tada1 (tada1)


Basic Information

Item Value
gene id tada1
gene name tada1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14259786 ~ 14266899 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815165.1
TATTTTTCGTCCCGTTCAactcatagacagtatggttcAACTTCAAAAAAAGGGTAACATCATAGACGGGTAACATCACTTGGCGTCGCCGGATGATGACGTACTTGTAGGCCTTTGAACGCCATGGCCGCTCATGCTAGCGAGCTTGAGATTGCGAAGAAGAATTTAACTGATGCAATTGGCGATAATGTCAAGCATTACTGGGCAAACCTGAAGCTATGGTTCAAACAAAAGATCAGCAAGGAGGAGTTTGACATTGAGGCACGTCGTCTGTTGGCACAGGAGAATGTCCATGTTCACAATGATTTTCTCCTGGCCATTCTCACACGCTGCCAGATCATTGTCTCCACACCAGATGGCGCAGGGCCATTACAGTGGCAAAGTGGCTCTGCTTCAAAGCCTGGCAAACCAAAAGGGAAGAAGAAATGTTCCTCTAGACAGAAATTTGATCATCGTTTCCAGCCACAGAACCCTCTGAGTGCCGCCCAGCCTTTCAGCCCTCGGGAGGTGggaggtgaggaggaggagctgcGTCTCAGTGCCCACACTCTGTTGTTGCCCACGCGGGGCCAGCTGGAGGCCCGCATGATGGTGACGGCATTTGAGCTGGGACTGGATAACATCACAGAAGATGCCGTCGGCAGCATGATTTATGCTGTTGAGCACCACTTGAAAGATGTCCTGACTGCTGTCATCACCCGGAGGAAGGCGTATAGGTTACGAGATGGTCGCTTCCTCTATGCCTTTGGCAGTGATGTCACACTGCAGCCATATCTGAAAAACAGCCTGGCTGCTTACCACAGTGTTACTGAATGtCCCCCTCCAAGTGCTTCTCTCCCTACAGGCCCACCACCTCAGGTGTCACCTGATGAGGCCGAGCAACGAGCTGTTCACCTATTGGCTTGTTCTGCCGACAGTCTCCCCGCACCCCTCCCTCCAATCAGCATGTTTGATCTCCTGGAGGCTTTACAGGTTCACCACGGTGTGATGCCCTCCCACACTATGTATGCCCTGAACATGGAGCGCATCCTGTCACGGCTCTGGCACCCCAGCCACGAAGAACTAGAGCAGGACCACGTACACCGGCAGCGCCTCGCTGCGAAAGAGCGCATGCTCGTCAGCTGAGAACCACTGATGCAGGACTGTACGTGAACCGCGGCTATCATCAGGAACCAAACAAATGATTTCCCCACGGGGAAATGGATGGGGGAACAGTGTGTCTGAAgacctatttttctttttttttatttatttttttataatacctGTAAAATCCCATCCCCCGTTGCACAAAGAGATAATGCATAAGTGGAGTGAGATGAAACAAAACCGTTGGACAGTGGACACAGAGTGGGTAGTCAACTCCAGCCAATAGCTGGCAAATTATTTTTGTCTGTTCCACAGGCCATTGTGGCAATCGACCAACCATCATTTGGAACTTCTGTTATATAGTGGGTGATACTTTAATTTTGGAATATACCAGCAGCTATGAGCACTGGACAGGAAAATAAGGTTATTATGCAGCATTGTGAACATGACCAGCTagcaaagattaaaaaaaataaaatctatgaAACAGCCCTgtacattacacacaggtgttttTACTTAGTCTGGCTGATTATACCTCATCTCAGGTTGAAGTTGAAGGCATCGCTGTGATAAGAATTACGTGAGGTGAGGTCATCTAACTCGCGCACAACTAAAAATGAGGAAGATGGAAATTGTCCCGCCTTAGCAGGTGCAACACACCTGTGTGGGTTTACTGTGGCTGTGTAGGGTCCTTAACAATGTGTCTGGCAGCTGCCACCTATGTATGTCATCACGCCCCTCATGAACATACCTTGACATTGTCTCCAAAGTTTTCCTAAAACATTTACTGGTGTCTGGTTTAAAGGCCGACGAGCATCCATCAGTGTTGGTGGTCCACAATGTGTGTACAGATTTagctaatatttttattttttttttatgtctcagTGCACTTGAATATGCGTTGTTCATGTTTGTGTGCAGCATCTAGTTCAGGTTGAAAAGTGTGTACAtttggacctttttttttttattttattttttttctacacaaattttgttttgtaatttcTATTACAGAAAGTAgttcagaaaataaataaaaatgcatttttctgtA
>XM_039815166.1
ATATTTTTCGTCCCGTTCAactcatagacagtatggttcAACTTCAAAAAAAGGGTAACATCATAGACGGGTAACATCACTTGGCGTCGCCGGATGATGACGTACTTGTAGGCCTTTGAACGCCATGGCCGCTCATGCTAGCGAGCTTGAGATTGCGAAGAAGAATTTAACTGATGCAATTGGCGATAATGTCAAGCATTACTGGGCAAACCTGAAGCTATGGTTCAAACAAAAGATCAGCAAGGAGGAGTTTGACATTGAGGCACGTCGTCTGTTGGCACAGGAGAATGTCCATGTTCACAATGATTTTCTCCTGGCCATTCTCACACGCTGCCAGATCATTGTCTCCACACCAGATGGCGCAGGGCCATTACAGTGGCAAAGTGGCTCTGCTTCAAAGCCTGGCAAACCAAAAGGGAAGAAGAAATGTTCCTCTAGACAGAAATTTGATCATCGTTTCCAGCCACAGAACCCTCTGAGTGCCGCCCAGCCTTTCAGCCCTCGGGAGGTGggaggtgaggaggaggagctgcGTCTCAGTGCCCACACTCTGTTGTTGCCCACGCGGGGCCAGCTGGAGGCCCGCATGATGGTGACGGCATTTGAGCTGGGACTGGATAACATCACAGAAGATGCCGTCGGCAGCATGATTTATGCTGTTGAGCACCACTTGAAAGATGTCCTGACTGCTGTCATCACCCGGAGGAAGGCGTATAGGTTACGAGATGGTCGCTTCCTCTATGCCTTTGGCAGTGATGTCACACTGCAGCCATATCTGAAAAACAGCCTGGCTGCTTACCACAGTGTTACTGAATGtCCCCCTCCAAGTGCTTCTCTCCCTACAGGCCCACCACCTCAGGTGTCACCTGATGAGGCCGAGCAACGAGCTGTTCACCTATTGGCTTGTTCTGCCGACAGTCTCCCCGCACCCCTCCCTCCAATCAGCATGTTTGATCTCCTGGAGGCTTTACAGGTTCACCACGGTGTGATGCCCTCCCACACTATGTATGCCCTGAACATGGAGCGCATCCTGTCACGGCTCTGGCACCCCAGCCACGAAGAACTAGAGCAGGACCACGTACACCGGCAGCGCCTCGCTGCGAAAGAGCGCATGCTCGTCAGCTGAGAACCACTGATGCAGGACTGTTTCCTCGAGTCACCAGCTGTAGTTGGAGGGCTGTGACGCACGCATACACCCGTCCCATTGCGCATTGAGGACCCCTTGCCATATTTGGCTGCTTGCTGCTCACTTCCGACATTACGCTGTCCAATGAGAGGCCGTGTAGATTCACCAACAATTACAAGCACTGTGGTGACTCAATATCCCGT

Function

symbol description
tada1 Predicted to enable transcription coactivator activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be located in nucleus. Predicted to be part of SAGA complex. Orthologous to human TADA1 (transcriptional adaptor 1).

NR:

description
PREDICTED: transcriptional adapter 1-like

GO:

id name namespace
GO:0070461 SAGA-type complex cellular_component

KEGG:

id description
K11317 TADA1, STAF42; transcriptional adapter 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815165.1 True 2152 mRNA 0.46 8 14260029 14266898
XM_039815166.1 False 1329 mRNA 0.53 9 14259786 14266899

Neighbor

gene id symbol gene type direction distance location
fggy fggy coding downstream 5249 14238716 ~ 14254537 (-)
LOC120567997 LOC104927432,LOC101487132,LOC102794113,LOC102204900,LOC100692642,LOC102311096,LOC103365877 coding downstream 26086 14230436 ~ 14233700 (-)
dnm3b LOC104927414,LOC102288810,LOC102208633,LOC103366040,LOC101463593 coding downstream 44332 14191963 ~ 14215454 (-)
LOC120567994 NA coding downstream 69677 14172146 ~ 14190109 (-)
LOC120568588 c8b,LOC102794687,LOC102209383 coding downstream 147665 14056500 ~ 14112121 (-)
angptl1b LOC103365434,LOC104967899,LOC101486078 coding upstream 6943 14273842 ~ 14284719 (-)
LOC120568246 lrrc52,LOC102792645 coding upstream 37579 14304478 ~ 14312810 (-)
LOC120568148 NA coding upstream 54780 14321679 ~ 14330591 (-)
fzr1b LOC104927424,LOC102292505,LOC103364951,LOC102791500,LOC101485033 coding upstream 72770 14339669 ~ 14349559 (-)
LOC120568103 pde4b,LOC104954895,LOC101483836,LOC100690322,LOC102791018 coding upstream 88718 14355617 ~ 14414700 (-)
LOC120568036 NA non-coding downstream 88312 14124703 ~ 14171474 (-)
G114456 c8a non-coding downstream 204263 14049494 ~ 14055523 (-)
LOC120567953 NA non-coding downstream 311671 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 631119 13625776 ~ 13628667 (-)
G114256 LOC102077222,LOC102776852 non-coding downstream 634307 13622903 ~ 13625479 (-)
G114518 NA non-coding upstream 52444 14319343 ~ 14320763 (-)
G114530 NA non-coding upstream 151952 14418851 ~ 14466248 (-)
G114538 LOC104949927,LOC103364340 non-coding upstream 173982 14440881 ~ 14447933 (-)
G114544 NA non-coding upstream 250577 14517476 ~ 14517893 (-)
G114633 NA non-coding upstream 422558 14689457 ~ 14690066 (-)
tfr1a NA other downstream 290975 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 777561 13469531 ~ 13482225 (-)
G114152 NA other downstream 1171223 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1284458 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1491161 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 346714 14613613 ~ 14618224 (-)
G114680 NA other upstream 529019 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1023183 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 1877261 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 1915755 16182654 ~ 16201698 (-)

Expression


Co-expression Network