LOC120568008


Basic Information

Item Value
gene id LOC120568008
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2878147 ~ 2880316 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815181.1
CTCGTCCTGGAATGTAGAAAAGCTTGATAACTCCTTCCTTTGTTGTGTGATGACAATGAACACTAAACCCTTGATGAGACAGTCACAGAATACTCACAGTCAGGCAGTCATCACTAagaggtgaaatggcgcagaaaggagttcagctggaccCGGAGACCTTCTCTTGTTCgatctgtctggatctactgaaggatccggtgactactTCCTGTGGACACAACTACTGCATGAACTGCATTAAAAGCCACTGGGATGAAGAGGATCATAagaacatccacagctgtcctcagtGCAGGCAGACgttcacaccgaggcctgtcctgctgaaaaacaacttgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatttCTGCACTGGGAGAAAACTAAAAGCCATCAAGTCCTGTTTGATGTGTCTGATGTCTTACTGTGATCAACACCTCCAGCCTCATTATGATGTGGCTCAgttaaagaaacacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatgaagatgttctgccgtactgatcagcagcttatctgttatctctgcttaatGGAGGAACATAAAGGCCATGACACAGTCTCTGCTGCAGCAGAAAGTAGTGAGAGGCAGAAAAAGCTTGAGGGGAGTCAACAcaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacagcaggcggaggccatcaatcgctctgctgataaagcagtggaggaaAGCGAGAAGATCTTCTCTGAGCTGATCTgtctcctggagaaaagaagctctgatgtggagcagcaggtcagatcccagcagaaaagtgaagtgagtcgagtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaagaaagacgctgagctgaagaagctctcacacacagaggatcacaaccagtttctacacaactacccctcacAATCAGCATCCAGCATCGATATCTGTCCTCTGAGCTACTTTGAGGACATGACAGCGGCTGTatcagaagtcagagataaactacaggacgtTCTGAGAGAGAAGTGGACAAACGTCTCACTGGCAGGAAAGGCTGTAGGACTGGCCGTAAACAGAAGACAGAGCAAACAGGACCCTCATGTGAGAAGGGACCACAAAGATTTGAGATGCTGGAAGGGGCCCACAGAGAATGCGTATGTACAGGGACCAGAAGTTTTTGCTACACCCCTGCTGACTCTAGAGGATTTTTTAGTGTcacaaccagagcccaagaccagagctgacttCTTACAATATTCACGtgaaatcacactggatccaaacacagcacacacacatctgttattatctgaggggaacagaAAAGCAACAAGAATGAGAAAACATCAGGcttattctagtcacccagacagattcactaGATGGcctcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagaggagagggtaTGGAGTAGATATAGCAGTTgcatacaagaatatcagcagagcagggaGGTCGAATGAATGTTTGTTTGGATTCAATGACAAATCATGGCCGTTACATTGGGAAAgaaattgttatttattttgttacaaCAAAGTCAAAACTCCCGTCTCAGGTcctgagtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagcgtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGTTTTAGTCTTGATTATTCTGGAACCACTGCTGAGTTGTGTGAGCTGAAGTAGACGgaagtcatttaagggttaatCTCTGTTTTAACTCTTCAACTTATTTAGTCTTCATGTTTGTTGCTGAGAGCTGATTGTTGTGACATTTCTTCACTGCACAGAGatcagctgtcagtcaaacaTTATGGGATGTCCTTTGGCATCTGGTCATTAGttgttgtgtaaatgtttgagtttcTTTAGGTGACTCCTTCCTGTGTCTGTTTAGCCACGGAGGCTATCACTGCTCATGATGATGTTTGTTG

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle
ko04115 p53 signaling pathway
ko04218 Cellular senescence

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815181.1 True 2170 mRNA 0.46 1 2878147 2880316
Loading

Neighbor

gene id symbol gene type direction distance location
LOC120568010 NA coding downstream 14413 2859574 ~ 2863734 (-)
LOC120568013 NA coding downstream 20524 2854923 ~ 2857623 (-)
LOC120568009 NA coding downstream 25759 2850025 ~ 2852388 (-)
lamc2 NA coding downstream 149601 2703359 ~ 2728546 (-)
smg7 smg7 coding downstream 215382 2625838 ~ 2662765 (-)
LOC120568011 NA coding upstream 277886 3158202 ~ 3181305 (-)
LOC120568004 NA coding upstream 303266 3183582 ~ 3200853 (-)
LOC120568006 NA coding upstream 354052 3234368 ~ 3254369 (-)
LOC120568323 NA coding upstream 791234 3671550 ~ 3706170 (-)
LOC120568526 NA coding upstream 866981 3747297 ~ 3751140 (-)
G111626 LOC104959728 non-coding downstream 30761 2843728 ~ 2847386 (-)
G111591 NA non-coding downstream 50991 2784518 ~ 2827156 (-)
G111620 NA non-coding downstream 76687 2801000 ~ 2801460 (-)
G111590 NA non-coding downstream 88874 2783909 ~ 2789273 (-)
G111615 NA non-coding downstream 105901 2768835 ~ 2772246 (-)
G111632 NA non-coding upstream 15681 2895997 ~ 2896199 (-)
G111638 NA non-coding upstream 52053 2932369 ~ 3025643 (-)
G111642 NA non-coding upstream 59862 2940178 ~ 2952425 (-)
G111645 NA non-coding upstream 66251 2946567 ~ 2948484 (-)
LOC120568014 NA non-coding upstream 87677 2967993 ~ 2975481 (-)
G111573 NA other downstream 300133 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 473054 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1134308 1743300 ~ 1743839 (-)
G111226 NA other downstream 1460188 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1468619 1391808 ~ 1409528 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 17899 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 323971 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 434330 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 565084 3445400 ~ 3456534 (-)
G111942 NA other upstream 624182 3504498 ~ 4036963 (-)

Expression

LOC120568008 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 15.
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LOC120568008 Expression in each Bioproject

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LOC120568008 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 40.
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Co-expression Network