LOC120567987 (LOC104918277)


Basic Information

Item Value
gene id LOC120567987
gene name LOC104918277
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23981680 ~ 23983971 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815147.1
GAGCCATATGTGCTGTTACAGCTTTGGTGCAGTTCTAATACCACAATGCAGCTTTTTAAATATCTGTTTGGTGTGATGGTTGTAGTTGTTGCTTTGGCTTGTGATGTTACTGCCCAGCATCACTGGATGTTACCTCACCAGCAAAACCaacctcctcttccttctcagCGGTCTCAGCAACCATTTACGGTCCCTCCACCTGCAGCTCCCTTTGATAAATGCCAGGTGACACAGGCAAACAAGATCCAGTGTGGGACTGAAGAGATCACTGCTAAGCAGTGTAAAAACATAAACTGCTGCTTTGATGGGCAGCAGTGCTACTATGGGAAAGCAGTGACTGTGCAGTGCACCAGGGATGGTCAGTTTGTGGTAGTCGTGGCTCGAGATGCCACTTTGCCCCACATAGATGTGGAGTCAGTCAGCCTGCTGGAAACAAATGACCCCTCCTGTACCCCTGTGGGCGTCACCTCTGCTTTTGCCATCTTTCAGTTCCCTGTTACTGCATGTGGTACTACACTCAAGGAGGATGAGAGTTACGTGGTATACGAGAACCACATGTCTTCTTCGTATGAAGTGGGAACTGGATCCAGAGGATCAATCACCAGGGACAGCCATTTTGAGTTATTGTTTCAGTGTAAGTATTCTGGCTCAGCTGTGGAGGCTCTCATTATGGAGGTGAATACTGTTCCTCCACCTGTGCCGGTTGCTGCTGCAGGACCTCTTAGAGTGGAGCTCCGACTGGCCAATGGGCAGTGTCACTCAAAGGGGTGTGTGGAGGAAGAGGCAACGTATAGCTCCTTCTACACTGCAGCAGACTACCCAATCACTAAAGTGCTGAGAGAACCTTTGTATGTTGAGGTGAGCATCTTGGAGAGGTCTGATCCGAACCTTGTTCTGAACCTGGAGCACTGCTGGGCCACCTCTGCACCCAATCCTCACAGCCTGCCGCAGTGGGACCTTCTGGTTGACGGCTGTCCCTATCATGATGACCGTTATTTAACCACAGTGGTTCCTGTGGATGGCTCCTCTGGGCTTATTTACCCAACGCACTACAAACGTTTCATCgttaaaatgttcacatttgTGGATCAAAACACCTTTTCTACGAAGCAAGATGCGGTGTTCATCCATTGTGCTACAGCAGTGTGTTATCCCAGCAGCACAAACTCCTGTGAGCAGCCATGCCAGCAACAACGAAGAGCTGTGGCTGCAATAAGGAAAGTTTCCTCAAGTCGGAGGGCTGTAGTATAGCTGACTGAGCAGAGAATATCTGCTCCTTTCAAATCCGAGAGATGACAGTCAGATCTGGCAGCCAAATTTaaccttttttaataaaaagcttGTTAAAAGCTCATGTTTACAACTGG

Function

NR:

description
PREDICTED: zona pellucida sperm-binding protein 4-like

GO: NA

KEGG:

id description
K19926 ZP1; zona pellucida sperm-binding protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815147.1 True 1367 mRNA 0.49 8 23981680 23983971

Neighbor

gene id symbol gene type direction distance location
thpo NA coding downstream 18353 23960077 ~ 23963327 (-)
LOC120567986 LOC104965059,LOC103366714 coding downstream 22607 23948703 ~ 23959073 (-)
per2 LOC103366709 coding downstream 47876 23916741 ~ 23933804 (-)
itm2cb itm2c,LOC103366712 coding downstream 68916 23905846 ~ 23912764 (-)
trnap-agg_8 NA coding downstream 112454 23869155 ~ 23869226 (-)
fam131a NA coding upstream 22403 24006374 ~ 24012550 (-)
eif4g1a NA coding upstream 29706 24013677 ~ 24035521 (-)
LOC120569137 NA coding upstream 36391 24020362 ~ 24020438 (-)
LOC120569138 NA coding upstream 37468 24021439 ~ 24021501 (-)
tfa NA coding upstream 52923 24036894 ~ 24044424 (-)
G117372 NA non-coding downstream 40886 23940225 ~ 23940794 (-)
G117369 NA non-coding downstream 43573 23934919 ~ 23938107 (-)
G117343 NA non-coding downstream 84769 23895975 ~ 23896911 (-)
G117342 NA non-coding downstream 85910 23895519 ~ 23895770 (-)
G117341 NA non-coding downstream 86579 23894159 ~ 23895101 (-)
G117501 NA non-coding upstream 211336 24195307 ~ 24199562 (-)
G117505 NA non-coding upstream 225578 24209549 ~ 24212225 (-)
G117507 NA non-coding upstream 229866 24213837 ~ 24216457 (-)
G117514 amotl2 non-coding upstream 256650 24240621 ~ 24242247 (-)
G117553 NA non-coding upstream 355111 24339082 ~ 24462553 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 125059 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 490068 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 550688 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 620100 23345718 ~ 23361580 (-)
G116969 NA other downstream 1713121 22261998 ~ 22268559 (-)
G117560 NA other upstream 515409 24499380 ~ 24536496 (-)
G117732 NA other upstream 938232 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 2331799 26315770 ~ 26319595 (-)
G118175 NA other upstream 2677650 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 2835867 26819838 ~ 26824570 (-)

Expression


Co-expression Network