LOC120567922


Basic Information

Item Value
gene id LOC120567922
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13033439 ~ 13037812 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815020.1
TAGTATTTGTCTTTTATGGACATTTGGAGTTTAGAGAGTTTCGTGGCGCAAAACAGGATCATGTGCAGATTTTGTGAGGGTCCCCTGCCCCTGTCCTCGCTGAGGCTCCTGGTTCCACCTCTGCGGGTGATGACGGCTGTGATGTGGAAGGTGGTTCGTCTGAGGAACGTCATGCATTATGGGAATGTGGAGGAGTTTGTGTCCTTGGTAACTGAAGCCATCCCTGACATCTTGACGGACAGACAGATGACACTGCTCACTCTGGGCTTAAGAGCAAGGATGACATTACAGATGTTAAGTTCTGACCAGTCAGAGGATCTCAGAGGTGTTAAAACACGCTTGAACAGCCTCCTGGCATCTAGCTCAAAACAGGTGCATCCGGGTAATGAAGATCTTGAAGCCAACTTTGTCAGGCTTGTTCAAAGACTCCTGGAGGACCCAAAAGGGAGAGAGCACTTCCTCAAGAATGTGTTTCCTGTGGAGTATGGGCCTGACTTTGATACGGCTCTGGAGACACTGATTTGTGAGTTATTTACCAAACTGGAAGAGTTGCTGCTTATACCAGACTTTAAGCAGACCGCAGTGTGGATCAGTGATACGCCCTCTGTGCTAGAAGAGTACATGCAGTGTGTATCCAAAGCAGATGACCTCAAAGTACTGCTCAGAAGCAAGGCCCACTGTGGTAAAACGACCAAGATGGATACCTGTTTGCCCTCTATCTCAGAGCAGCGGCTCTTCTCATCATTATCTCTCCCTCCTTCACTGCGAGAGGCCAACACCAAAGATGtagactctcacacacaaacatttcaaaaccaaAGAGAATCTGAGGGGATTTCTCCTCAGGACGCAGAAGACATGGCGATACAGGATGTGAGATGGAAATCTGAGGAGGAAACAAACATTCTGGACAGCAGCAATGCACAACAAACAACAGGAGGGAAATGCAGCGACAGCATTCCTGATGTTGTGGAGGAGTATGATGACGGAGGTTCAGGCACCTGCTGGGTTCCCTCTACATCTACTGAGAGTCCTGTATTGTCCAGCTCTAAGATTGGCCCTCCAAAGCAGAGAGTTGCACACAAATGCTCTCAGTGTGGAAAGTGCTTCATTTACCGCTATAAACTCCTGGAGCATCAGAGGCTTCACACCGGAGAAAACCCTTTCAAGTGCTCTCAATGCGGAAAGGCTTTTAGAAGGACCTCTGACATGTCAACTCACAGGCGGTTACAGTGCGCAAAAGCAGCTTATATTTGCATCAAATGTGGGAATAGCTTCCAATCAATACAGGACAAATTAGGACACCGGTGTGGTCATAGTGTCCAGAAGTTTGACTGTTCTCAGTGCGGAAAAAGCTTTAAGAAAATGCACTTGCTGAGTAGGCATGAGCTGACTCACACCCAGAACCGTAACTTCACGTGCAGACAGTGTGGGAAAGTGTACTCCAGTATGAGAGAGCTGAAATCCCACCAGAAGATTCATCCTCCGGAGCTGTCCAATCAGTGCATGCAGTGTGGGAAGTTTTTCAGCTCTGTTGCTGGTTTGACAGCCCATGAGCTGCGCCACAGgcaacagagaacacagatctGCGTGCGTTGTGACAAAGCTTTTAAGAACAAACATGACCTAAATCTGCACATGCGCAGTCACACAGGCGAGAGGCCATTTCAGTGCACATACTGTGGGAAATGTTTCTCTGTGTCAGGAAACCTGAACGTACACATAAGGACccacactggagagaaaccGTATTTGTGCTCTGACTGCGGCAAGGGTTTTGTTTCAGCCGGCGAGCTGCAGATACATAGACGCACTCACACGGGGGAAAAACCTTACAAGTGCACTGTATGTGAGAAGGGATTCACCATGGCAAGCAAATTGACAATTCATATGCGTGTTCACACCGGAGAGCGCCCTTACATCTGTCCTGAATGTGGGAAAGGTTTTTCACGTGGTGGCGAAATGAAAAAACATACCATGAAACATACGGGGGTGCGACCCTACGCTTGTCATTTGTGTGCAAAGACTTACACATGCCACAATCACCTGAGGAGACACTTGAAAACTCACAGTGTAGTGAAAAACCAGGCTGTCTAATTCCATTGATTACCATTGTCATTTTATCAAACTGATGTAGCGATGCAACTAGCCTGTACTGATTGCGGTGTTGACAGCATGCACTTTGTAATACACTCACCCTCTCTTGTAA
>XM_039815021.1
GTAGTGTTCAGCATTTGATTCATGTATTTGATACATAGACGAATAGCAGCTATTTTTGACTGCACGAGgacgtttttttaatttatttaagaaAGATTCCTCAGTGTCAATTCAACTTTTATAGCACTTCGGGGGAATAAAATGGAGGGTCCCCTGCCCCTGTCCTCGCTGAGGCTCCTGGTTCCACCTCTGCGGGTGATGACGGCTGTGATGTGGAAGGTGGTTCGTCTGAGGAACGTCATGCATTATGGGAATGTGGAGGAGTTTGTGTCCTTGGTAACTGAAGCCATCCCTGACATCTTGACGGACAGACAGATGACACTGCTCACTCTGGGCTTAAGAGCAAGGATGACATTACAGATGTTAAGTTCTGACCAGTCAGAGGATCTCAGAGGTGTTAAAACACGCTTGAACAGCCTCCTGGCATCTAGCTCAAAACAGGTGCATCCGGGTAATGAAGATCTTGAAGCCAACTTTGTCAGGCTTGTTCAAAGACTCCTGGAGGACCCAAAAGGGAGAGAGCACTTCCTCAAGAATGTGTTTCCTGTGGAGTATGGGCCTGACTTTGATACGGCTCTGGAGACACTGATTTGTGAGTTATTTACCAAACTGGAAGAGTTGCTGCTTATACCAGACTTTAAGCAGACCGCAGTGTGGATCAGTGATACGCCCTCTGTGCTAGAAGAGTACATGCAGTGTGTATCCAAAGCAGATGACCTCAAAGTACTGCTCAGAAGCAAGGCCCACTGTGGTAAAACGACCAAGATGGATACCTGTTTGCCCTCTATCTCAGAGCAGCGGCTCTTCTCATCATTATCTCTCCCTCCTTCACTGCGAGAGGCCAACACCAAAGATGtagactctcacacacaaacatttcaaaaccaaAGAGAATCTGAGGGGATTTCTCCTCAGGACGCAGAAGACATGGCGATACAGGATGTGAGATGGAAATCTGAGGAGGAAACAAACATTCTGGACAGCAGCAATGCACAACAAACAACAGGAGGGAAATGCAGCGACAGCATTCCTGATGTTGTGGAGGAGTATGATGACGGAGGTTCAGGCACCTGCTGGGTTCCCTCTACATCTACTGAGAGTCCTGTATTGTCCAGCTCTAAGATTGGCCCTCCAAAGCAGAGAGTTGCACACAAATGCTCTCAGTGTGGAAAGTGCTTCATTTACCGCTATAAACTCCTGGAGCATCAGAGGCTTCACACCGGAGAAAACCCTTTCAAGTGCTCTCAATGCGGAAAGGCTTTTAGAAGGACCTCTGACATGTCAACTCACAGGCGGTTACAGTGCGCAAAAGCAGCTTATATTTGCATCAAATGTGGGAATAGCTTCCAATCAATACAGGACAAATTAGGACACCGGTGTGGTCATAGTGTCCAGAAGTTTGACTGTTCTCAGTGCGGAAAAAGCTTTAAGAAAATGCACTTGCTGAGTAGGCATGAGCTGACTCACACCCAGAACCGTAACTTCACGTGCAGACAGTGTGGGAAAGTGTACTCCAGTATGAGAGAGCTGAAATCCCACCAGAAGATTCATCCTCCGGAGCTGTCCAATCAGTGCATGCAGTGTGGGAAGTTTTTCAGCTCTGTTGCTGGTTTGACAGCCCATGAGCTGCGCCACAGgcaacagagaacacagatctGCGTGCGTTGTGACAAAGCTTTTAAGAACAAACATGACCTAAATCTGCACATGCGCAGTCACACAGGCGAGAGGCCATTTCAGTGCACATACTGTGGGAAATGTTTCTCTGTGTCAGGAAACCTGAACGTACACATAAGGACccacactggagagaaaccGTATTTGTGCTCTGACTGCGGCAAGGGTTTTGTTTCAGCCGGCGAGCTGCAGATACATAGACGCACTCACACGGGGGAAAAACCTTACAAGTGCACTGTATGTGAGAAGGGATTCACCATGGCAAGCAAATTGACAATTCATATGCGTGTTCACACCGGAGAGCGCCCTTACATCTGTCCTGAATGTGGGAAAGGTTTTTCACGTGGTGGCGAAATGAAAAAACATACCATGAAACATACGGGGGTGCGACCCTACGCTTGTCATTTGTGTGCAAAGACTTACACATGCCACAATCACCTGAGGAGACACTTGAAAACTCACAGTGTAGTGAAAAACCAGGCTGTCTAATTCCATTGATTACCATTGTCATTTTATCAAACTGATGTAGCGATGCAACTAGCCTGTACTGATTGCGGTGTTGACAGCATGCACTTTGTAATACACTCACCCTCTCTTGTAA

Function

GO: NA

KEGG:

id description
ko03040 Spliceosome

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815020.1 False 2209 mRNA 0.48 7 13033439 13037812
XM_039815021.1 True 2278 mRNA 0.47 7 13034049 13037812

Neighbor

gene id symbol gene type direction distance location
LOC120567919 LOC104962026,LOC103362208,LOC102293788,LOC102208917,LOC101474809 coding upstream 7508 12979093 ~ 13025931 (+)
gorasp1a gorasp1,LOC103360281,LOC104945829 coding upstream 66877 12961268 ~ 12966562 (+)
oxsr1a LOC104927954,LOC103360287,LOC100697833,LOC102210831,LOC102290626 coding upstream 132014 12888543 ~ 12901425 (+)
ctdsplb LOC103360289,LOC102790982 coding upstream 164297 12855102 ~ 12869142 (+)
LOC120567759 vipr1,LOC106517907,LOC107384262 coding upstream 196457 12813318 ~ 12836982 (+)
LOC120567921 LOC103362241,LOC104934209,LOC101483427 coding downstream 1078 13038890 ~ 13045691 (+)
col6a2 col6a2 coding downstream 43931 13081743 ~ 13096416 (+)
zgc:162816 LOC103362211,LOC102298354,LOC107097021 coding downstream 63590 13101402 ~ 13105801 (+)
orc2 LOC102787487 coding downstream 68887 13106699 ~ 13112264 (+)
pecr pecr coding downstream 80757 13118569 ~ 13122673 (+)
G114000 NA non-coding upstream 5269 13027079 ~ 13028170 (+)
G113956 NA non-coding upstream 159129 12861625 ~ 12874310 (+)
G113938 NA non-coding upstream 254041 12778340 ~ 12779398 (+)
G113852 NA non-coding upstream 405920 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 430517 12601183 ~ 12602922 (+)
G114008 LOC104953400 non-coding downstream 114287 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 158449 13196261 ~ 13198734 (+)
G114035 NA non-coding downstream 161956 13199768 ~ 13200746 (+)
G114037 NA non-coding downstream 167013 13204825 ~ 13207023 (+)
LOC120568783 NA non-coding downstream 212939 13250751 ~ 13254585 (+)
G113979 LOC104959684 other upstream 57802 12929215 ~ 12975637 (+)
LOC120569010 NA other upstream 73090 12952548 ~ 12960349 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other upstream 114241 12911439 ~ 12919198 (+)
LOC120568152 LOC104963178 other upstream 126196 12901539 ~ 12907243 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 433599 12582642 ~ 12599840 (+)
rpl37a rpl37a,RPL37A other downstream 76784 13114596 ~ 13117356 (+)
ndufb3 ndufb3 other downstream 85218 13123030 ~ 13125463 (+)
si:ch73-71c20.5 NA other downstream 145472 13183284 ~ 13186364 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 1249338 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1947965 14985777 ~ 14993083 (+)

Expression


Co-expression Network