sema4e (LOC103364382)


Basic Information

Item Value
gene id sema4e
gene name LOC103364382
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 27329082 ~ 27338096 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815153.1
TTATTTTTCTACCTCGCCCATCTTGAATCAGCTGTGCTCTCCACCGACAGACAAAAGTATATGGGGACCAGGAAAACGTAATCAGACCTTAGATCCGCGTCTTGCGCTGCCTCAACGGCAGTTTGAAgggagtataaaaaaaaaaaactgcgcgGGGCCAACCGGAGCAGCAGCCAGCCATTCAGACCCTTTTCACCGCGGGATGTGAGCGCTGAGAGTCTCTCTACAATAACGGATGACTGCTGTGACTTTGAGAGGACCCGACAGAGACAGACCGGCTTCtcaactgttagagaggcggtTTTTCCCCCTGATGTCTGAGGTTTAGCTAGAGAAGTAAAAACCTGCCGCGTTTCTACGTTAAAGGAAGTTGCAAGCTAGCGCGAAGTTTTACATCTCCGCGTACGTTAAGCTTtagcaaggtgtgtgtgtgtgtgagggaatTACACTTCTCAGCCGTTTAGAAATATTATGAGTTTGTTTTACTACCAGCTTGTTGGTTAACGAAGAGGTAGCTTATGGTTTAGAAATTACGTTTAAACAGGTGTTGGGACTAATTTTTGAATGGAAACCTCCGCAGTCTTGGGCGTGTCTGAGAGCAGCCCTCCTCGGCTTTGTTtctttggtctgtgccatccaTCTCATCATGGACAGCCTGCTGAGCGGGGCCAGTAAAGGGGCCAGTGCCCTTGAGTCCGCACAGATCTCATCACGTCATAGATGCCGCTCGCTCACTTTGCCCCTGTATGAGTGACTGTTAAGGAAACAATAAAGCTTAAATTCCTCTTCGTTTGAACAAAAAAGCCATGCATCTGCTGCCGGCCCTCTATGTCTTTTGGCCGCTGGCCCTGGCCTTGGCGCTGGAAGAAGACTCACCACTGGACTGTGTCCCCCGTAGATCTGTGCCCTACCATAGGAACAACGCTCACCTGTTTCACGAGAAGGGAGTGTTCAACTACTCCACCATGCTGTTGAGAGAAGATCTGGACCTGCTATTGCTGGGTGCCAGGGAGGCAGTGTATGCTCTTGACCTCAACGACATCTCCAAAAAACTTGCTTCAGTTAAATGGGAAGTGACGCAAAAGCAAAATGATGATtgtaaaaacaaaggaaaagatCCTGAGATGGAGTGCAAGAACTATATCAGGATCCTGCATCAGACGCAGGACAACaggatgtatgtgtgtggaacaAATGCTTTTGATCCCGAGTGTGATTACATGTCCTACGCAGATGGAAACCTGACTCTGGAGAAGAGACGAGAGGATGGCAAAGGGAAGTGTCCATTTGATCCTTTCCAGAGATATGCCTCCATCATGGTTGAAAACAGCTTATACTCAGCCACTTCAATGAACTTCCTTGGCTCTGAACCCGTCCTGATGCGCAGCTCTTCTGTCGCCATACGCACTGAGTTCAAGAGCTCCTGGCTTAACGAGCCCAACTTTGTTTCCATGGCTCAGATGCCAGAGAGTTACATGAGTGAGGCGGGAGATGATGACAAGGTTTACCTGTTCTTCAGCGAGACGGCAGTGGAGTGCGACTGCTACAACAAACTGGTGGTTTCCCGTGTGGCCCGCGTCTGCAAGGGGGATCTCGGAGGTCAGAGGACCTTGCAGAAGAAATGGACATCCTTCCTGAAGGCCAGAATGGACTGTCCAGTGCTGGAGTCTCAGCTGCCGTACATTATTCAGGACACTTACCGCTCGTGTGACCCACAGCAGCCCTGGAAGGACTGTTTGTTCTACGCCATCTTCACACCACAGTCggacACATCAGACCTGTCTGCAGTGTGTGCGTACCGCGTGTCTGACATCAGCAGAGTGTTTGCAGAGGGGAAATACAAGACCCCAGTCACTGTAGAAACCTCTTTTGTTAAGTGGGTTATGTACAGCGGAGATGTCCCAGTCCCTCGGCCCGGAGCTTGTATAAACAACGCGGCTCGTAAAATGGGTATAAATCAGACCCTGCACCTCCCAGACCGGACCCTTCAATTTATCAAAGATAGGCCCCTCATGGACCAAGCTATCCAGCCAATAGGAGAGAAGCCTGTACTGGTGCGAAAGGGAGCTACATTCACACGCATCCTAGTCAACCAAGTGCAGGCAGCAGATGGAGAGAAGTACCATGTGATGTTCATAGGCACAGAGGAAGGCTCATTGCTGAAAGCAGTGAACTACGATGGAGAGATGTTCATCATAGAGGAAGTGCAAATCTTCCAGCCCCCAGAGCCAATCAAGATTCTGAAATTCTCTGATGTCACGGGTCAGCTGTATGCGGGCTCAGACTACGGAGCAGCACAGATACCACTGGCCACCTGTGGGAGGTCCTCATCCTGTCTGGACTGTGTTCTAGCCAGAGACCCATACTGCGGCTGGGACAAGGCTGTTGGGAAATGTCTTGTCCTTTCTAATTCACAAAGAGAACTAATCCAAAGTGTGAAAGAGGGAAATGCCACTCTGTGCCCACATGCTGatCCTGTGAAGCCTATGAATGTGTCCATCTGGCCCGGCGGAAACCTGAAGCTCCATTGCCCTTCGCCTTCCACCCTGGCGAAAACCAGTTGGAAGCGGGACGGCAGCCCTCTGACGCCTTTGACTCGCCATCAGCTTCTACAGGACGGACTGCTCATCCTCAATGCCACAGACTCCGACGGCGGTCGATACCGCTGCCTGTCTGTGGAGCCCTCCAAGGCCGGCGAGTACACGACCACTGTGGCCGAGTACCAGGTTAGCGTGGCTTCAGCGGAATCTAAGGATGGGAGACAGATTTTTCCCCAGGCTCAGATGGATGGCCCCTCTGTGGCTGGACTGCAGGCCATAGTCGGGCTCCTGGTAGTTTCCCTTCTTGCCCTTTTGGCTTGGAATCTTTACAAAGGCCACCTACCGCTGCCCTGGAACTGCAGAAAGAAGAATAGAGAGCAATCCCAGGAGACTCCTGAGCAGGGGGGTCTGAACACCAGCGTGGCCTACCAGGATGCACTGAGGCCTGCACTGGCAGAGGACAAGCCCCTGGTGTCGGGAACAAACAACGGCAGTAATAACCACCACACCGGGGGGGAGGCGGCATTCAGCGCGGCTGAGGAGGAGAACGGCCCAAAAGTTCTTCTTCCATCTCTGCAGTATATTGATGACGAGTCAGAAATTTGAAAATGACAAGCGCATTACTGTGATAGGTTCTACTTGTACAGTCTATAGCCCTATTCTCACAGTACTcttattacctggggacctctagTAATTTTGTAATCATTGCCGAGGTCATCTAAGATCTTAATTTGCCAGGTAAAAATTCCACCGCAAATGCCGCAAAAACCTACCATATTTTGCCAAACAGAGGTTGTGTGATAATGTGttaggtttttttttagtttgttgtTAATTGTTAGTACAGTTGTAATATTGGCGTTGAAATCTCACTTTATGGGAGCTTGAAATATTCTGAGTGGTTGAAAGTTGTTGCGAGAGAGAACCACCAAAAGATTCTATAATTATTTGTAAAAGCATGAGGGACATATGAATTTCTGCCTgacttttgttttactttcagtacattTCAGTGTTTTAGCTTGCTACTAATTGTTGTAAATCCTATTCTTATAAATTGAAATATCTTCCAAGATTTGTCTGATGATTGTACAATAACTGATATTGAGCCATTTCATTTTTAACCACTAGCTGCAAAAGATTGTTATTAAACCTTTTCTACCTTGTGTTGTTCCAGTGTATCTAAATATAGCCAACATAGTTTACTAGCTTTCAACAAGAC

Function

NR:

description
PREDICTED: semaphorin-4E-like

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815153.1 True 3765 mRNA 0.49 15 27329082 27338096

Neighbor

gene id symbol gene type direction distance location
LOC120567993 LOC104929644,LOC104964218,LOC103364385,LOC106951435 coding downstream 11487 27310305 ~ 27317595 (-)
sirt6 sirt6 coding downstream 21422 27295370 ~ 27307660 (-)
LOC120567764 LOC107384141,LOC100708490,LOC108239462,LOC107096963,LOC101482186,LOC106526414 coding downstream 67736 27252534 ~ 27261346 (-)
LOC120567762 LOC101482480,LOC102795251 coding downstream 84641 27211015 ~ 27244441 (-)
onecut3b onecut3,LOC103366680,LOC106923038,LOC107096950,LOC102305143 coding downstream 221356 27095802 ~ 27107726 (-)
stap2a LOC103364380,LOC104964213 coding upstream 1015 27339111 ~ 27344282 (-)
LOC120567871 sh3gl1 coding upstream 6466 27344562 ~ 27360321 (-)
LOC120567870 LOC104929640,LOC103364379 coding upstream 25457 27363553 ~ 27381615 (-)
LOC120568100 LOC103364377,LOC100710107,LOC102776083,LOC107384130,LOC103151230 coding upstream 61350 27399446 ~ 27432930 (-)
LOC120568101 NA coding upstream 104050 27442146 ~ 27454453 (-)
G118401 NA non-coding downstream 33782 27294283 ~ 27295300 (-)
G118339 NA non-coding downstream 129393 27198582 ~ 27199689 (-)
G118337 NA non-coding downstream 131434 27174552 ~ 27197648 (-)
G118482 NA non-coding upstream 240872 27578968 ~ 27609694 (-)
G118483 LOC103364371,LOC101475014,LOC102207447,LOC108239424 non-coding upstream 264305 27602401 ~ 27605241 (-)
G118504 NA non-coding upstream 289790 27627886 ~ 27664712 (-)
G118608 LOC103372824 non-coding upstream 756927 28095023 ~ 28099810 (-)
G118613 NA non-coding upstream 806332 28144428 ~ 28145034 (-)
cirbpa cirbp other downstream 504512 26819838 ~ 26824570 (-)
G118175 NA other downstream 663130 26661621 ~ 26665952 (-)
camk2n1a camk2n2 other downstream 1009487 26315770 ~ 26319595 (-)
G117732 NA other downstream 2405764 24922203 ~ 24923318 (-)
G117560 NA other downstream 2792586 24499380 ~ 24536496 (-)
LOC120568986 epha4,LOC100711706 other upstream 305231 27643327 ~ 27675360 (-)
G118524 NA other upstream 375371 27713467 ~ 27718759 (-)
metap1d metap1d,LOC102783095 other upstream 808175 28146271 ~ 28152770 (-)
G118764 NA other upstream 1647995 28986091 ~ 28986319 (-)
G118856 NA other upstream 2082283 29420379 ~ 29420652 (-)

Expression


Co-expression Network