pigk (pigk)


Basic Information

Item Value
gene id pigk
gene name pigk
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 15923702 ~ 15954239 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815030.1
ccTACCGGAAGCACTTGCTGGGCGGAGCCGCCGGTTTTCACTTCCTTGATGCATAGTGTtgccttttatatatgtcaatgagtgTTGCACAATGAAAATACTCACTTTTTTCAGCTTATTTTCCTCATTCTTATCAGCGAAAAGCATTAACGTTGAGGAGAACGCAGGGCAGTTCTTCAGCAGTGGTCATACTAACAACTGGGCTGTTCTGGTGTGTACATCGAGATTCTGGTTCAACTACCGTCATGTGGCCAATACTCTGTCCGTCTACAGAAGTGTTAAGAGGCTGGGCATTCCTGACAGccACATAGTTCTCATGCTGGCTGATGACATGGCTTGTAACCACAGAAACCCCAAACCTGCCACAGTGTTCAGCCACAAGAACATGGAGCTGAATGTGTACGGTGATGACGTGGAGGTGGACTACCGAGGATATGAAGTGACGGTGGAGAACTTCCTGCGTGTTTTGACTGGCAGACTGCCACCCAGCACTCCACGCTCAAAACGCCTCCTCTCTGATGACCGAAGCAACATTCTCATATATCTAACAGGCCATGGCGGAAATGGCTTTCTGAAGTTCCAGGACTCTGAGGAGATAAGTAATGTGGAACTGGCCGATGCTTTTGAGCAGATGTGGCAGAAAAGAAGGTACAATGAGCTGCTCTTCATCATTGACACCTGTCAGGGCGCTTCCATGTATGAGAGGTTCTACTCTCCAAACCTCATGGCTTTGGCCAGCAGTCAAGTTGGAGAGGACTCCCTGTCGCACCAGCCAGATTTGGCTATAGGAGTCCATTTGATGGACCGTTACACCTTCTACCTGCTGGAGTTCCTGGAAGACATCCACCCTGCAAGCAAAGCCAACATGAATGACCTGTTCAAAGTATGTCCCAAGAGTCAGTGTGTGTCCACACCAGGCCACCGTACTGACCTTTTCCTGAGGGACCCAGGAAGTGCCCTCATCACAGATTTCTTTGGTAGTGTGCGCAAAGTCGAGATCACCATGGAAACCATCAACTTGACCGACCCCATCAAGGAGGCTGAGCAGAATCCCATGAATGAAAAGCCGCAAAAAGTGACATACTCGTATGTGGACCAGCTGCCAGTGTCTGAGATTATCCATCAGAAACCAAAGCAGAAAGACTGGCATCCTCCTGATGGCTTCATCCTGGGCCTGTGGACTCTAATCCTCCTGGTGTTTTTCAAGACGTATGGCATCAAGCACCTCAAACACATCTTCTGAGGCCTCAGCGTTTATGCTGCTGGATATTTGAGGACATGAAGCTGCAGATCAGGAGCGTTTACTGAAGGGATATTACAGGAAAGGTGCGGTTGGTGACAGGCTTATTTTCGCGCCTTCTTGGCCAGGAACTGTGTGATGCAATTGGtgccttttttttgggggggggggggggaatgattGCTCTCTACTaatgaaattattttagatGTAACAAGGGAGAAGGGACATATACTTGAAAGTCATGCATCAGATATGCAAAGCCTTGTCTCTGCATGGGCATACCACTGGCAGTATGGccatttttaactgttttatgttttctttttgacaaggactcttttatttatttcttttgtgtCAAAAGTTCTGTTTTGTCAAGCCATTCCATAATTGTGATTTAATGATTTGGTTAAAATGCACGTAATTGAGTCCGCAGATaagaattacatttatttttgagaGCGTGCTACTCTGCATATTTCAGCAGCAGCCTTTCTGTTTAAGTGCTACTCAGAACGTCTGCTCGGTCAGAAAAAGGAGCGGGGTGATTGGCTGTGAGTGGGCTGTGAAGAGATTACTATTTAATGTCTCCCTTGTCCATATACATTACACCCCTTGACTGTCATATCACGCTTGTGAAGGATAACAATCGCACCTAATCCCATCTTGCATGATGGACCCATCCACTTTCCCATTCACCAAATTGCCCTCCCCGTGGAAACATCCATTAGCTCCCCAGCCGTGTACTCCACTGATTGTATTCTGGGTGATGGACAGCTATTTCCCCGGCCATTCCACGTCTTGCGCTAAAGCAGCGATAAGTGACTGATAACCTAGTAAGCCGCCGGCCGTCCCAAATGAATCTCCTCTGTGCTGGGACGTGTTTTccccctctccttttctctgcaTGTGTAACCACTCTGCATTGGGCTtattgttggggggggggagtgacTGATGCTATAAGCATATGGATTGAACCTGAGGTAGTTTATCTTTGCTCCTTGGCACGAGGACCCGCCCATCGGGTGCCCACTGCCATTCTCCCTCGCGGCTGAAGTGGAAAATAGATGGAGTTGGAAATGAAACCATATGTATCGGAAGGCAGCTGCTGCGTCAGCCACCAAGTACCTTTTCTTATACATTATTTATGCAACGCGTATTTCTTCATCCTTTTTCCTCCctgtttcttattttctgtaatCTCATTCCTCCTGGTCCCCTTTCAAAGAGAGCAAGCTCATTTTGTTTCCTTAATTAGAAAGATTTTGATTAAAGATGAAACACAAATGAA
>XM_039815031.1
ccTACCGGAAGCACTTGCTGGGCGGAGCCGCCGGTTTTCACTTCCTTGATGCATAGTGTtgccttttatatatgtcaatgagtgTTGCACAATGAAAATACTCACTTTTTTCAGCTTATTTTCCTCATTCTTATCAGCGAAAAGCATTAACGTTGAGGAGAACGCAGGGCAGTTCTTCAGCAGTGGTCATACTAACAACTGGGCTGTTCTGGTGTGTACATCGAGATTCTGGTTCAACTACCGTCATGTGGCCAATACTCTGTCCGTCTACAGAAGTGTTAAGAGGCTGGGCATTCCTGACAGccACATAGTTCTCATGCTGGCTGATGACATGGCTTGTAACCACAGAAACCCCAAACCTGCCACAGTGTTCAGCCACAAGAACATGGAGCTGAATGTGTACGGTGATGACGTGGAGGTGGACTACCGAGGATATGAAGTGACGGTGGAGAACTTCCTGCGTGTTTTGACTGGCAGACTGCCACCCAGCACTCCACGCTCAAAACGCCTCCTCTCTGATGACCGAAGCAACATTCTCATATATCTAACAGGCCATGGCGGAAATGGCTTTCTGAAGTTCCAGGACTCTGAGGAGATAAGTAATGTGGAACTGGCCGATGCTTTTGAGCAGATGTGGCAGAAAAGAAGGTACAATGAGCTGCTCTTCATCATTGACACCTGTCAGGGCGCTTCCATGTATGAGAGGTTCTACTCTCCAAACCTCATGGCTTTGGCCAGCAGTCAAGTTGGAGAGGACTCCCTGTCGCACCAGCCAGATTTGGCTATAGGAGTCCATTTGATGGACCGTTACACCTTCTACCTGCTGGAGTTCCTGGAAGACATCCACCCTGCAAGCAAAGCCAACATGAATGACCTGAGATACATCGGCCGCAGGGACCACTCTTCATCCCCATCACCACCTACCCCCAACCTCAGTTACAATCAAAACACCTCAAATCCTTACTCGCACAATCAATGTGCTCTGACTAATCCTTATTATTCTTTCCAATGTTCCTCTTTCTCAAGATGCACTCTTTGTTCTTGAGCTTTTGTGGAATTAAGGATCGATGCTATGGATTTCCCAGAGAAGCCCACCaagttctttatttatttcttttttttttccagtctgCAAAGGCTTGCCCTTTTAATGAAACAGAAATTGCCTCCACCTTCCAGCAAAATACTCCACCATTCGTGTGTTTTTCAAGTCCTGTTTGGCTGATAGAGATAACATTCACCTTGGTttaatgattttctttttcttttcaaatggaGAGCCCTGTCCGACAACACACTGATGAATCGCACACTTAAGAGGATTAACCCAACCAGTGGTTACACACCAGGCACTAAAAGAATTATAATTGATGATGAAATGCACAAATGTCATGCTCCTTGGTCTTCTCCACACACTTTTGTGTATTTTAACATCTCCCTCTGCAGCTCTAGCCATGTTTAATGCAGCTGGCTCCTATCTATGATATGAGAAGTAGGAGACACAAACCCTTTAACACTGTCTGCTTATTAAAATCCCCACTCCCCTGGCAAAGGTGACTTGCACCATGTAATTATTGCTATACCTCCTGACGACACCATGAGTaggtatttacagtatttatatacttaaaatgttttatttaggtTTCTTGAGTGGGTGGCTGTAATGGGAATAAAGTCCCCAACTTTGGTTGTTAGTGTGCTTTCTGTTGCACTGAGTTACATATTTCGAACACACTGCATGT

Function

symbol description
pigk Predicted to enable GPI-anchor transamidase activity. Acts upstream of or within detection of mechanical stimulus involved in sensory perception of touch and protein localization to cell surface. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be part of GPI-anchor transamidase complex. Orthologous to human PIGK (phosphatidylinositol glycan anchor biosynthesis class K).

NR:

description
GPI-anchor transamidase

GO:

id name namespace
GO:0050976 detection of mechanical stimulus involved in sensory perception of touch biological_process
GO:0016255 attachment of GPI anchor to protein biological_process
GO:0006508 proteolysis biological_process
GO:0034394 protein localization to cell surface biological_process
GO:0042765 GPI-anchor transamidase complex cellular_component
GO:0004197 cysteine-type endopeptidase activity molecular_function
GO:0003923 GPI-anchor transamidase activity molecular_function

KEGG:

id description
K05290 PIGK; GPI-anchor transamidase subunit K

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815030.1 True 2537 mRNA 0.47 11 15923702 15954239
XM_039815031.1 False 1745 mRNA 0.45 9 15945710 15954239

Neighbor

gene id symbol gene type direction distance location
cldn1 cldn1 coding downstream 303043 15616397 ~ 15620659 (-)
bcl6ab NA coding downstream 335818 15580776 ~ 15587884 (-)
fam78ba LOC108248539,LOC106530399,LOC103357776,LOC101481240,LOC104920913,LOC105925252,LOC103479089 coding downstream 350562 15568830 ~ 15573140 (-)
imp3 imp3 coding downstream 369733 15549860 ~ 15553969 (-)
zgc:55943 clg18h1orf21,LOC104920916,LOC103358173,LOC102298056 coding downstream 376345 15537896 ~ 15547357 (-)
zzz3 zzz3 coding upstream 79043 16033282 ~ 16054068 (-)
usp33 usp33 coding upstream 100020 16054259 ~ 16077214 (-)
fubp1 fubp1 coding upstream 139769 16094008 ~ 16103715 (-)
slc25a24l LOC105932242,LOC107095427,LOC104957513,LOC102785394,LOC101478509 coding upstream 150533 16104772 ~ 16111436 (-)
txndc12 txndc12 coding upstream 183625 16137864 ~ 16143686 (-)
G115061 NA non-coding downstream 1246 15922204 ~ 15922456 (-)
G115060 st6galnac5,LOC102788813 non-coding downstream 2171 15918321 ~ 15921531 (-)
G115056 NA non-coding downstream 77093 15843159 ~ 15846609 (-)
G115054 NA non-coding downstream 80609 15842750 ~ 15843093 (-)
G115048 NA non-coding downstream 178474 15741824 ~ 15745228 (-)
G115075 NA non-coding upstream 77693 16031932 ~ 16032227 (-)
G115175 zfyve9 non-coding upstream 217234 16171473 ~ 16171811 (-)
G115178 NA non-coding upstream 220022 16174261 ~ 16174553 (-)
G115179 NA non-coding upstream 221119 16175358 ~ 16175706 (-)
G115180 NA non-coding upstream 221726 16175965 ~ 16177210 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other downstream 619092 15290082 ~ 15304610 (-)
G114680 NA other downstream 1126658 14795918 ~ 14797044 (-)
LOC120568687 NA other downstream 1305478 14613613 ~ 14618224 (-)
tfr1a NA other downstream 1954891 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 2441477 13469531 ~ 13482225 (-)
G115164 btf3l4 other upstream 189921 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 228415 16182654 ~ 16201698 (-)
mppe1 mppe1,LOC102781954 other upstream 363179 16317418 ~ 16327426 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other upstream 376713 16330952 ~ 16335956 (-)
G115312 ralbp1,LOC102778314 other upstream 682869 16637108 ~ 16639812 (-)

Expression


Co-expression Network