znf622 (znf622)


Basic Information

Item Value
gene id znf622
gene name znf622
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5705604 ~ 5718217 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815113.1
CGAAGACGAAGAAGTTCACCAGGAAGTGACCCTCGTGTTGTGGTGTAAGCTAAAGGGAGACAGGAGCACACTTACACACAGAAAAGAGATTAAAAGTACTATTTTTTCCAACGGAGACAGTTTACTGAATAAGTTGCCATGGCCTCCTACACCTGCATCAGCTGCAGAGTGGCTTTCACAGATGGCGAGGTGCAGCGAGCGCACTACAAAACCGACTGGCACCGCTACAACCTGAAGCGCAAGGTCGCCGACATGCCACCGGTCACCGCCGAGAACTTCCAGGAGCGCGTCCTGGCCCAGCGGACGGCCGCCGAACAGCAGCTGAGCGACGCGGCAGCCACCGAGGGCTGCGCCGTCTGCAACAAGAAGTTCTCCAGCGCCAACGCCTACCAGAACCACCTGCAGTCACACAAGCACCAGCAGGCCGAGAAGCAGGCCCTGCTGGCCGCCCAGAGGAAAGTAGAGATGATGAACGAGAAGAATCTGGAGAAAGGGCTCGGGGACGAGAAGGTGGATCACGATGCCAAGAACGAGGCCCTGCAGCAGGCCCTGAAGGAGCAGCAGAGGCCCAGCCCGGCCAAGCAAGGCTCATCAGAAGGAGTGACGAGGAAGAGGGCGGAGAAGCTGGAGAAACCTCCCAGGCTGATGTGGCTGGAGGAGCAAGCCAAGAGGCGAGAGGGAGAAGATGGAGCCACAGCTGTGGAAGAAGAGTGGGAGGACGttcaggaagaggaggaagatgacgatgagatggaggaggaggaggaggaggatgaagaggagacgATGGATCAAGAGGAGGGAGACTCGGCCGCTGCGTCTGACCCCCGACCCCCTGCTCTGCCGGGCTCCATCCCCGTCACCGACTGCCTGTTCTGCTCCCACCACTCCAAGTCGCTCATGAAGAACATCGGCCACATGACCAAAGTCCACAGCTTCTTCATCCCCGACGTGGAGTTCCTCGTCGACATTAAGGGCCTCGTCCGATACCTCGgAGAGAAAGTCGGTGCTGGAAACGTGTGTTTATGGTGTAACGAGAAAGGCCGCTCGTTCTACTCGACAGAAGCGGTACAGAGTCACATGACAGACAAAAGCCATTGTAAACTCTTCACAGACGGCGACGCTGCCCTGGAGTTTGCAGACTTCTACGACTTCAGGAGCAGCTACCCAGACAGGAAGGAGGGAGAAGATGCTGAAATGGCCGAAGAGGAGCTGCCTGATGACAAAAACCTGGAGTACGACGACGAAACGCTGGAGCTGACTCTACCTTCAGGTGCTACGATCGGCCACCGCTCCCTCATGAGGTACTACAAACAGCGGTTCGGCGCTCAGAGAGCGGTCGTGCTCACCCACAATAAGAACGCTGTGGGCCGAGTCCTGCGGCAGTACAAAGCTCTGGGCTGGGGCGGAGACGCAGgcTCCCTCTACCAGAAACAGAAAGACATGCAGTACGTACAGATGATGAAGTCAAAATGGATGCTGAAGCTCGGCATGAGCAACAACGCCACCAAGCAGAAGCACTTCAGAGCCCAAGTGATGTTCTAAACTGGGACCGGAGGGAACTGAACGTCAACGAAATGTGACGTGGACTTTCAAATTTAAGCTCTTTTGCTACAAGACTTTCAGTACAGCTGCGAGAATGGCGGTTCCTTGGCACAGCGGCGGAAAGAAAAATCAAACGTGACGATCACGTCACGTCAGCAGTGCTATTGTGTTTGAAGGAAACGCAGCCGTGTTGATGTGAGGTTTAAAAACGATAGCAAAAACCTTGATGTGGAGAAACCTTTACCTACTTCTTGGAATTCTCACATGAACTTCCAACTCTGTTGTCTCTGTAAAGCTGTGTGGAAAGTGTACGTCGTCTGTAAATCTGCTTGAGAATGACGCGGAGGCTCAAGGAGAGGAGATCAAGAGCATGAATCACATTTATAAAATTATTTTGAAACCGTTAAAATCAAGTCAAAGCTAAAGTAGATCAGTATTAAGGAGGTGATTTAACTATTTGCGTTttgtagggctgtcctcgattTTAAAGAAGTTCTTATTCGACTTTAAaaatgagtttctccacaaagaatcaaGCAAGAGCACAACATTTCTTGGAAATAACGCATTCAGCATGAACACAGCATAAAACATTACTAattgactaaagaaatcttagcaGACTAAGACCACAATggctaggattgggcatcgagaaccggttccaacttggaatcgttccaaaaattacgattccaatggaatcgcttctttattggaatcatttggaaaattagtttttttctatTGGCGAGGTCGCTTATTGTGTTGCAGCCGcagagcacagtaagcggtgctctaaagtgtggctgaaaaagctgtaaatcaccattgaatAAAAATGTCCTTAAGCCTGTGatcccgtttcaactccaccactcaaagaatcggaatagAGAAtcaataagaaccggaatcagaaggaagaatcagaattggaatcagaattggaaCTAGAATTGTTAAGATTAAAATGATGCCCAACCCCAAAAACAGCTGATTTGTCGACTAAGAGGGGGCAGCCCTACTATTTTGGACTCCGTCAGTTACgttacacattttattttcaaacttaACGACCAGATTAAAAATGTAAGATTCAATGTCCAACCAACATCCAACCAAATAAATGTGTTTCATATTTATTGGAAA

Function

symbol description
znf622 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to be located in cytoplasm. Predicted to be part of preribosome, large subunit precursor. Is expressed in optic cup and optic tectum. Orthologous to human ZNF622 (zinc finger protein 622).

NR:

description
PREDICTED: zinc finger protein 622 isoform X1

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K14816 REI1; pre-60S factor REI1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815113.1 True 2697 mRNA 0.49 7 5705604 5718217

Neighbor

gene id symbol gene type direction distance location
march11 march11 coding downstream 6364 5684216 ~ 5699240 (-)
basp1 NA coding downstream 218943 5423991 ~ 5486661 (-)
LOC120568537 NA coding downstream 556903 5108041 ~ 5148701 (-)
efr3a efr3a coding downstream 641750 4895261 ~ 5063854 (-)
si:dkey-7l6.3 NA coding downstream 1178423 4519361 ~ 4527181 (-)
LOC120567975 NA coding upstream 92109 5810326 ~ 5812362 (-)
LOC120567973 NA coding upstream 124312 5842529 ~ 5868410 (-)
LOC120568924 NA coding upstream 156235 5874452 ~ 5885417 (-)
LOC120568045 fam134b coding upstream 169810 5888027 ~ 5917140 (-)
nol7 NA coding upstream 259064 5977281 ~ 5982538 (-)
G112245 NA non-coding downstream 1030 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 7663 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 47242 5652999 ~ 5658362 (-)
G112212 NA non-coding downstream 318853 5386550 ~ 5386751 (-)
G112197 NA non-coding downstream 505496 5199742 ~ 5200108 (-)
G112253 NA non-coding upstream 2440 5720657 ~ 5721970 (-)
G112332 NA non-coding upstream 56196 5774413 ~ 5791763 (-)
G112352 NA non-coding upstream 204530 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 364424 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 395245 6113462 ~ 6116144 (-)
G112233 NA other downstream 36917 5664004 ~ 5668687 (-)
G112046 NA other downstream 1421521 4267538 ~ 4284083 (-)
G112043 NA other downstream 1466934 4238102 ~ 4238670 (-)
LOC120568325 NA other downstream 2072205 3629565 ~ 3633399 (-)
LOC120568522 NA other downstream 2120078 3564546 ~ 3585526 (-)
LOC120568546 NA other upstream 5516 5723733 ~ 5746081 (-)
G112328 NA other upstream 74946 5793163 ~ 5852447 (-)
LOC120567959 NA other upstream 454064 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 977393 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1238223 6956440 ~ 6990122 (-)

Expression


Co-expression Network