LOC120568033 (LOC103366454,LOC104932767,LOC101066162,LOC108238297)


Basic Information

Item Value
gene id LOC120568033
gene name LOC103366454,LOC104932767,LOC101066162,LOC108238297
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 14023028 ~ 14038301 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815216.1
AAGAACAGGAGTAATATAGTAAGGATGGTTAGAAGAAAGAGTGAGAGCTGTGATTGTTAGAAGACAACCAGCTAATGGTTACATTTTGAAGGAGCGTATTTTCTGAATAGCAGACTAACAGTTTAGACTTGCATGACGACTCCTTAGGATCCAAGTAGAATCGCTAGGCAATTGTAGAGAGTAAAAAATAAAGGCACTGCGACAGCTTGTAACAAGATTTagattccctttttattttttttttccctttatttattcataacaCGTTTTAAATGCAACGCTGTTTGATATATGAGAAAACGATGGCAGCCGAGACGAGGAACGGCGGGAGTTCACTGAACAACAATAACTGCAAAGACCACAGCAGGAGAAAGTTACTGGTCGGAGTGGACCTCTTCTGCTTATTTTTAGCCGGCCTGCCTTTCTTGGTCATTGAGACCAGCGCTGTTCAGCCTTACCGTAGAGGGTTTTACTGCGATGATGAGTCCATCAAGTACCCGGCCAAAAACGGAGACACCATTAGCGACGGTGTGCTTAGTGCGGCTGGCATTCTTATCACCATCCTCTCTATCATCGTCGGGGAGAGCTACAGGATCTACTTTCTAAACGAGGGATCCAAGTCTTTTGTAGGGAACCCCTACATATCGGCTCTCTACAAGCAGGTGGGCGTGTTCATCTTCGGCTGCGCCATCAGCCAGTCTTTCACTGACATTGCCAAAGTGTCAGTGGGCCGAATGCGCCCTCACTTCCTCGATGTGTGCAAACTTGACTTCTCCACTATCAACTGCTCCCTGGGCTACATCACTGTCTACCAGTGTCAGGGGCCAGAGAGCAAAGTTCAGGAGGCCAGGAAGTCTTTTTTCTCTGGACATGCATCATTCTCCATGTACACCATGCTTTACCTGGTGttttacctGCAGTCTCGTTTCAATTGGCATGGAGCTCGCCTGCTGCGCCCTCTGACCCAGTTCACCCTCATCATGATGTCTTTCTACACCGGCCTGTCCCGTGTCTCTGATCACAAGCACCACCCAACTGATGTCCTGGCAGGTTTTGTGCAGGGAGCCCTGGTGGCCTACTGCATAGTATTCTTTGTGTCTGATTTGTTCAAACCCAAAGGTAGACGCTCTACCCTTTCACCAACCCCAGTGAAGAAAGATCTAGTTCCTCCAGCGGACAACAGAGAGCGGAGTAACCATCTCATAATGGCATAGAGAAGGCTTCAATCTGACTGTACATAACCCTGACcggtgacttttttttttaagtcactgCTACAGCCACTGGTCAATACTGGATACAAATAAACTCCCAACAATCTGGATAATGGAGACAAACTATGGAATCTTGAGCGTCTCATAGGATGAGAGAAAGAGGTCTATGGAAAACTGTCAACCAAGTTTTGCTTTCTCAATGGAAATGTTCATCTTTTTCCTCCAGTCTCACCAGCCATTTTAATgtggaaaagagagaggaatggGGATATTTGTACCTCTTCTGTTATGAAGATTATTTGAGATTCTCCTCTGTCAAGGCCTTTCCATGGACACAAGTCTGAAATGAAACAAAACTGAGAAATGGCAGCTGTAATCAAAGCTGTGTGTGGCTTTTGTGCCTTCTCCCCTCAGCTGCATTCAGCATGGGAGCTACTATTATATTCCtgccactcactcactcactcactgtgTGACTAATACAAACAAatcatgacaaaaaaacaaattccttgaTTTCATGAAggatgttgtttttgtttggttttattACAGACATAAGCATTGTATGTGTGATTTATAGCACTATTTTAGCGAAACTAAGTCCTGTGTGTATCCACTTGAATTACCTAAAGTGAAGCTTTTGGAAAGCTTTGTAAGACTATAATGCCGTGTTCCTTAGAAGGTGCACATAAGTTACACTAGGTGGAAAGTACAGTGAGAACGTATTTGTTGGATGTGGGCCTCTTTCTGCTGGCTAGGACGAGCCCCCACTGAGCCATTTAATgaaatgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctttctGTGAGCGTACCAATGTGTCTTAATGTCATGTCTATATATTTCAGTGTTTATAGCCTACAAGTGTGCCTCTCTTCAGCCAGAGAAGTGGCACCTGCTCCAACAGACACGTGTAACTCGAGACGGGAACACTGTGGGGGGGGAAAGCATCTAATGTTACCGTTACTAATCGTAGTGATGATTCACATCACTGAGAAATCCTGTGATACACTGTATCCTACACaggcatacagtatatacatatattcaaAATAAAGACAGGGACGTCTAGAACATTGGTTACTTAAAGTAGCCTTTCAGTATCAAAGCACAATTAAGcaatacagtttaaaaaaaattatatttatggCACATTGTAACTGCGTATTATCTCAGTCTTGTAATACAATAGGGCAGGCAATGAGGCTCTGCATTATTAAAGACGAAAATCATTACATTGAATTTTAAAAGTAATAATGATGCTAATATGTTTGCTTGACATTGATGTTATTAACTTTTTAGCAAAAAGAGTAATGACACTTAAAACCACTGACTGAAAGCATCTTCCTCAGCTTTAAGTTACTGAGACAAACTTTGATCTGATGCTTATAAGAAACTATAGTTCTTTCTTCATACATGGCTTGAAAATCTATATACAGCATCAGAAGATTCTGCATGCTACCATACATTGTACAATAGTGTATCAtttgtatatatacattatatctTTTGAAGAAACGCCCACTATGACTTGTGTGTCGAGACCTGTGTAAATGTAAAACATGCTGCTTTAAAGAGGCAAAGCTTGGCAGATGGCATCAAGTAACGTTGACAACTTGTGAAAATTAAGTTTTATGAAAATCAAAGCTCTCAAGGCAGACGGCTTCAGTccatgtttgtttaaaaaaaaatgcctttcAATATTTTTGTAATGTGAAATTTTGTACAATGAAACTGTAAGATGTATCAAAGATAAATTgtctttaataaaacaaaaggtGAAGAGCAGCA
>XM_039815217.1
TAAGAACAGGAGTAATATAGTAAGGATGGTTAGAAGAAAGAGTGAGAGCTGTGATTGTTAGAAGACAACCAGCTAATGGTTACATTTTGAAGGAGCGTATTTTCTGAATAGCAGACTAACAGTTTAGACTTGCATGACGACTCCTTAGGATCCAAGTAGAATCGCTAGGCAATTGTAGAGAGTAAAAAATAAAGGCACTGCGACAGCTTGTAACAAGATTTagattccctttttattttttttttccctttatttattcataacaCGTTTTAAATGCAACGCTGTTTGATATATGAGAAAACGATGGCAGCCGAGACGAGGAACGGCGGGAGTTCACTGAACAACAATAACTGCAAAGACCACAGCAGGAGAAAGTTACTGGTCGGAGTGGACCTCTTCTGCTTATTTTTAGTGTTGCTTGTTGCCGTGTTTTTGCACAAATCTCCCTTCCCGCCTTACCAGAGAGGATTCTTCTGCAATGACAACAGCATCAGGCTGACCTATAAAGGCAGCACGGTATCCACCACCGTGCTCTCAGCCGTGGGCGTCACTGTGCCCGTGGTCTCAATCATCGTCGGGGAGAGCTACAGGATCTACTTTCTAAACGAGGGATCCAAGTCTTTTGTAGGGAACCCCTACATATCGGCTCTCTACAAGCAGGTGGGCGTGTTCATCTTCGGCTGCGCCATCAGCCAGTCTTTCACTGACATTGCCAAAGTGTCAGTGGGCCGAATGCGCCCTCACTTCCTCGATGTGTGCAAACTTGACTTCTCCACTATCAACTGCTCCCTGGGCTACATCACTGTCTACCAGTGTCAGGGGCCAGAGAGCAAAGTTCAGGAGGCCAGGAAGTCTTTTTTCTCTGGACATGCATCATTCTCCATGTACACCATGCTTTACCTGGTGttttacctGCAGTCTCGTTTCAATTGGCATGGAGCTCGCCTGCTGCGCCCTCTGACCCAGTTCACCCTCATCATGATGTCTTTCTACACCGGCCTGTCCCGTGTCTCTGATCACAAGCACCACCCAACTGATGTCCTGGCAGGTTTTGTGCAGGGAGCCCTGGTGGCCTACTGCATAGTATTCTTTGTGTCTGATTTGTTCAAACCCAAAGGTAGACGCTCTACCCTTTCACCAACCCCAGTGAAGAAAGATCTAGTTCCTCCAGCGGACAACAGAGAGCGGAGTAACCATCTCATAATGGCATAGAGAAGGCTTCAATCTGACTGTACATAACCCTGACcggtgacttttttttttaagtcactgCTACAGCCACTGGTCAATACTGGATACAAATAAACTCCCAACAATCTGGATAATGGAGACAAACTATGGAATCTTGAGCGTCTCATAGGATGAGAGAAAGAGGTCTATGGAAAACTGTCAACCAAGTTTTGCTTTCTCAATGGAAATGTTCATCTTTTTCCTCCAGTCTCACCAGCCATTTTAATgtggaaaagagagaggaatggGGATATTTGTACCTCTTCTGTTATGAAGATTATTTGAGATTCTCCTCTGTCAAGGCCTTTCCATGGACACAAGTCTGAAATGAAACAAAACTGAGAAATGGCAGCTGTAATCAAAGCTGTGTGTGGCTTTTGTGCCTTCTCCCCTCAGCTGCATTCAGCATGGGAGCTACTATTATATTCCtgccactcactcactcactcactgtgTGACTAATACAAACAAatcatgacaaaaaaacaaattccttgaTTTCATGAAggatgttgtttttgtttggttttattACAGACATAAGCATTGTATGTGTGATTTATAGCACTATTTTAGCGAAACTAAGTCCTGTGTGTATCCACTTGAATTACCTAAAGTGAAGCTTTTGGAAAGCTTTGTAAGACTATAATGCCGTGTTCCTTAGAAGGTGCACATAAGTTACACTAGGTGGAAAGTACAGTGAGAACGTATTTGTTGGATGTGGGCCTCTTTCTGCTGGCTAGGACGAGCCCCCACTGAGCCATTTAATgaaatgactgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcctttctGTGAGCGTACCAATGTGTCTTAATGTCATGTCTATATATTTCAGTGTTTATAGCCTACAAGTGTGCCTCTCTTCAGCCAGAGAAGTGGCACCTGCTCCAACAGACACGTGTAACTCGAGACGGGAACACTGTGGGGGGGGAAAGCATCTAATGTTACCGTTACTAATCGTAGTGATGATTCACATCACTGAGAAATCCTGTGATACACTGTATCCTACACaggcatacagtatatacatatattcaaAATAAAGACAGGGACGTCTAGAACATTGGTTACTTAAAGTAGCCTTTCAGTATCAAAGCACAATTAAGcaatacagtttaaaaaaaattatatttatggCACATTGTAACTGCGTATTATCTCAGTCTTGTAATACAATAGGGCAGGCAATGAGGCTCTGCATTATTAAAGACGAAAATCATTACATTGAATTTTAAAAGTAATAATGATGCTAATATGTTTGCTTGACATTGATGTTATTAACTTTTTAGCAAAAAGAGTAATGACACTTAAAACCACTGACTGAAAGCATCTTCCTCAGCTTTAAGTTACTGAGACAAACTTTGATCTGATGCTTATAAGAAACTATAGTTCTTTCTTCATACATGGCTTGAAAATCTATATACAGCATCAGAAGATTCTGCATGCTACCATACATTGTACAATAGTGTATCAtttgtatatatacattatatctTTTGAAGAAACGCCCACTATGACTTGTGTGTCGAGACCTGTGTAAATGTAAAACATGCTGCTTTAAAGAGGCAAAGCTTGGCAGATGGCATCAAGTAACGTTGACAACTTGTGAAAATTAAGTTTTATGAAAATCAAAGCTCTCAAGGCAGACGGCTTCAGTccatgtttgtttaaaaaaaaatgcctttcAATATTTTTGTAATGTGAAATTTTGTACAATGAAACTGTAAGATGTATCAAAGATAAATTgtctttaataaaacaaaaggtGAAGAGCAGCA

Function

NR:

description
PREDICTED: lipid phosphate phosphohydrolase 3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815216.1 True 3144 mRNA 0.42 6 14023028 14038300
XM_039815217.1 False 3142 mRNA 0.42 6 14023028 14038301

Neighbor

gene id symbol gene type direction distance location
LOC120568034 NA coding downstream 11786 14007742 ~ 14011242 (-)
pgap6 tmem8a coding downstream 16820 13996391 ~ 14006208 (-)
c11h7orf26 LOC103366860,LOC102212268,LOC102304778,LOC102798014,LOC100695326 coding downstream 38439 13978250 ~ 13984589 (-)
tnk2b tnk2 coding downstream 107673 13888299 ~ 13915355 (-)
LOC120567950 LOC103354333,LOC102291624,LOC100702032,LOC107083612,LOC107384444 coding downstream 200264 13774982 ~ 13822764 (-)
si:ch211-188c16.1 NA coding upstream 401 14038702 ~ 14049140 (-)
LOC120568588 c8b,LOC102794687,LOC102209383 coding upstream 18199 14056500 ~ 14112121 (-)
LOC120567994 NA coding upstream 133845 14172146 ~ 14190109 (-)
dnm3b LOC104927414,LOC102288810,LOC102208633,LOC103366040,LOC101463593 coding upstream 153662 14191963 ~ 14215454 (-)
LOC120567997 LOC104927432,LOC101487132,LOC102794113,LOC102204900,LOC100692642,LOC102311096,LOC103365877 coding upstream 192135 14230436 ~ 14233700 (-)
LOC120567953 NA non-coding downstream 74913 13942055 ~ 13948115 (-)
G114257 NA non-coding downstream 394361 13625776 ~ 13628667 (-)
G114256 LOC102077222,LOC102776852 non-coding downstream 397549 13622903 ~ 13625479 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding downstream 458225 13556604 ~ 13564803 (-)
LOC120568710 NA non-coding downstream 473562 13533138 ~ 13549466 (-)
G114456 c8a non-coding upstream 11193 14049494 ~ 14055523 (-)
LOC120568036 NA non-coding upstream 86402 14124703 ~ 14171474 (-)
G114518 NA non-coding upstream 281042 14319343 ~ 14320763 (-)
G114530 NA non-coding upstream 380550 14418851 ~ 14466248 (-)
G114538 LOC104949927,LOC103364340 non-coding upstream 402580 14440881 ~ 14447933 (-)
tfr1a NA other downstream 54217 13949871 ~ 13968811 (-)
dis3l2 dis3l2 other downstream 540803 13469531 ~ 13482225 (-)
G114152 NA other downstream 934465 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 1047700 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 1254403 12760748 ~ 12768625 (-)
LOC120568687 NA other upstream 575312 14613613 ~ 14618224 (-)
G114680 NA other upstream 757617 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1251781 15290082 ~ 15304610 (-)
G115164 btf3l4 other upstream 2105859 16144160 ~ 16148121 (-)
cc2d1b cc2d1b other upstream 2144353 16182654 ~ 16201698 (-)

Expression


Co-expression Network