LOC120568025 (LOC103365692,LOC101173737)



Basic Information


Item Value
gene id LOC120568025
gene name LOC103365692,LOC101173737
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 1415156 ~ 1428314 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039815198.1
TGGCCGCCCTGGTTGCCTTCAGCAGGAAGAATCGCCACAGTTTATTTACTGTCCCTGTCATCAGCATCAGAAATAGGTTTTCTTATTAAATGTGGCAGAAATCAACCCGTAAATCAGCGCAGTCCGTCTTCAGAGTGTCACGTGAGACTGATAAAGGGGAAGCTAACCGGACAGctaaccgctaacgttagccggTTAGCCCGCTGCAAGGTGCCGGCAGTGCCCGTCTGAGTGAATCGTTGCATGGGGGAGTGACTGTCGGCCATGATGAGCGCGGAGCCGGACGCCCTGGCCGTGGTCAACCAGCTGCGGGACCTGGCCGCTGACCCCATGAACCGCCGGGCCATCGTACAGGACCAGGGCTGCCTGCCGGGACTCATCCTGTTCCTGGACAACCCCAACCCTCAGGTCGTCTACTCCGCCCTGCTGGCGATCCGGTACCTGGCAGAATGCCGAGCCAACCGGGAGAAGCTGAAGGGGGAGCTGGGGATGATGCTGAGCCTGCAGAACGTCATGCAGAAGTCGACGACTCCCGGGGAGACGAAGCTGCTGGCGTCGGAGATCTACGAGCTGCTGCAGGCGTTCGGCAGCGACGGCGCCGAGCAGGCCGAGACGTCCGTCAGCAGCCGGCGGAAAGCCCAGTTCTTCCTGGGCTCCAGCAACAAGAGGGCCAAGACCGTCATCCTGCACATCCAGGGGCTGGACGACTCGAGCCGGAGGAGTCTGTGTGAAGACGCCCTGCTGAAGATCCGAGGAGTGATCAGCTTCACCTTCCAGATGACCGTCAAGAGATGCATCGTCCGAATCCGATCGGACCTGAAGGCCGAGGCTCTGGCGTCTGCGATCGCGTCCACCAACGTGATGACGGCGCAGCAGGTGGTGAAAGGAGAGAACGGAGACGAGGTTTTGATCCCGCTGGCGACGGACGGTTCGGTGACGGTGGAGCAGAACGCGGCGCTGCCGGACTACCTGCCGGAGGAAGAGAGTCCGTCTCTGGAGCCCGACAAGGCGGTGACCCGCGTGGGATCGGGCCAGGACGGGAGCAGCTGGCTGGGCACCGCCACCAACTTCCTGTCCCGCTCTTTTTACTGGTGACTCGCTTAAAAACCCCTAACCCGCCTCGTCTCAGAACCTAAACCTACCCGGCTGCCAAATCTCACCGCTGTCTGTTACACACACTCAACCGTGGAGGTACGAGACAAGAACTCTTCTGTTCTTACCACTGCACTTTTGAATATGTTCCCTTAATGGTACAGTATTGTTTTTTAAGAGGCCAGAACTGGACCTTTTGACTAATTTGAGGGTATTAAATCAAAGAGAAGGGGACACGGTTGCCTCTCAAAAGGAAACCTCTCCTGCGACAAACATTTGTCCCATTTAGGAACTCAACGTTACTTCTGGAGACGAGAAACATGAGACCATCTTCTTGGAACAGTGAGAGCGAAAGCAGGATGATGGAAACACGCCACTGTTAACGCCATTGTAAACCGGTCCGTCAAGACACCATGTGAGTTGCGCACGTGCCGAACGGCCGCCGTCTTTGACAGCTAGCTACGGCAACGCCACAAAAGACAAACCACATGGTTGCCGAGCGATGCGATACGCGAAAACGGTCCATAAATACTCACGACTAACATCGTGTCTCAACGGGGTCTCTCTGTTCCAAACCAAGTTGTCTTAACGGGCTGGAAGtgaactgctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgaactgaacAGGACGTCCCGTCTCGTCCTCTTACCTTTTTATTGTTCTTATTTGACTTTTCTTCCACAGTTTGACGTGCCTTCAGTTCCTCTGATCCACTTTCagctttatattatttattgttatttcaaTCATAGGCTCTCAACACTCTTCTGTTGGAGGTTTCCAAATATTATCATGCTTCATTACACTT

Function


NR:

description
PREDICTED: armadillo repeat-containing protein 1-like

GO:

id name namespace
GO:0030001 metal ion transport biological_process
GO:0046872 metal ion binding molecular_function

KEGG:

id description
K17306 ARMC1; armadillo repeat-containing protein 1

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039815198.1 True 2012 mRNA 0.55 7 1415156 1428314

Neighbor


gene id symbol gene type direction distance location
sft2d3 sft2d3 coding downstream 209615 1203988 ~ 1205541 (-)
LOC120568681 LOC102798692,LOC102306166,LOC101470701,LOC102196346 coding downstream 278605 1120371 ~ 1136551 (-)
LOC120567934 NA coding downstream 361496 1050897 ~ 1053660 (-)
LOC120567797 NA coding downstream 513960 895507 ~ 901196 (-)
ccr9a NA coding downstream 566511 843808 ~ 848645 (-)
LOC120567872 NA coding upstream 4921 1433235 ~ 1435275 (-)
LOC120568497 NA coding upstream 328307 1756621 ~ 1764145 (-)
lamc1 lamc1,LOC103398751 coding upstream 1090537 2518851 ~ 2601477 (-)
smg7 smg7 coding upstream 1197524 2625838 ~ 2662765 (-)
lamc2 NA coding upstream 1275045 2703359 ~ 2728546 (-)
LOC120568021 NA non-coding downstream 41531 1372855 ~ 1373625 (-)
G111222 NA non-coding downstream 66854 1346507 ~ 1348302 (-)
G111208 NA non-coding downstream 92502 1265661 ~ 1322654 (-)
G111213 NA non-coding downstream 121018 1289992 ~ 1294138 (-)
G111201 NA non-coding downstream 183741 1231017 ~ 1231415 (-)
G111235 NA non-coding upstream 42785 1471099 ~ 1508883 (-)
LOC120567884 NA non-coding upstream 69448 1497762 ~ 1497967 (-)
LOC120567885 NA non-coding upstream 96360 1524674 ~ 1526105 (-)
G111245 NA non-coding upstream 121467 1549781 ~ 1664043 (-)
G111254 NA non-coding upstream 218859 1647173 ~ 1660408 (-)
LOC120568022 NA other downstream 5628 1391808 ~ 1409528 (-)
dhx9 dhx9 other downstream 24618 1353022 ~ 1390538 (-)
mfn1a LOC102798404,LOC103374728,LOC101171942 other downstream 100311 1296833 ~ 1314845 (-)
LOC120568485 NA other downstream 300974 1100064 ~ 1114182 (-)
G111133 NA other downstream 314486 1008233 ~ 1100670 (-)
LOC120567890 NA other upstream 314986 1743300 ~ 1743839 (-)
LOC120567903 NA other upstream 913148 2341462 ~ 2405093 (-)
G111573 NA other upstream 1144990 2573304 ~ 2578014 (-)
LOC120568519 dlg1,LOC106568684,LOC105023059 other upstream 1469901 2898215 ~ 3142454 (-)
LOC120568005 NA other upstream 1775973 3204287 ~ 3229147 (-)

Expression



Co-expression Network