LOC120567958 (LOC106675582)


Basic Information

Item Value
gene id LOC120567958
gene name LOC106675582
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6175573 ~ 6178577 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815074.1
AaacaagatggatttttttattattattattaaagtgcAAGCTCTGTTGAAAAGTAGTAACAATAATACTTTCTCTGACACTAAGATGTAAAATGGCAcagaaaggagttcagctggaccgggaaaccttctcttgttcaatctgtctggatctactgaaggatcctGTGACTACTTcctgtggacacagctactgcatgaactgtattaaagCTCACTGGGATGGAGAGGATGAGAAGAAAATCTACAGCTGTCCTCAGTGTAGAAAGACTttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactgaagaactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCACACAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGCGAGAAACACCTTCAGCCTCATTATAACTCCTCTGCGTTtgagaaacacaagctggtggagcccTCCAAGAAGCTGAAGGAGAACATCTGCTCTTgtcatgatgaggtgatgaagatgttctgccgtactgatcagcagcttatctgttatctctgctctgtggatgaacataaaggccacaacacagtctcagctgcagcagaaaggactgagaggcagaaagagCTCGAGGGGAGTCAacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacaggAGGTGGAGGCCATCAATCGCTCTGCTAATAAAGCAGTGAAAGAAAGTAAGAAGATCTTCACTGAGCTGATCCGTCTCATGGAGAAAAGACGCTTTGATGtggagcagcaggtcagatcacAGCAGAAAACTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgCTGAGATGAAGAAGATCTCAGACACAGAGGATCACAtccagtttctacacaactactcctcactgtcaccactcagtGAATCTACATCCAGCATCGATATCCGTCCTCTGCGCTACATTGAGGACGTGACAGCGGCtgtgtcagaagtcagagacaaaCTACAGGACGTCCTGAGAGACACATGGACAAACATCTCACTGACTGGGACTGAAGTGGATGTTTTACTGTCAAATCCACAATCAGATCCAAAGACTAGAGCTGACatcttaaaatattcacttgaaatcacactggatccaaacacagtaCATCCAGAGCTGTTGttatctgaggggaacagaAAAGTAACCGTTATGGAAGAACAACAGTCTTATTCTCatcacccagacagattcacaGATTATTGGCAGGTCCTGAGTAAAGAGAGTCTGACcggacgttgttactgggaggtggagtggagagggagaggtgaagtagcagtcgcatacaagaatatcagcagagcagggtGGTCGGATAAATGTGAATTTGGACTCAATGACAAATCTTGGGCGTTAGGATGTAACAAAAACAGTTATACATTTTGGTACAACAATGTCCAAACTCTTGTCCCAGGTCCTgtgtcctccagagtaggagtgtacctggatcacagtgcagGTGGTTTACCAGGAAAACTTATGGAACTTATGGCCAAACATGGTTTTCCATTGTCGCCAGTGCTCGAATTGGACCAAAAAAGGTGCCAGTGACCTGTTACAGCAATCTTGTAGGGGTTTCGCCAGTCTCACAGTCGAATCTTCGCGTCTGAAAATGTGGTTATGAAACAAAGGATCATTCCATTTGTGGGGGTGCTGAATGTCTGACTTTACATAAAATTGTTTGGTTTGTCCCGAAAAAAAATCAGGTTTTATAGCCTATTTTGATATAAATATCAGCCTATTAATAAtactgttaataacaattactcATGTGGACAAACACAAGAAGTGACGGTACTTAGTACTGGCCCTTTTcatacctttatttattcaggggagtttcactgagaggaagcctctcttttgcaggaaagCCCCGATCACATTTACACAGTTGCACACATTCaaacctggaagctgcccagtacaaccacagtctgatctgctggccactgagcagcttaACTGGAGTGATTGGGATCAAGAGCCTCAGTCAAGGGCaactcagtggtggtaatgagggatgGACGGGTGTTGGGACGGGTGTCTGTTTGGGGGATTAAACCGGCGACCTCCCGGTCCCTGCTCCAACTGTATATGCCACCACTGCCCCAGGCACTGATTGCAAATGTAAATggcctgtttttatatagcgcgtttctagtcttaatgactactcaaaacgctttaacatagtacaggaaccattcacac
>XM_039815075.1
AaacaagatggatttttttattattattattaaagtgcAAGCTCTGTTGAAAAGTAGTAACAATAATACTTTCTCTGACACTAAGATGTAAAATGGCAcagaaaggagttcagctggaccgggaaaccttctcttgttcaatctgtctggatctactgaaggatcctGTGACTACTTcctgtggacacagctactgcatgaactgtattaaagCTCACTGGGATGGAGAGGATGAGAAGAAAATCTACAGCTGTCCTCAGTGTAGAAAGACTttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactgaagaactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCACACAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGCGAGAAACACCTTCAGCCTCATTATAACTCCTCTGCGTTtgagaaacacaagctggtggagcccTCCAAGAAGCTGAAGGAGAACATCTGCTCTTgtcatgatgaggtgatgaagatgttctgccgtactgatcagcagcttatctgttatctctgctctgtggatgaacataaaggccacaacacagtctcagctgcagcagaaaggactgagaggcagaaagagCTCGAGGGGAGTCAacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacaggAGGTGGAGGCCATCAATCGCTCTGCTAATAAAGCAGTGAAAGAAAGTAAGAAGATCTTCACTGAGCTGATCCGTCTCATGGAGAAAAGACGCTTTGATGtggagcagcaggtcagatcacAGCAGAAAACTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgCTGAGATGAAGAAGATCTCAGACACAGAGGATCACAtccagtttctacacaactactcctcactgtcaccactcagtGAATCTACATCCAGCATCGATATCCGTCCTCTGCGCTACATTGAGGACGTGACAGCGGCtgtgtcagaagtcagagacaaaCTACAGGACGTCCTGAGAGACACATGGACAAACATCTCACTGACTGGGACTGAAGTGGATGTTTTACTGTCAAATCCACAATCAGATCCAAAGACTAGAGCTGACatcttaaaatattcacttgaaatcacactggatccaaacacagtaCATCCAGAGCTGTTGttatctgaggggaacagaAAAGTAACCGTTATGGAAGAACAACAGTCTTATTCTCatcacccagacagattcacaGATTATTGGCAGGTCCTGAGTAAAGAGAGTCTGACcggacgttgttactgggaggtggagtggagagggagagagtccagaccacattcactcagcctctctacGCTGGAGTTCGGCtttattatgattatggaaacaCAGCTGAGTTCTGTAAACAGAAATAGACAGAAATCATTCAGGGTTGTACACTTTGTTTTTACTCTTATACTTATTTTATTCGAATAAAATATTCTGAcaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815074.1 True 2384 mRNA 0.45 2 6175573 6178577
XM_039815075.1 False 1605 mRNA 0.45 2 6176732 6178577

Neighbor

gene id symbol gene type direction distance location
LOC120567957 NA coding downstream 6460 6165148 ~ 6169113 (-)
LOC120568672 NA coding downstream 96736 6077151 ~ 6078837 (-)
LOC120568053 NA coding downstream 112581 6060725 ~ 6062992 (-)
LOC120568550 LOC107380363,LOC107396089,LOC107391794,LOC107390451 coding downstream 129321 6045322 ~ 6046252 (-)
nol7 NA coding downstream 193035 5977281 ~ 5982538 (-)
trnas-uga_1 NA coding upstream 22085 6200662 ~ 6200743 (-)
trnas-cga NA coding upstream 26815 6205392 ~ 6205473 (-)
trnas-cga_1 NA coding upstream 27749 6206326 ~ 6206407 (-)
trnas-cga_2 NA coding upstream 29913 6208490 ~ 6208571 (-)
trnas-cga_3 NA coding upstream 31255 6209832 ~ 6209913 (-)
G112381 NA non-coding downstream 59429 6113462 ~ 6116144 (-)
G112383 NA non-coding downstream 69756 6082641 ~ 6105817 (-)
G112352 NA non-coding downstream 181800 5922747 ~ 5993773 (-)
G112332 NA non-coding downstream 383810 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 453603 5720657 ~ 5721970 (-)
G112453 NA non-coding upstream 168758 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 178221 6356798 ~ 6357990 (-)
G112461 NA non-coding upstream 179502 6358079 ~ 6359329 (-)
G112462 NA non-coding upstream 180895 6359472 ~ 6359952 (-)
LOC120568643 NA non-coding upstream 209517 6388094 ~ 6392982 (-)
G112328 NA other downstream 323126 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 429492 5723733 ~ 5746081 (-)
G112233 NA other downstream 506886 5664004 ~ 5668687 (-)
G112046 NA other downstream 1891490 4267538 ~ 4284083 (-)
G112043 NA other downstream 1936903 4238102 ~ 4238670 (-)
zmynd11 zmynd11 other upstream 517033 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 777863 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 898032 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2308890 8487467 ~ 8487539 (-)
G113070 NA other upstream 2601875 8780452 ~ 8790042 (-)

Expression


Co-expression Network