LOC120567933 (LOC106676760)


Basic Information

Item Value
gene id LOC120567933
gene name LOC106676760
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1035370 ~ 1039308 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815034.1
TTGTCTGCTTGTTTTAGTTTTCTCCTACGTAAAAATTCTCAGTTTGGAAATGAGTTAGGCAACCTGTAGCGAGTCTCAGCCACAGATCACATGACAATACCAGCtgagcttcaggtttataaCATTTATCATCACTTTTAGTTTGCATGCTGAGATTAATTATCTGAGATTTTACTTCAACAGTTGTGTTAATGCACTACACACTCAAGACCAAAACAGAAGGAGTTTACAGTATCTGATGAGGACACAAGAAATGATTGACCAGGGTAGAATAAAACTCAACCTGATAAACTAGAATAACAAAGCTCTGCCCTCCACCTGACTCACCTGAGACATACAAAGAAACAGGTTGTTATTCTGCCTcactgagacaacacacacacactctgagagACGGAGGATAAGATTCCCATTCAGACCAGCACGTCCTTTGAGAGAGGACATCTACAGGAGGGAATATTGGGAATACTGGGACACTACCACTTCATCCAGCTGCTGAATCCACAAACTGAACGAGTGATTTACAACAACAAAGACTCAAAGTGAACGTAAGTTTGAGGGAACAGGGAGTGTCTGAGCTGTCTGCCTGCTGTGATTTCTGCTTCACTCAGAGACTAAATGGCTTCCAGGTTAGAGGAAGATCTCTGCTGTCCTGTCTGCCATGAAGTCTTTAAAGATCCTGTCATCCTGTCatgtagccacagcttctgtaGAGACTGTCTGCAGAGCTGGTGGACAGAGAAACTAATACATGAGTGTCCAGTTTGTAAGGAAAGATCTTTGTTTGAACCCCCTTTAAAGCGGAGGTTAAAGAACCTGTGTGAGAGTTTCCTACaggagagagatcagagagcttcagaggctctctgcagtctgcactctgagaaactcaaactcttctgtctggaccatcagcagccagtgtgtCTCGTCTGCAGAGATTCAGAAAAACACTCCAACCACATAATCAGACCCATCGATGAAGCTGCACGACAACACAAGAAGGAACTTCAGGAAACTCTGGAGCCCTTAAAGGAGAAGTTAAAGGTTTTTGAACAAGTTAAAGAGAAGTTTGATCAAACAGCAGAAGACCTGAAGGTTCAGGCCCGACGCACAGAGACGCAGATTAAGGATCAGTTTAAGAAGCTTCACCAGTttctagaagaggaagaggaggccaggatggctgcactgagggaggaagaggagcagaagagtcagaggatgaaggagaagatggaggctctgagcagagagatagcagctctttcagacacagtcagagccacagaggagcagctgagagctgaagacttctcattcctgatcaactacaaggctgcagtggaaagagtccagcagagccccctgctggaggatccacagctgctctcaggagctctgatagacgaggccaaacacctgggcaacctgagcttcaacatctggaacaagatgaaggacctggtctcctacactcctctggttctggacccaaacactgctcATCCAAAACTCATCCTGTCTGAAGATCTGACCAGTGTGAGAACAGGAGAGAAACAGCAGCTTCCTGATAATCCAGAGAGGATTGATGGTTACCCCTCTgtcctgggctctgagggctttaactcagggactcacagctgggatgTCAAGGTTGGAGACAGTACAGGCTGGGCTCTGGGTGTGTTAGGAGAGTCTGTCCAGAGGAAGGGACTCATACGGTCTGGATTATGGACAATGTATTTCTCTGGAGGTGGATACCTAGCATCCTCTCCATCAGGTCCAACCACTGTTCTCCTGTTGAAGAAGAAGCTCCAGAGGATCAGAGTGACTCTGAACTGGAACAGAGGAAATCTGTCCTTCTCTGATCctgatactaacacacacatacacaccttcacacacactttcactgagaagATGTTTCCATTTTTTAACACTGTGGGTGAACTGAAGGTTTCCCCAGTGAAGGTCTGTGTGAGACTGTACAACAAGAAGTCCACGTTTCAGATTTTGGTGGTGGGAGGGGCTTCCCTTTGATTAtcaaatatatctttaatagGGCTCGGTACTGAACTTACATACTTTCGGGCACTGATTGAATTGCCTCCATAGTAATGAGTATTTAAAAATGCCTCGTAATTCAATAACAAATGTCAGTACTTAAATTAaaaggttggtttggtcagtaATCAAACTGCTACAAGCCTTCTAGGCTACTTCTACTTGGAGAGAAGCTAAATGTTTCAACTGTTTATACATTAATGTTAATTTAAGGCATCACTTTGACCTATTTCAACCGTTAGCTAAATATTTCAACTGTTAGATACTTTAAAAAATTTCTCCAATAATTTAGCTAAATATGCGAACTGTttagtcattacttttagctaaacTTCTGTGCTTGCCTGCTAACCAGTTTCCACACGCTCTAACATAACTGAACATGTAGTGTTCAGTTATGTTACAGGTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTGCAACATGTAGAGTTCAGGTGTTACAGGTGATGATGTAACTGCAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAATATGTAGAGTTCAGGTGTTACAGGTGATGATGTAACTACAATATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATGTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTGCAACATgtagtgttcaggtgttacaggTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATCTAACTACAACATGTAGAGTTCAGGTGTTACAGGTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTACAACATgtagtgttcaggtgttacaggTGATGATGTAACTGCAACATgtagtgttcaggtgttacaggTGATGATGTAACTGCAACATgtagtgttcaggtgttacaggTGATGATGTAACTGCAACATgtagtgttcaggtgttacaggTGATGATGTAACTGCAACATGTAGAGTTCAGGTGTTACAGGTGATGATGTAATGGCCGGCAGGACACCGTTGTGTTGACTGTTCTGAACTGAAGCAGTGCATCATGGGAACATGTTCTGAACTGAAGCAGTGCATCATGGAAACATGTTCTGAACTGAAGCagtgcaaagcatcatgggaacaTGTTCTGAACTGAAGCagtgcaaagcatcatgggaataTGTTCTGAACTGAAGCagtgcaaagcatcatgggaacaTGTTCTGAACTGAAGCA

Function

NR:

description
nuclear factor 7, brain

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815034.1 True 3939 mRNA 0.43 1 1035370 1039308

Neighbor

gene id symbol gene type direction distance location
LOC120567938 NA coding upstream 8546 1023627 ~ 1026824 (+)
LOC120567936 NA coding upstream 37155 993359 ~ 998215 (+)
LOC120567931 NA coding upstream 100190 917128 ~ 935180 (+)
c11h7orf25 LOC104932663 coding upstream 271239 757121 ~ 764131 (+)
LOC120569073 NA coding upstream 304146 693088 ~ 731224 (+)
LOC120568483 NA coding downstream 1518 1040826 ~ 1063399 (+)
wdr33 wdr33 coding downstream 112812 1152120 ~ 1200581 (+)
si:ch1073-184j22.2 LOC101068556,LOC108228226,LOC105923021 coding downstream 168860 1208168 ~ 1214476 (+)
pex5lb LOC102798103,LOC101487249 coding downstream 186742 1226050 ~ 1287799 (+)
LOC120567879 NA coding downstream 404855 1444163 ~ 1444665 (+)
G111034 NA non-coding upstream 2994 1031000 ~ 1032376 (+)
G111030 NA non-coding upstream 10868 1024074 ~ 1024502 (+)
G111016 NA non-coding upstream 13621 1020404 ~ 1021749 (+)
G111025 NA non-coding upstream 28020 1004681 ~ 1007350 (+)
G111026 NA non-coding upstream 29590 1005324 ~ 1005780 (+)
G111040 NA non-coding downstream 4210 1043518 ~ 1044162 (+)
G111041 NA non-coding downstream 10611 1049919 ~ 1050362 (+)
G111012 NA non-coding downstream 21006 1060314 ~ 1060747 (+)
G111052 NA non-coding downstream 101732 1141040 ~ 1201498 (+)
LOC120568206 NA non-coding downstream 137990 1177298 ~ 1178632 (+)
si:dkey-154p10.3 NA other upstream 32816 982515 ~ 1002554 (+)
dnajc1 dnajc1,LOC106533614 other upstream 278872 737805 ~ 756498 (+)
G110789 NA other upstream 419374 612113 ~ 615996 (+)
G110768 NA other upstream 510219 523450 ~ 525151 (+)
G110704 NA other upstream 773443 182864 ~ 261927 (+)
G111076 NA other downstream 203341 1242649 ~ 1336191 (+)
si:ch1073-184j22.1 LOC103374727,LOC102078966,LOC107100356,LOC101466520,LOC102199261 other downstream 282906 1322214 ~ 1342351 (+)
G111106 NA other downstream 401345 1440653 ~ 1441147 (+)
LOC120568494 NA other downstream 412566 1451874 ~ 1683286 (+)
G111112 NA other downstream 465301 1504609 ~ 1505015 (+)

Expression


Co-expression Network