cables1 (cables1)


Basic Information

Item Value
gene id cables1
gene name cables1
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 20533111 ~ 20558297 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815169.1
ACACACGTGACCCCCTGTTTTCACCCAGTTAAACGCATGTACTTAAAAGACAGGCCACTGCAATTCACCAACACAAGCACGTTAACACAATATTAATGTTAGCAAGGTAAGATCGCTGCTGTGGGGATTAGGATCACTGGAAGCGGACCATGGCGGCTGCCACGAGCAGCAACACATCCACAGCCACGCTACAGACCAACCACTCCAGTATCGAGCAAACGCGGAAACGCATAGACCCGAGGAGGAGGCAAGCGGCGTTGTCTTTTCTCAGCAACATTTCTCTGGATGGGCGACCAGTGCAAGACGACCAAAACGAAGAGGATGACTCGCTTGAAGCTAGGACTAGACAGAGCCTGGTTTCTCCGGAGCGCTCGGTGTACGGGGCTGCTGCTGCGGCAGCGACCACCGCCGCCAAGGCGCTCGCTTTTGCAAACCAGGCTCTTCTCTCCAGCAGTCGGGCCAGTTTCGGGACGGGTCCCGCAGCTGCCCCGGCGGGTACAGACACGGAGGGTGACGCTTTTGTGCCCTCGACGTTCAGCTCGCCGTTCTCCGCGGTCCCAGCATCGACTAGAGGGAGGCTGCAGACGTACACTCAGGGAATCCTACCTGCCCCTTACTCCAGGCAAACCTCTCAGAACTACAGCCTGGAGGGCGTACAGATAGCCAACTCTGCGATAGAGCTGCAGAGATCAAGACGTAGACTCATCTCTCAGCGCTCTTCGCTTGAAACACTAGAGGACATTGAGGAGAATGCTCCTCTGCGCAGatGCCGAACCCTATCGGGTTCACCCCGACCAAAGAGCTTCAAGAAGATCCACTTCATAAAGAACTTGAGGCAACATGATATGCGCAATGGAAGgaTAGTCCTTATCAGTGGCAGAAGATCCTTCTATAGTGTATTTTCTGTCCTGCCCTATCGAGATTGTAGCCAAGCAGGGGATGTCAAGCTGGAAGGAGGAGGGCGTCAGCGGCACCCATCAGGAGGCGTCAGTGCCAAGGAGATGGTGATCGGGCTAGAGGGTGTGGAGTTAGGAGCTGATGGAAAGACGGTGTCTTACACCCAGTTCCTGTTTCCCACTAACGCGCTTGGTGGTCGAAGGAACACCATCGACTCCACCTCATCCTTCTCTCAGTCTCGTTACGCCAGCCATAGAAGCCTCAGTTTGGGCCGAGCTAACAGCAACCAGAGCAGCATAGACACAGGGAATGATTTGGGGGACTTCCGCGAGTATGACCCCAATCTGCTGGATGACCCGCAGTGGCCTTGCGGAAAACACAAGAGAGTCCTCATTTTCCCCTCCTACATGACTACGGTCATTGAATACGTCAAACCATCTGACCTCAAGAAGGACATGAACGAAACTTTCAAGGAGAAATTCCCCCACATAAGGCTTACACTCAGCAAGATTAGGAGCTTGAAAAGGGAGATAAAAAAGTTGGCCCTGGATGAATGTGGTTACGAGGAACCGACAGTCGCCATGGCATTCGTCTACTTTGAAAAACTTGTGCTTCAAGGCAAACTAAACAAGCAGAATCGTAAACTCTGCGCTGGAGCTTGTGTCCTGCTGGCAGCCAAGATTGGTGGCGATCTCAAGAAACACGAGGTCAAGCTCCTGATAGACaAACTGGAAGAGCGGTTCAGAGTGAACCGCAGAGAGCTGATAGCATTCGAGTTCCCGGTGCTGGTGGCGTTAGAGTTCaacctgcacctgccagaacaCGAGATCATGCCCCACTACAGACGCCTGCTGCAGACCTCCTAGCATTAGTGACCCATCAGGAGGACGACCACCAGGTTCTCCTTCTGATCCTCTGCTTCCCACCGTATCCATCCGCGTCCGCATCTGGCAGCCCTAAGGAGCCGCTGGCTGTCACTCAACTACAGCCGACAACActctccttttcctctcagAGACCTGAAATCAGCCAAAGGGGCACACATTTCTAAACCTTTCCTCCATTGTTTgactgggaaaaaaaagggtTCAACCGTCAAACAAGCTGTTTTTCTAGTTTGCATGTTTTCAAGTCTTCATCTTCACTTTGTGTATTTTAAAGCTCTCTTGTTGATTAAGAgagctttttctttttgaatcTGATGGTGAACTTGTTTTCTCAGTTAACGCAACAAATGATTGTAACATTGTTTAACATCTCTTTTCATTAATCCCCCACTTGTAAACTTTGGTATGATTGGTTGCCTCCTGATCTGCATacaatttttaaacaaaagccTTTTAAGTGGCTGTTTTTGGCTGGACTTCCTCAGAGTGACTCATTCGTTCGCAAGTTATCATCTTAAAAGTGCACTTTTGAATATTGGGAGACATAGGGGGAAGGCAGGCATTCTTTTTAGAGTTTTAATAAGATTTGGAATCTACCTTGAAAAATAAGCTGTGTTCATAaacaccacacatacagtaaatcatTTGAATAGaccttttgaattgtttttctctcttatGGTTTAGTCATTTTCTAGCCACAACTATCCGCATGAAATGTAATGATTGTTTGCATACAGGTACGTGCAGACAAGATGGGACTTCCTATTTTCACTGAAGTattccatttaattttttttaccagtCATATGCTTGCTATGAACTTACAGAGACTAGACCCACTTTTATCAGTGTCGAATTTCCTGTGCTCTATGTTAGAGTGTATTGCTAGCACATTTACGGTGCTATCAGGAAGGTAGTTTTGAAAAGGTGTTCATGAGTgcaaaaatgccattaaactgGGTCAGGATTAGCAGCAGAGTGGCAGCAGGGTGCTCTAGTGTTGAGACAAAATGTCATTGGCTAAGACCCTGTGACCGTAAATATCCTTCCTGCTttaagtgtccttgagcaaggcaccgagtTCCTTCAGGCTTCAGGGACACTTTAGCTgacctgacctctgacctctctgAGGAGGAGAAAAACTCTAAACAAGATCCAAACCGAGATAAATGACGGATCGAACATTTGCATATAACTAACTGAATCAGCATTTGTTGATTTGAAATCtaagttgttaaaaaaaaagatgaatgtgaccaatttaaaaaaaaaaaaaaaaaaaaaaatgtattgttacaTTCATTTGGCATGTACCTCaacttgattttctttttttattaccttGAAAATTGTCACACAATACCACAGAGTATTGAGGAAAAAAGGTATTTAATGCTGCTCCAAGTGTTGATGGTAATTGAACTGAAATGATCACAACATTAAACCAAATTGTAATAAAAAGCATGGATTATGCTGATTCAAGGTGAAACCGTACTGAGCTTATTTCTGTTTGCAAGTCTAAAGATTTGGCTATGAGATGCACACTAAAGACTCATGGGCGACACTTATTAcctgtgtatgtttgtaaaTAAATTGCTTTGCTTGTTCAATCAAAA
>XM_039815171.1
CACACGTGACCCCCTGTTTTCACCCAGTTAAACGCATGTACTTAAAAGACAGGCCACTGCAATTCACCAACACAAGCACGTTAACACAATATTAATGTTAGCAAGGTAAGATCGCTGCTGTGGGGATTAGGATCACTGGAAGCGGACCATGGCGGCTGCCACGAGCAGCAACACATCCACAGCCACGCTACAGACCAACCACTCCAGTATCGAGCAAACGCGGAAACGCATAGACCCGAGGAGGAGGCAAGCGGCGTTGTCTTTTCTCAGCAACATTTCTCTGGATGGGCGACCAGTGCAAGACGACCAAAACGAAGAGGATGACTCGCTTGAAGCTAGGACTAGACAGAGCCTGGTTTCTCCGGAGCGCTCGGTGTACGGGGCTGCTGCTGCGGCAGCGACCACCGCCGCCAAGGCGCTCGCTTTTGCAAACCAGGCTCTTCTCTCCAGCAGTCGGGCCAGTTTCGGGACGGGTCCCGCAGCTGCCCCGGCGGGTACAGACACGGAGGGTGACGCTTTTGTGCCCTCGACGTTCAGCTCGCCGTTCTCCGCGGTCCCAGCATCGACTAGAGGGAGGCTGCAGACGTACACTCAGGGAATCCTACCTGCCCCTTACTCCAGGCAAACCTCTCAGAACTACAGCCTGGAGGGCGTACAGATAGCCAACTCTGCGATAGAGCTGCAGAGATCAAGACGTAGACTCATCTCTCAGCGCTCTTCGCTTGAAACACTAGAGGACATTGAGGAGAATGCTCCTCTGCGCAGatGCCGAACCCTATCGGGTTCACCCCGACCAAAGAGCTTCAAGAAGATCCACTTCATAAAGAACTTGAGGCAACATGATATGCGCAATGGAAGGGATGTCAAGCTGGAAGGAGGAGGGCGTCAGCGGCACCCATCAGGAGGCGTCAGTGCCAAGGAGATGGTGATCGGGCTAGAGGGTGTGGAGTTAGGAGCTGATGGAAAGACGGTGTCTTACACCCAGTTCCTGTTTCCCACTAACGCGCTTGGTGGTCGAAGGAACACCATCGACTCCACCTCATCCTTCTCTCAGTCTCGTTACGCCAGCCATAGAAGCCTCAGTTTGGGCCGAGCTAACAGCAACCAGAGCAGCATAGACACAGGGAATGATTTGGGGGACTTCCGCGAGTATGACCCCAATCTGCTGGATGACCCGCAGTGGCCTTGCGGAAAACACAAGAGAGTCCTCATTTTCCCCTCCTACATGACTACGGTCATTGAATACGTCAAACCATCTGACCTCAAGAAGGACATGAACGAAACTTTCAAGGAGAAATTCCCCCACATAAGGCTTACACTCAGCAAGATTAGGAGCTTGAAAAGGGAGATAAAAAAGTTGGCCCTGGATGAATGTGGTTACGAGGAACCGACAGTCGCCATGGCATTCGTCTACTTTGAAAAACTTGTGCTTCAAGGCAAACTAAACAAGCAGAATCGTAAACTCTGCGCTGGAGCTTGTGTCCTGCTGGCAGCCAAGATTGGTGGCGATCTCAAGAAACACGAGGTCAAGCTCCTGATAGACaAACTGGAAGAGCGGTTCAGAGTGAACCGCAGAGAGCTGATAGCATTCGAGTTCCCGGTGCTGGTGGCGTTAGAGTTCaacctgcacctgccagaacaCGAGATCATGCCCCACTACAGACGCCTGCTGCAGACCTCCTAGCATTAGTGACCCATCAGGAGGACGACCACCAGGTTCTCCTTCTGATCCTCTGCTTCCCACCGTATCCATCCGCGTCCGCATCTGGCAGCCCTAAGGAGCCGCTGGCTGTCACTCAACTACAGCCGACAACActctccttttcctctcagAGACCTGAAATCAGCCAAAGGGGCACACATTTCTAAACCTTTCCTCCATTGTTTgactgggaaaaaaaagggtTCAACCGTCAAACAAGCTGTTTTTCTAGTTTGCATGTTTTCAAGTCTTCATCTTCACTTTGTGTATTTTAAAGCTCTCTTGTTGATTAAGAgagctttttctttttgaatcTGATGGTGAACTTGTTTTCTCAGTTAACGCAACAAATGATTGTAACATTGTTTAACATCTCTTTTCATTAATCCCCCACTTGTAAACTTTGGTATGATTGGTTGCCTCCTGATCTGCATacaatttttaaacaaaagccTTTTAAGTGGCTGTTTTTGGCTGGACTTCCTCAGAGTGACTCATTCGTTCGCAAGTTATCATCTTAAAAGTGCACTTTTGAATATTGGGAGACATAGGGGGAAGGCAGGCATTCTTTTTAGAGTTTTAATAAGATTTGGAATCTACCTTGAAAAATAAGCTGTGTTCATAaacaccacacatacagtaaatcatTTGAATAGaccttttgaattgtttttctctcttatGGTTTAGTCATTTTCTAGCCACAACTATCCGCATGAAATGTAATGATTGTTTGCATACAGGTACGTGCAGACAAGATGGGACTTCCTATTTTCACTGAAGTattccatttaattttttttaccagtCATATGCTTGCTATGAACTTACAGAGACTAGACCCACTTTTATCAGTGTCGAATTTCCTGTGCTCTATGTTAGAGTGTATTGCTAGCACATTTACGGTGCTATCAGGAAGGTAGTTTTGAAAAGGTGTTCATGAGTgcaaaaatgccattaaactgGGTCAGGATTAGCAGCAGAGTGGCAGCAGGGTGCTCTAGTGTTGAGACAAAATGTCATTGGCTAAGACCCTGTGACCGTAAATATCCTTCCTGCTttaagtgtccttgagcaaggcaccgagtTCCTTCAGGCTTCAGGGACACTTTAGCTgacctgacctctgacctctctgAGGAGGAGAAAAACTCTAAACAAGATCCAAACCGAGATAAATGACGGATCGAACATTTGCATATAACTAACTGAATCAGCATTTGTTGATTTGAAATCtaagttgttaaaaaaaaagatgaatgtgaccaatttaaaaaaaaaaaaaaaaaaaaaaatgtattgttacaTTCATTTGGCATGTACCTCaacttgattttctttttttattaccttGAAAATTGTCACACAATACCACAGAGTATTGAGGAAAAAAGGTATTTAATGCTGCTCCAAGTGTTGATGGTAATTGAACTGAAATGATCACAACATTAAACCAAATTGTAATAAAAAGCATGGATTATGCTGATTCAAGGTGAAACCGTACTGAGCTTATTTCTGTTTGCAAGTCTAAAGATTTGGCTATGAGATGCACACTAAAGACTCATGGGCGACACTTATTAcctgtgtatgtttgtaaaTAAATTGCTTTGCTTGTTCAATCAAAA

Function

symbol description
cables1 Acts upstream of or within nervous system development. Is expressed in nervous system. Orthologous to human CABLES1 (Cdk5 and Abl enzyme substrate 1).

NR:

description
PREDICTED: CDK5 and ABL1 enzyme substrate 1 isoform X1

GO:

id name namespace
GO:0051726 regulation of cell cycle biological_process
GO:0045859 regulation of protein kinase activity biological_process
GO:0051302 regulation of cell division biological_process
GO:0007399 nervous system development biological_process
GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815169.1 True 3406 mRNA 0.46 10 20533111 20558297
XM_039815171.1 False 3327 mRNA 0.46 9 20533111 20558296

Neighbor

gene id symbol gene type direction distance location
mmp16b LOC103369336 coding downstream 77233 20438467 ~ 20455878 (-)
pter pter coding downstream 117177 20409135 ~ 20415934 (-)
LOC120567661 NA coding downstream 181880 20348509 ~ 20351231 (-)
ift22 ift22,LOC102787459 coding downstream 193718 20336698 ~ 20339393 (-)
atp6v0b atp6v0b,vato,LOC102788333 coding downstream 314316 20208710 ~ 20218795 (-)
gata6 gata6 coding upstream 30487 20588784 ~ 20595162 (-)
mib1 mib1 coding upstream 61991 20620288 ~ 20675826 (-)
greb1l NA coding upstream 135070 20693367 ~ 20740029 (-)
thoc1 thoc1 coding upstream 234447 20792744 ~ 20799545 (-)
LOC120569019 aqp1,LOC103358082,LOC101079855,LOC104917699 coding upstream 257352 20815649 ~ 20818164 (-)
G116368 LOC101078271 non-coding downstream 141391 20390357 ~ 20391720 (-)
G116366 NA non-coding downstream 145049 20387498 ~ 20388062 (-)
G116328 NA non-coding downstream 207237 20325649 ~ 20325874 (-)
G116292 LOC107655868,LOC106532782,LOC108241678 non-coding downstream 595698 19924212 ~ 19937413 (-)
G116293 NA non-coding downstream 650702 19879905 ~ 19882409 (-)
LOC120568747 NA non-coding upstream 22223 20580520 ~ 20585677 (-)
G116484 rock1 non-coding upstream 210338 20768635 ~ 20771028 (-)
G116499 NA non-coding upstream 247856 20806153 ~ 20806691 (-)
G116508 NA non-coding upstream 269215 20827512 ~ 20827711 (-)
G116525 NA non-coding upstream 360672 20918969 ~ 20919716 (-)
xcr1b.1 NA other downstream 737352 19793342 ~ 19795759 (-)
G116138 NA other downstream 1067731 19464700 ~ 19465380 (-)
G116084 LOC104943419,LOC103361571,LOC101479291 other downstream 1310385 19221791 ~ 19222726 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other downstream 1597620 18931974 ~ 18935491 (-)
G115941 NA other downstream 1686834 18844905 ~ 18846277 (-)
tmie tmie,LOC102776014 other upstream 426504 20984801 ~ 20995567 (-)
higd1a higd1a other upstream 449751 21008048 ~ 21010576 (-)
G116969 NA other upstream 1703701 22261998 ~ 22268559 (-)
LOC120569135 ttc39c,LOC102790819 other upstream 2787421 23345718 ~ 23361580 (-)
G117259 vps4b other upstream 2872069 23430366 ~ 23430992 (-)

Expression


Co-expression Network