c8a


Basic Information

Item Value
gene id c8a
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14049498 ~ 14055522 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815214.1
CATTCACTGCGGTTGGTCAACGCTGCAGTGGTAGAAGTCACCACACAACGGCTGTTTTGTCATGGCATTTTGATCTTAAGGACTAGCTACTCATTTTCAGTATGGAgacatttattcatttactcCTGACTTTATGCACACTGCATCTGTCTGTCAATTTTAGCCCAGTTGTGAATGCATCCAGGAGGTCATGGACAACTGCTGATACCAGTTGGGCTGGGCTGAGGAGGGCCAGAGCTGTAAACAGCCCGATACCCATCAACTGTAATGTGGGGAGCTGGTCATCTTGGACTCCTTGTAACTCTTGCACAGACAGAAAGGTCCGTTTCCGATACATTGAGAAGCCCTCACAGTTTGGTGGCACAGAGTGCACTGGGACACTGTGGGATAAGCAGGCATGTCCAACAGTAACAACACCGTGTCTGGTGACAGATTACTGTGGAGAGAGCTTTACCTGCCGTGAAACAGGTCGCTGCATCAGCGAGTCCCTTCGCTGCAATGGAGAGTCAGACTGTGATGATTTCTCTGATGAAGAGGGCTGTGAAGACGTCACCCGGAGAGATGACAAGTGTTCCACCATACTCCCGATCCCTGGTGCTAAACGTGGCACTCAGGGCTACAACGTCTTGACTGGAGACTTTGTGGATCACGTACTTGACCCGAGTTACTTTGGAGGAGCGTGTGAATATGTCTATAATGGTGAATGGAGGAAATTTATCTATGACGCATTCTGCGAAAACCTGCACTATAATGAAGATGAGAAGAACTACAGGAAACCGTACAACTACCACACCTACCGCTTTGTGGCTCAAGCTACGTCTGAGGGCTCTCACGAATACTATGAAGATACGGTGAGCCTGCTGAATGCGAGGAAAACCATGAGTTCTTCCAGTGCCGGAGTCACAGTTGGGATCCATGTAGTGGAAGTGGGACTGGGTGGAAGTGAGGAATCTGAGTTTTTTGAGAACATAACAAAGCATAAAAGCCAGGACCTCGGGTTCATTAGGCTTTGGTCCAAAGTGGAGACAGCCCACTTCAAAATGAGAAGTAATAAGCTGATGCTTCATGAAGATTTCTACATTTCACTCATGGAGCTCCCTGAGCAGTACGACTTTGGGAGTTACTCCCACTTCTTCCGCACATTTGGCACCCACTATGTCACAGAGGGAATTATGGGAGGAACCCTTGAATATGTAGTGGTTGTCAACAAAACATCTATGGCGAAATCAAATATTAACAGTGAAGAAGCTGGCAGCTGCTTTGGTGCCTCTTTGGGTTTAACCCATTACTTCACTGAAACAGGAACTAAATCAGCAACTCTCAAAGTTAGTGAGAAGGATTGCAAAAAAACAGGAACGTATGATAGAGgcgCGAGCTCTAGTTCATCTGTGGTTGAGGACATTGTTACTCTAGTGAAGGGGGGagtcacacacagcagcagtggCCTGTTGGCCAGGAACCCTGACACCTACAAAAACTGGGGAGCGAGCCTCAAATACAACCCAGCACTCATCGAATATGAGACAATGCCAATTTATGAGCTAGTGCGCCTCAGCACAGCCGCTGACCATGTAGGTGCGAGACTGGCCAACTTGGAGAGAGGCTGGGATGAGTATCAGCAGCAGTTTGACTCCTGCCGCTGCGCCCCCTGCAGGCACAACGGCATCCCTGTCCTCACGGGTACCTCCTGTACGTGCATCTGTAAGTCAGGCTTCCATGGACAGGCCTGTGAAGAGACTCTCAGAAGAGATACCAAGACAGATGGGTCGTGGTCGTGCTGGGGGGCCTGGTCTTCCTGTGGATCGGAGAGGAAGACTCGGACAAGAACCTGTGATAATCCTGCACCTGATGGGGGCGGAGCAACCTGCCTGGGCTCCTCCTTTCAGACTCGGCGCTGTTAAAGTCGCTCCCGTTCCAGGGTGAAAATGTTGTTGAGTGCTAATTAAGCataatcaaaatgttttttaatgaataaaaaGCTGCTCCTCCACAATCCCTTT

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006955 immune response biological_process
GO:0005579 membrane attack complex cellular_component

KEGG:

id description
K03997 C8A; complement component 8 subunit alpha

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815214.1 True 2000 mRNA 0.49 11 14049498 14055522

Neighbor

gene id symbol gene type direction distance location
rgs11 rgs11 coding upstream 55900 13985299 ~ 13993598 (+)
LOC120567849 LOC104930846,LOC103354334,LOC100696120 coding upstream 348615 13688421 ~ 13700883 (+)
LOC120567846 LOC103354336,LOC103398841,LOC101469236,LOC104930847,LOC100702297 coding upstream 399702 13645229 ~ 13649796 (+)
yme1l1b LOC103354339,LOC104952441 coding upstream 409334 13630258 ~ 13640164 (+)
LOC120568344 LOC103354340 coding upstream 419574 13620560 ~ 13629924 (+)
LOC120567821 LOC101487896,LOC103365967 coding downstream 169479 14225001 ~ 14227666 (+)
LOC120567998 prdx6,LOC101487422,LOC103365780 coding downstream 179605 14235127 ~ 14238123 (+)
LOC120568001 jun,LOC104967900 coding downstream 202037 14257559 ~ 14259688 (+)
mgst3a mgst3 coding downstream 263153 14318675 ~ 14321387 (+)
LOC120568146 LOC103364811,LOC100690866 coding downstream 275069 14330591 ~ 14340646 (+)
G114371 NA non-coding upstream 9262 14038682 ~ 14040236 (+)
G114350 NA non-coding upstream 78217 13971065 ~ 13971281 (+)
LOC120567951 NA non-coding upstream 208553 13743275 ~ 13840945 (+)
G114301 NA non-coding upstream 316535 13732682 ~ 13732963 (+)
G114271 NA non-coding upstream 390117 13659042 ~ 13659381 (+)
G114376 NA non-coding downstream 171 14055693 ~ 14056452 (+)
G114398 NA non-coding downstream 118470 14173992 ~ 14174585 (+)
G114406 NA non-coding downstream 136441 14191963 ~ 14234212 (+)
G114428 NA non-coding downstream 258080 14313602 ~ 14314015 (+)
G114429 NA non-coding downstream 258781 14314303 ~ 14314633 (+)
si:ch73-71c20.5 NA other upstream 863134 13183284 ~ 13186364 (+)
ndufb3 ndufb3 other upstream 924035 13123030 ~ 13125463 (+)
rpl37a rpl37a,RPL37A other upstream 932142 13114596 ~ 13117356 (+)
col6a1 col6a1 other upstream 974904 13010575 ~ 13074594 (+)
LOC120569010 NA other upstream 1089149 12952548 ~ 12960349 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 231628 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 930255 14985777 ~ 14993083 (+)
ro60 trove2 other downstream 958221 15013743 ~ 15026208 (+)
G114789 NA other downstream 1096274 15151796 ~ 15157199 (+)
LOC120568540 LOC108238308,LOC100706341,LOC103359463,LOC106530177,LOC102798013,LOC101474556,LOC102303803 other downstream 1283035 15338557 ~ 15368780 (+)

Expression


Co-expression Network