LOC120567921 (LOC103362241,LOC104934209,LOC101483427)


Basic Information

Item Value
gene id LOC120567921
gene name LOC103362241,LOC104934209,LOC101483427
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13038890 ~ 13045691 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815019.1
ACGTGTTTCAGGAAGAAGTTGGCGCCTCAAGCCCCGTATGCGGTTAGCTAGCACGCTAACCGAAAGTATAAAAGATAGTCCAGTGAAATGATTTTTCTTTCTATCGTTATTAAAGAATTCCAAAATGAACGACGCGGAATTCAGTGTCCCTCTGTCCTCGCTGGCACTCCTGGTCCCACCACTTCGGCTGATGTCAGCAGTGATGTGGGAAGTGGTACGCCAGCGGAACATAAAGCACTATGGGAAACTGGAGGAGTTTGTGTCTATGGTAACAGATGCAGTTCCTGAACTGATGAGTAAAAGAGAAGGGAGACTGCTCTCACTGGGCCTGAGAGCAAGGACAACTCTTGAGCTGTTGCGCTCTGAACACCCTGAAGATCTCAAGGCCGTTGAGAGCCACCTCAACCGAATACGATCTTCTTGCATTGAGGAGACCAATGATCCTGTCATTGAGGCACCAGAGGCGAACTTTATGAAGCTGGTGCAAGGCCTCATTGAAGACACTGATGGTAGAGAACACTTCCTCAAgAATGTGTTTCCAGTGGAGTATGGCCCTGACTTTGACACAGCACTGGAAACTCTGGTTTGTGAATTCTTCACCAGACTGGAGGAGCTGCTGCCAATACCAGATTTCAAACAGACTGCATCCTGGATCAGTGCTGCCCCCTCTGTCCTAGAGGAGTACATGCAGTGTGTCTCAAATGGAGAGGACCTCAGATTTCTTCTCCAAAGCAAACAGTGCCACGGGAAATTGGCTAAGAGTAGTGTTGCTCCGTTTCAGTCAGATGATCTTCTcattccctctctgtctcttcctccatCGCTGGAAGTGGCCATCGCTTCCCACCCGAGTGCTTGTGACGACGAAAATAACGACGTTCCTCAGATTGTCATGTTCGATGAAGAACTGTCTACAAACCCTTCCACCTCAACTGACTTTCCTGAATCGCCAAAAAGGACAGATATCTCATCATCTCCTCGCAGGAGACAGCAGTCAGGGATGCATAAATGCCCCGAGTGTGACAAATGCTTCAAGCATCACTCTGTCCTCATCGAACATCAGAGAGTCCACAGTGGGCTACAGCCGTACAACTGCTCCGAGTGTGGGAGGGCTTTCAGGACAGCCACTCTGCTGGCCGGCCACAGGCTACGGAAATGCAAAAATGCTGCATATCTGTGCATTAAATGCGGGAACAGTTTTCCAACCTCACTAGACAAATTCAGACACCACTGCCCAAAACGGGGCCGTAACTACGACTGTGCGCACTGCGGAAAGAGTTTTCAAAAGTCTAACAGCTTAAAAGAACACCTGCTAACTCATGTCCAAAGCCGCCTCTTCAAGTGCAGCCATTGTGGGGTAGGTTTTTCAGGAATTGGTGACTTAAAGTATCATCAGCAGGTAGATCATGACAAACCTTATCAGTGTAAGCAGTGTGGAAAGAGCTTTATCTCCTCCAAGTGTCTGACCAAACATCAACAACGCCACGAAGAGGTTGGCGAGATGGAGCCCGCCAAATTAATGAGTGGAGGTAAACATAGGAAGAGTGGCTCCGCTTATCGGACTTCCTCGGCATCTATGTCCTCCAGGAAAACGTCTGTCAAAGCGGTCTACCCACGAGGACGAGTCACGCATAATTGTCCACTGTGTGGAAGGAGCTTTAAGTATCGTTTTGAATTCCTCGAGCACCAGAGGTTCCACACTGCAGTGAAGCCTTACAAATGCTCTCAGTGTGGTAAAGCCTTCCGCACAGAAGCTCACCTCTCCAGGCACAGGAAGAGAAAGTGTAAAAATGCTTCCCACATTTGCACCAAGTGTGGGTGTCAGTTCAGGTCTCTGCACGAGCGGGTCAGGCATCAGTGTGTCCAGCTCCTGACAAAATACGAGTGTTCTCATTGTGGAAAGACCTTCAAGATGGCCCACCTGCTGAGGAACCATCAGCTGAGTGAACACCAGCTTCCCTACAGCCCCAACCATCGCTTCAGGTGCAGGTACTGTGATGAGACTTTCCCAGGCATCAGCGAGCTTAAGTACCATCAGGGAGTTGACCACGAGAAACCCTATCAGTGTCAGGAGTGTGGCAAGTGCTTCCTGTCCGAGAAATGCCTGGCCAACCACGAGCTGCGCCACAGCGACGACCGACCAGAGAGCTGTCTCGTGTGCGGCCGCGGCTTCAGAAACCGCTACGACTTGAAGCAGCACATGCGCACTCACACAGGAGAGCGACCTTACCAGTGCACTCACTGTTCCCAGTGTTTCTCCACAGCAGGAGGACTGAGGAGCCACACCAGGGTTCACACCGGCGAGAAGCCGCACGTTTGCCCAGATTGTGGTAAGGCTTTCTCCCAGATGGGTGCAATGCGCACCCACAGGCTCACCCACACAGGAGAAAGGCCATTCAAGTGCACCGTGTGTGGCAAAGGTTTCACAATGGCACACAAGGTGACGGTTCACATGCGTGTGCACACAGGAGAGCGGCCGTATGTGTGCTCTCAGTGTGGGAAAGCCTTCTCAGATGGCAGTGTGCTGAAGCAGCACATGCTGAACCACTCAGGGGTGAGACCATACCACTGCCAGATCTGTCCCAAGACCTACACCTGTCTGAACCACCTGAGGAGGCACCTGAAAAGCCACTCAAACATGAACTGAGTCTGTCTTGAAGGCAAACGAGcagaacattttacacacataGTGACACACTGCATTTGAAGGTAACGCTACTACAGTTGCGATGGACCAACTACACCAAGCAATACATGAAGGAATATAGAATGATGCTGTACAGTTGCTGTGGAAATTGAGGTGAAAAGTTTCCTCTTTACTGTGAAGTAAATGTAGTCGCATTAGCCAATTGTCAAGGACTGTGtgaacatttaaaggaatagtttgacattttgggaaatgcacttATTCGCTTTGTTGCTGATCATtcgatgagaagattgatacagTCTTAATGTTTCTGTCCATTATTAAGCTGGAACCAGGAGActcttagcttagtttagcacaaAGATTAAAGTGAGGGGGAAACGGGTAGCCTGGCTCTGTTAAAAGGTATGTGAAATGTGCCTGGCACTTATTAAACCAGTTAGTTGTACagataaaaacaagaaaaaaacaagatataacatgcTAATTATTGGGCTTTGTTAGCTGTAGTTTCATGTTGAATGGAAAGATATGAGAGtaatatcaatcttctcatctaactcagcaaggatgtaaatatttacaaaatgccAAACCCTTTCTTTAACATCTGCACAAGCTCGTTCTTTCCCCTCATTCCTCACAAGGCTTTTCCTTGAGCTTTTTTATTCTTGCATCAGTTTCTTATGCATGAATATGTTTGGATGCTATTCTGGATATTATTTgggtgagatactgtatgttcagAAGCTGTAATATTGGTGAAATTCTATTTTTTGGAAAGGCCTCAGTAATAGAAATGAAAATGTTGGCTCTCTGTAAATATGCTGAAAGACAAATATTTTGAGAGtgcaaaagttaaaatgacGCCATTATTTCAACATGACATAACTTTATTCATGTAGGCCTTTTATATCCCTCACTATGGTTTGCAAAGTTTGTGAatttcaaattaaattacattgGTTATACCTTT

Function

NR:

description
PREDICTED: uncharacterized protein LOC103362241

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815019.1 True 3626 mRNA 0.47 7 13038890 13045691

Neighbor

gene id symbol gene type direction distance location
LOC120567922 NA coding upstream 1078 13033439 ~ 13037812 (+)
LOC120567919 LOC104962026,LOC103362208,LOC102293788,LOC102208917,LOC101474809 coding upstream 12959 12979093 ~ 13025931 (+)
gorasp1a gorasp1,LOC103360281,LOC104945829 coding upstream 72328 12961268 ~ 12966562 (+)
oxsr1a LOC104927954,LOC103360287,LOC100697833,LOC102210831,LOC102290626 coding upstream 137465 12888543 ~ 12901425 (+)
ctdsplb LOC103360289,LOC102790982 coding upstream 169748 12855102 ~ 12869142 (+)
col6a2 col6a2 coding downstream 36052 13081743 ~ 13096416 (+)
zgc:162816 LOC103362211,LOC102298354,LOC107097021 coding downstream 55711 13101402 ~ 13105801 (+)
orc2 LOC102787487 coding downstream 61008 13106699 ~ 13112264 (+)
pecr pecr coding downstream 72878 13118569 ~ 13122673 (+)
si:ch211-227n13.3 NA coding downstream 113325 13159016 ~ 13163518 (+)
G114000 NA non-coding upstream 10720 13027079 ~ 13028170 (+)
G113956 NA non-coding upstream 164580 12861625 ~ 12874310 (+)
G113938 NA non-coding upstream 259492 12778340 ~ 12779398 (+)
G113852 NA non-coding upstream 411371 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 435968 12601183 ~ 12602922 (+)
G114008 LOC104953400 non-coding downstream 106408 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 150570 13196261 ~ 13198734 (+)
G114035 NA non-coding downstream 154077 13199768 ~ 13200746 (+)
G114037 NA non-coding downstream 159134 13204825 ~ 13207023 (+)
LOC120568783 NA non-coding downstream 205060 13250751 ~ 13254585 (+)
G113979 LOC104959684 other upstream 63253 12929215 ~ 12975637 (+)
LOC120569010 NA other upstream 78541 12952548 ~ 12960349 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other upstream 119692 12911439 ~ 12919198 (+)
LOC120568152 LOC104963178 other upstream 131647 12901539 ~ 12907243 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 439050 12582642 ~ 12599840 (+)
rpl37a rpl37a,RPL37A other downstream 68905 13114596 ~ 13117356 (+)
ndufb3 ndufb3 other downstream 77339 13123030 ~ 13125463 (+)
si:ch73-71c20.5 NA other downstream 137593 13183284 ~ 13186364 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 1241459 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1940086 14985777 ~ 14993083 (+)

Expression


Co-expression Network