGGACATAAATGACAATATTCCAACCCTGGAAAAAGAATCGtatGAAGGGAGTGTGCAGGAGAACACTATCAATGTAGAAGTGATGAGGATCAAAGCCGTTGACATGGATCTGATTTACACTGAAAACTGGCTGGCTGTATATGAAATTGTTTCAGGGAATGAGGCAGGCTATTTCACTATCACTACTGATAATCGGACCAATGAGGGAATTATCATGATTCACAAGGCCTTGGACTATGAGGAACTAAAGACGCTCAACTTGGAAGTGGCTCTTTCTAACAAAGCAGCATACAATTTTGGCAGTGGGATGATGACTGGGCCTATAATCCCAAAAACCTACCCCATTAAAATCAATGTGATCAATCAGAAGGAAGGCCCCCGATTCCAACCAAGTGTCAAAGTGGTGACTATCTCTGAGGACCAGTCTTCTGTCTTCATCAACAAAGTTATCACTACCTACTCTGCTATTGACAGTGACACACTAAAAACAGCCACCAACGTAAGGTATGCTAAATTCAAAGATGAGGGCAACTGGTTGATTGTTGATGAGAAGACGGCAGAGATCAAGCTGAATAAGCTTCCTGACAGAGAGTCCAAGTTATTGATCAATGGAACATATTATGCTGAAATTATATGCATCTCCAATGATGATTCCTCAAAAACTGCCACAGGGACTATAGCCATTCAGGTGGAGGACTTTAATGATCACTGTCCGAAACTGACCACTGCAATCCAGACCATGTGCCTCGAGGATAGTGTCATCTACGCCACAGCCATAGACGAAGACAAGTTTCCCAATTCTGCACCATTTGAATTCACTGTGATTCAGGGGAGCAGCCAGGGGGGATGGAAAGTGGAGTATCTTAATGAAACCACAGCCATTCTGCGAGACCAAGCCAACTTGTGGCCAGGCACATACAAAGTGGCATTGGAGATCAAAGACCAGCAGGGAAAGTCATGTGCTGATGTTCAGATGATGGACGTAATTGTGTGTAGTTGCCATGATGTCACTAAAACCTGTACGCAGCGCACTGCAAAGACTGTGGATTTTGGAGCTAAAGGTGTCCTGCTTCTGCTCCTGGGACTGCTGCTTCTGCTATTGCTGCCCCTTCTGCTGCTGTTCTGCCTGTGTGGAGGTGCAGCAGCTATTGGAGATTTCAAGGCCATCCCATATGATACGAAGCAACAGCTCATCTCATATCACACTGAGGGACAGGGAGAAGACAAGGAAGTACCTCTTTTACATATCCCAGTGGAAGTTGATGGTGGCACAATGAATGCCAAAAACATCAACACCTATGAGGGAAAGGGGAACTTTGGAGAACTGAATGAATTTGGAGCTGCAGCAGGGGGAGACGCAGCCTTCGGCAGGGGCCTAAATACTTTCACCATGACAGCCGAGGACATGCGCCTCTACAACCAATATAACCATTCCGGTTGGCAGGGGGGCTTGGACTACAGTAATGCTGGGATGATGACAGGACAAGAAAATAATTTCTCCCATTACAGGGCTGGGGCCTTTGATGGGATGGCTCTATCTGATCAGTTCCTGGAGGAGTATTATTCAAGTaAAGCCAACCATGCTGCACACCAATCCCAGCAAAAGGACGCTCTGCTGGTCTATGACTATGAGGGTAAGGAGTCCCTGGCAGGTTCTATAGGTTGCTGCAGCCTTCTTGAGAATGATAATGACCTTGCGTTCCTCAATGATCTCGGGCCTAAATTCAAAACCCTGGCTGAGGTTTGTCAGGGGTCGACCTTGGTAACGGAGTCTGTGGATGCAGagctttctttctctccaccCAGACCAGTGTCTCCTGTCCGGCCCTCCACCCACACATATGTCCATACTCACACAGAAAAAATCAGGGACAGGGACCACGCCAACATCAACACCCTCAACACCTCCAATGTAGCGTCTGGATCCTCCACCATTGTGCATGAGGAGAGAATCACTGAGAGAGCCCAGGGTTCAGCCACCGTTCCCACCGTACACATGTCAAGTGAAACGCTGGCATGTCAAGGTGTTTTTACCAGGGCACCAACCCAGGCAATGAGTCAAGTAGGCCAAGTTGGGCTAAGTCAGGGGCTGGTGCAGGTTGGTGGCCTGCAAAGTGGTCAGGGGATGGTGCAGGTTGGTGGCCTGCAAAGTGGTCAGGGGGTGGTGCAGGTTGGTGGCCTGCAAAGTGGTCAGGGGATGGTGCAGATTGGTGGCCTACAAAGTGGTCAGGGGCTAATGCAGGTTGGTGGCCTGCAAAGTGGTCAGGGGATGGTGCAGGTTGGTGGCCTGCAAGGTTCTCATGGTGTGGTCCTTGTAGATAGGCAAGTAGGAATGGGTGGAGTGACAGGGCAGGTAGCACAAGGCCATTCACAAGGAACCCACTCCAGGTCTAGACAGGTGTTAGTGGTGGAGAACGGGTCCTCAGGGGGAGAGCAAGGTGCACACTTAGCACAGGGCTTTGTTCAGACAGGACATAGGTCTGCAGAGCAGGGTTTGGAGGTAAGAGGTCAAGGTTTGAATGTTCAAACTGAGAGTTTTTCACTGGGTTCACGCGGTTCTGCGGGATCAAATGAGGACTTTACTGTGACAGCCACACCCAAATTGAAAGGAAGCCAGAGAGTGGTTGTGCAACGTAAGAAGGTCTCTGTCACTGAGAGGAATATTGAATCTAGTACAAGGGCGTAAAGCAGCCCTTTTGTTTAGCATATACACTAGTCACACTAGTTTAGATATATACTGAAATATATTTCAGTATACTAAAATATACTACAGTatgtaaatacatacagtagatgGCCATACAGATAGATATTGTGATAACTTGTGGTAACCTGGTAAAAAGCATACTTTAGTCTGCTTAACCAAAAGGGCAATACTGTTTGTTCACATCTAGTGATAACACTACTGCTCAGTGTAACACATGGCATTGACTACATGACTATCATGGCCATAAAAAGCATTGCATGTCCAATACTTAGCAAAATGTAATTCCCCTCTTTCTCTAGTCCCAAGAATGCCCATTTAAGCACCAAATGACTTAAAACCATTCAATTTATTTCAGGTAGAAAACTGCATGGCTTCAGTGCAGGAACAGCCAAAGTAAATATAACAGAACTTTATAAACAAAAAGGTTACCTGCCCCTACATGTCCGATTACAGCTATATGCAAGTGTCAGATAGATGCTCCTAAAGGCTCGCAAGGTTATTATAATGGATGCAAAATCATAGCACCTGACAAATAATCATGTCACTGGTACGGATTAATACTCTTAATAAACTGTTATATATACACTATGATCACTCTGTCCTGTGGGGCAGATACAATCTTACTTATTGCTTTTCTAGATTAGAACAACACAGCATAGAGCTCTTCAGTCACTTGCCTGTAAAAATTACTCTAATTATACCGTAAATTGTTAGTCTGAGAAGCACAATTATTTTGAGAGTGACTAAAGTCTAGGTATAACAAAGTAGTTACTATAATGTTGCATGTATCCATATAGGCTTGGAACAGTGCTCTGGGTACTATATTTTCATAGTGTGGTGTGATGTAAAAATGCTTTGGTTGCATTTTGGAATATTTTAGCTTCCGCCATGCCATAAGCCGTTCTGCTGACCTTTTAGATTGCTGAGTTATACTGGAACATAGATAAATGCTGTTTGTAATGTACAAGTGATGAAAGCACCCTCTGCAGAAGAACCAAAGTGTTTGAATGATATAGTGCACCAAGAAGGGAGTAGACTGTTTCAGTATCAGTAGACAATAAAGTCATCAGACTATAAGCCAAAGAAGAGAATACTGCACAAA

Function

GO: NA

KEGG:

id description
K07597 DSG2; desmoglein 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039814977.1 True 4701 mRNA 0.45 15 22815966 22824647

Neighbor

gene id symbol gene type direction distance location
LOC120568106 dsp,LOC104949487 coding downstream 58352 22739634 ~ 22757614 (-)
LOC120568657 tns3 coding downstream 77718 22703464 ~ 22738248 (-)
LOC120569075 LOC104929330,LOC103371151 coding downstream 121291 22689074 ~ 22694675 (-)
LOC120567969 LOC103368948,LOC102290339,LOC102784041,LOC100706175,LOC101476947 coding downstream 193088 22576333 ~ 22622878 (-)
phlpp1 LOC103368950,LOC101477421,LOC102207086 coding downstream 242159 22525261 ~ 22573807 (-)
psma8 psma8,LOC102789190,LOC101062730 coding upstream 347411 23172058 ~ 23177122 (-)
LOC120568995 hrh3,hrh4,LOC103143019,LOC103479572,LOC102223873,LOC108239625 coding upstream 488720 23313367 ~ 23317690 (-)
LOC120568611 lama3 coding upstream 538382 23363029 ~ 23421777 (-)
kmt2cb NA coding upstream 668316 23492963 ~ 23571363 (-)
arhgap21b NA coding upstream 858088 23682735 ~ 23724031 (-)
G117112 LOC104949490,LOC101162245,LOC103371147,LOC108239677,LOC107092425 non-coding downstream 6213 22807072 ~ 22809753 (-)
G117055 LOC104929332,LOC102785373,LOC100706434,LOC102205468,LOC106925933,LOC103142996 non-coding downstream 141516 22670733 ~ 22674450 (-)
G117052 NA non-coding downstream 183698 22629896 ~ 22632268 (-)
LOC120568857 NA non-coding downstream 609975 22181964 ~ 22205991 (-)
G116954 NA non-coding downstream 614986 22195324 ~ 22200980 (-)
G117117 NA non-coding upstream 726 22825373 ~ 22825583 (-)
G117114 NA non-coding upstream 8419 22833066 ~ 22834881 (-)
G117119 NA non-coding upstream 11408 22836055 ~ 22865958 (-)
G117137 NA non-coding upstream 135868 22960515 ~ 23110187 (-)
G117148 cdh2,LOC102787731,LOC102201754,LOC101473079,LOC103371087 non-coding upstream 197578 23022225 ~ 23089827 (-)
G116969 NA other downstream 547407 22261998 ~ 22268559 (-)
higd1a higd1a other downstream 1805390 21008048 ~ 21010576 (-)
tmie tmie,LOC102776014 other downstream 1820399 20984801 ~ 20995567 (-)
xcr1b.1 NA other downstream 3020207 19793342 ~ 19795759 (-)
G116138 NA other downstream 3350586 19464700 ~ 19465380 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 521071 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 605719 23430366 ~ 23430992 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other upstream 643973 23468620 ~ 23491612 (-)
LOC120568990 LOC101487892,LOC104941256 other upstream 1026426 23851073 ~ 23856621 (-)
G117560 NA other upstream 1674733 24499380 ~ 24536496 (-)

Expression


Co-expression Network