LOC120568010


Basic Information

Item Value
gene id LOC120568010
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 2859574 ~ 2863734 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815183.1
TGCACACTGCTCTCTGATTGCTGATCTCCCTGCTGGTTGGCCTGTGGCTGTCGTTTTGTGTTTAGACTTGTATGTGGTTGGAGGTTGAGGACCTTAGTGGGTGTAACCAACGTGGTGAAATCTGAGAGCTGACAGGCCCCGTTCACTGCAGAAACACATGCTGTTCAGAACGGGCGTTGTCACTGAGAACAGAAATGGCgcagaaaggagttcagctggacAGGGAGaccttctcttgttccatctgtctggatctactgaaggatccggtgtctactccctgtggacacaactactgcatgaactgtattaaaagcAACTGGGATAAAGAGGATCATAagaacatccacagctgtcctcagtGCAGGCAGACgttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctcaagatgtggcctgtgatttCTGCACTGGGAGAAAACTGAAAGCACACAAATCGTGTTTGATGTGTCTTGTCTCTTACTGTGATCAACACCTCCAGCCTCATTATGATGTGGCTCCattaaagaaacacaagctggtggagccctccaagaagctccaggagaacatctgctctcgtcatgatgaggtgatgaagattttctgccgtactgatcagcagcttatctgttatctctgcttaatggaggaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaaaagcTTGAGGGGAGCCGGCAAAACATCCAGCAAAGAATTCAGGACcgagagaaagatgtgaagctcCTTCAACAGCAGGCGGAGGTTATCAATGACTCTgctgataaagcagtggaggacagcgagaAGATCTTCACTGATCTGATCTGTCTCatggagaaaagaagctctgatgtgaagcagcaggtcagagcCCAGCAGCAAAGTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgctgagctgaagaagctctcacgcacagaggatcacaaccagtttctacacaactacccctcactgtcaccactcagccaatctacatccagcatccatatccGTCCTCTGAGCTACTTTGAGGACATGACAGCGGCTGTGTCAGAAGTTagagataaactacaggacgtTCTGAGAGAGAAGTGGACCAACTTCTCACCGACAAGGACTCTAGTGAACGTTTTACTGCCAGAACCCAAGAACAGAGCTGacttcttaaaatattcatgtGAAATtacactggatccaaacacagcaaaCGCACATCTGTTACTGTCTGAGGGGAACAGAAAAGCGACACGAATGAGACAACAGTCGtattctagtcacccagacagattcactgGATGTTttcaggtcctgagtagagagagtctgactggacgttgttactgtgaggtggagaggagaggggaaggAGTACGTGTAGCAGTAgcatacaagaatatcagcagagcaggggggTCGAATGAATGTGGATTTGGACGaaatgacaaatcttgggcATTAGATTGTTACACTCATAGCGGATATACATTTTGGTACAACAATGTCGAAACTCTCATCTCAGGTCCTCggtcctccagagtaggagtgtacctggatcacagtgcaggtattctgtccttctacagagtctctgaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTATGCTGGACTTTATCTTTCTCCTGGAACcactgctgagttgtgtaaactgaaatagacagaagtcatgTAAGGGTTAAACTCAGTTTTAACTTTTCAacttatttaaagttttttttatttttattttttttttaaatatggtatatttataaataaaaaatttaaagcTGATGTTGAGTTTCTTTAGGTGTTCCTTCATGGGTGtaagacacacagacaatccCCAGATCTCCTTTTATCCTCTATACTTTGTTCTCTTTGTAAAGAAATCTATAGTCACATTTGTTTAATTTGCATAATGAATAAGGAAATTATTCATTATTATCTTTTACATATCTGAAAATCAAACCCACTGTGTGGATGAAGTGAATCTGTACATAAATGTTTTTGGTGCTTGAATAAACTAACCTGAATAAAGTATGTTCTTGTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815183.1 True 2232 mRNA 0.44 2 2859574 2863734

Neighbor

gene id symbol gene type direction distance location
LOC120568013 NA coding downstream 1951 2854923 ~ 2857623 (-)
LOC120568009 NA coding downstream 7186 2850025 ~ 2852388 (-)
lamc2 NA coding downstream 131028 2703359 ~ 2728546 (-)
smg7 smg7 coding downstream 196809 2625838 ~ 2662765 (-)
lamc1 lamc1,LOC103398751 coding downstream 258097 2518851 ~ 2601477 (-)
LOC120568007 NA coding upstream 3521 2867255 ~ 2889739 (-)
LOC120568008 NA coding upstream 14413 2878147 ~ 2880316 (-)
LOC120568011 NA coding upstream 294468 3158202 ~ 3181305 (-)
LOC120568004 NA coding upstream 319848 3183582 ~ 3200853 (-)
LOC120568006 NA coding upstream 370634 3234368 ~ 3254369 (-)
G111626 LOC104959728 non-coding downstream 12188 2843728 ~ 2847386 (-)
G111591 NA non-coding downstream 32418 2784518 ~ 2827156 (-)
G111620 NA non-coding downstream 58114 2801000 ~ 2801460 (-)
G111590 NA non-coding downstream 70301 2783909 ~ 2789273 (-)
G111615 NA non-coding downstream 87328 2768835 ~ 2772246 (-)
G111632 NA non-coding upstream 32263 2895997 ~ 2896199 (-)
G111638 NA non-coding upstream 68635 2932369 ~ 3025643 (-)
G111642 NA non-coding upstream 76444 2940178 ~ 2952425 (-)
G111645 NA non-coding upstream 82833 2946567 ~ 2948484 (-)
LOC120568014 NA non-coding upstream 104259 2967993 ~ 2975481 (-)
G111573 NA other downstream 281560 2573304 ~ 2578014 (-)
LOC120567903 NA other downstream 454481 2341462 ~ 2405093 (-)
LOC120567890 NA other downstream 1115735 1743300 ~ 1743839 (-)
G111226 NA other downstream 1441615 1412956 ~ 1417959 (-)
LOC120568022 NA other downstream 1450046 1391808 ~ 1409528 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 34481 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 340553 3204287 ~ 3229147 (-)
LOC120568520 LOC101465856,LOC102211951,LOC102296991,LOC100703857,LOC103352978,LOC102799200 other upstream 450912 3314646 ~ 3371775 (-)
LOC120569104 NA other upstream 581666 3445400 ~ 3456534 (-)
G111942 NA other upstream 640764 3504498 ~ 4036963 (-)

Expression


Co-expression Network