zgc:110269 (LOC104959814,LOC103356596,LOC100702321)


Basic Information

Item Value
gene id zgc:110269
gene name LOC104959814,LOC103356596,LOC100702321
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33338274 ~ 33347216 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815128.1
GCAATGCTGACCCCTGCTGCTCCGTCCGCGGTCACACCAGGAAGACGGTCCAGGGATTTAAACTTGACATCGTTGTAGAGAGTATTCCTTAAGAACCGAAGCAGTGGTGCTACTACTGGCTACTAATGGGCATCACCAAACTGGCGGATTTGATCCGCCTAGATGCTCCCGGTGCTATTTCTCACAAGGATATCAGTGACTACACGGGAAAAGTAATCGCACTGGATACCTCCATTGTTATGAACCAGTTCCGTGCAGCGACGCCTTCCCTGAGTCCCCTGACAGGTCTCTTCTTCCGCACGCTCACCTTCCTGGAACATGACATAAAGCCAGTCTTTGTGTTTGACGGGAAGCCTCCTGGGGAAAAGACAGCTGTCCTTGAGAAGAGAGCTGAGACAGCTGGTATGAGGTCCCCCAATCTCACAGGCACAGCATCATCCCAGACCAAAGATTGTCTCCAACTCCTGAAGCTTCTGGGTGTACCTATCATCCAGGCCCCAGGGGATGCTGAGGCGATGTGTGCCTGGCTGGTGAGAGAGGGGACTGTGGACGCTGTGGCATCAGAAGACATGGACACACTACCGTTTGGAGCCAATATTCTCATTCGCCAGCTGAACGCTAAGAAGGACAGtGATATCATTGAATATTCTTTACCCAAGCTGTTAGAGAAACTCCAAATTAGTCACGAGGAGTTTGTTGACCTTTGTATTTTGTTGGGCTGTGACTACTGTGACAAGATAGCCGGTTTGGGTCCTAGGAGAGCTCTGACACTGATCCAGAAGCACCGTACCATTGAGAATGTGGTTTTGCATATCAACAGACAGACCCATCCTGTGCCACATTTCTGGAAGTTTGAAGAAGCACGGAAGATATTCTTGGGTGCACCACAAACCATGGCTCCTGAACTCACCTGGACTGAGCCAGATGAAGAAGCCTTGGTTCGGCTCCTCTGTCACGTCAAACACGTGAGACAGGACAGGGTCCGTCAACGAATGGAGAAGTTCCGTCAGACGCGGGAAACTAAGCGGGaggagagggaaaaggagagggcagcaggacgtagcaagCAGACTCGCATGGAGGACTTCTTTAGAGTTACCAGAAAGAGGGAGCAGACTGTGGAAGCTGCAGACTCTTCAAGCAGCAAAAGAAAGAGACCAAAGTCAAAATAAGGCTGCCACCATCTCCCGCTTGCTGCCTCCACCATCAAAGTTGGAAGTTTTCAACGCCTTTCCAAATATCTCAAACAATCATGAAAAAAACAGGCATCTTGCAAGACATTGACTTCAAGTCTTTGTTTCTGCATGGGAGAACTACCCCCCCACTGACTATACAATAATCTGATCTTGCCTTAACAGCAGTGTTTGCAACAATGCAGTTCTACCAGGAAAAGCAGAGCAGGCGATGGACGGCTATGAAAGAGAACAGTGGATCACTGTCAGGGAGGCCTTCTCTCCAGCCAGAACTGGAGACAGGGGATGTCTCATCAGTAGATATTCAATGAGCACCTGTTGTGTAAAGGGTGCCAAGGCATAGACCAAGGACTTGAATTTTAAAACATGCACCACAAAGTAGTATCATGTCAAAAAGAGATGGTGAGATGTttaaatgaagacattttttttttattattatttttgaaataCTTGTAAATACAGTATACACTGTATGCTTTAtatcagggatcttcaacagggggtcctcagagtcaatgcaagggggcctccaaattattgttaattttattttatttttttcaatgaatccaacatattattagcaaatatt

Function

NR:

description
probable flap endonuclease 1 homolog isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815128.1 True 1788 mRNA 0.47 12 33338274 33347216

Neighbor

gene id symbol gene type direction distance location
LOC120567979 LOC103356688,LOC105925287,LOC106536587,LOC108244514,LOC104948911 coding downstream 522 33326206 ~ 33337752 (-)
fbxo36b LOC100702589,LOC104964148 coding downstream 12637 33321890 ~ 33325637 (-)
grk7a grk7,LOC104920904,LOC102788793,LOC103356827 coding downstream 25544 33304779 ~ 33312730 (-)
LOC120568969 NA coding downstream 67746 33257270 ~ 33270528 (-)
LOC120568460 LOC101482682,LOC100703124,LOC102296331,LOC102790639,LOC103357352 coding downstream 133423 33202881 ~ 33204851 (-)
sept2 sept2,LOC101486671,LOC102196852,LOC100702055,LOC102290758,LOC107693718,LOC107722571 coding upstream 19402 33366618 ~ 33380561 (-)
LOC120567699 NA coding upstream 38547 33385763 ~ 33401323 (-)
gtf2b gtf2b coding upstream 173490 33520706 ~ 33532712 (-)
znf644a znf644,LOC103355709 coding upstream 213984 33561200 ~ 33577842 (-)
glmna glmn,LOC102782615 coding upstream 264397 33611613 ~ 33622422 (-)
G119852 NA non-coding downstream 3732 33334224 ~ 33334542 (-)
G119847 atp1b3,LOC104945299 non-coding downstream 42113 33292760 ~ 33296161 (-)
LOC120568465 NA non-coding downstream 161515 33172839 ~ 33176759 (-)
G119686 NA non-coding downstream 365271 32972675 ~ 32973003 (-)
LOC120568464 NA non-coding downstream 398114 32938701 ~ 32940160 (-)
G119861 NA non-coding upstream 34538 33381754 ~ 33381998 (-)
G119881 NA non-coding upstream 152418 33499634 ~ 33499953 (-)
G119895 NA non-coding upstream 168577 33515793 ~ 33516158 (-)
G119896 NA non-coding upstream 169960 33517176 ~ 33518156 (-)
G119916 NA non-coding upstream 208368 33555584 ~ 33556012 (-)
LOC120568437 NA other downstream 81337 33217190 ~ 33256937 (-)
zgc:66427 LOC103370245 other downstream 349715 32979206 ~ 32988559 (-)
G119631 LOC104961532,LOC101466547 other downstream 473000 32849719 ~ 32865274 (-)
LOC120567697 copa,LOC103137970 other downstream 505765 32828364 ~ 32832509 (-)
fcer1gl NA other downstream 573063 32760969 ~ 32765211 (-)
selenof selenof other upstream 74173 33421389 ~ 33433925 (-)
gfi1aa gfi1,LOC100698183,LOC101467858,LOC102203194,LOC102781835,LOC106958274 other upstream 297879 33645095 ~ 33649517 (-)
G119989 NA other upstream 307086 33654302 ~ 33659276 (-)
G120168 LOC105912833 other upstream 881410 34228626 ~ 34229050 (-)
G120230 NA other upstream 1053607 34400823 ~ 34404013 (-)

Expression


Co-expression Network