LOC120568040


Basic Information

Item Value
gene id LOC120568040
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12609157 ~ 12611158 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815224.1
GTTTTCTTGATTAATGTCTCCCAGTCACGAGGAGTAAAAGCACCCTAAGTGTCAGCAGCAGGCATCAGTCATGATGGCTTTCTTTTGGCAAATTGCACTGCTTTTGAGCTTGTCAGCTGCCATTTCTGTCTATGCAGACATGAAACTGGACTGCATGCTAGATTTTGTGAGGCTGGTGTGGACAGAGAGCAGATCCCAGGCTGATCTATCTCTCTTTCGTCTGGGTAACTGTTATCCCACCAGCTTTTCAGCCAGGGAGGCCGTTTTCAATGTGGATATCAATGATTGTAACTTCAGGAGAATGGTTACTGGGGATCAGCTGATGTACACCAATGACCTGATCTACATTTCCTCTCCTGATTCTCGCTTTCTGGCCTTTACTCACCCAGTTGTCTGTGCTTTTCAGAGGCCCATAGACTGGTATCCTCCGATTTATGAACCAGTGTTTAATACCTTCGGTCTAGGCGATCTTGTGTTCCACGTAGGACTCATGAACGATGACTTCTCAGGCCCTGCTGAATCTACTACCTTTCCTCTGGGCTCAATGATCCCCATCATGGCTAGTGTGGCGCAGGAGACCCATCAGCCCATGCTGCTGCTTCTTGAGGAATGCGTAGCAGCTTACACATCGGCTCTGCAGCCTGAAAGCAGTATATATCCGATAATCACCAATAAGGGATGTCTCACGGACAGCATGGTATCACGGTCGAAGTTCGAACCGAGGCAAAAATCCTCTGAGATCCGCCTATCCCTTCAAGCCTTTAGGTTTGCTCCCGGAGAAAAGGTGTTCATCCACTGCAATCTTGTAGCTTGGTATCCCAATGGTCTTGATGACACAAAGAAGGCCTGCTACTATGTCAAAGAGCATGGTTGGCAGCTGCTGGACAACTCTGCATTAAGCCATATTTGTGACTGCTGTGAATCCAGCTGCAAGTCCAGGAGGACAAGGAGTATAGCATCAGgAAAGCATGGAATATTAGAAAAAGCAGTCCTTGGGCCACTTATCATTACTGATGTGAATTCCTGAAGTATCTGAGGAATGGCTCCAGAGTGGTTCCTACAATCTGACttggattttatttcagtgTGCATTTCAGATTGTAATGTGGCCATTAAAGATGTAACCAAATTTTA
>XM_039815225.1
GTTTTCTTGATTAATGTCTCCCAGTCACGAGGAGTAAAAGCACCCTAAGTGTCAGCAGCAGGCATCAGTCATGATGGCTTTCTTTTGGCAAATTGCACTGCTTTTGAGCTTGTCAGCTGCCATTTCTGTCTATGCAGACATGAAACTGGACTGCATGCTAGATTTTGTGAGGCTGGTGTGGACAGAGAGCAGATCCCAGGCTGATCTATCTCTCTTTCGTCTGGGTAACTGTTATCCCACCAGCTTTTCAGCCAGGGAGGCCGTTTTCAATGTGGATATCAATGATTGTAACTTCAGGAGAATGGTTACTGGGGATCAGCTGATGTACACCAATGACCTGATCTACATTTCCTCTCCTGATTCTCGCTTTCTGGCCTTTACTCACCCAGTTGTCTGTGCTTTTCAGAGGCCCATAGACTGGTATCCTCCGATTTATGAACCAGTGTTTAATACCTTCGGTCTAGGCGATCTTGTGTTCCACGTAGGACTCATGAACGATGACTTCTCAGGCCCTGCTGAATCTACTACCTTTCCTCTGGGCTCAATGATCCCCATCATGGCTAGTGTGGCGCAGGAGACCCATCAGCCCATGCTGCTGCTTCTTGAGGAATGCGTAGCAGCTTACACATCGGCTCTGCAGCCTGAAAGCAGTATATATCCGATAATCACCAATAAGGGATGTCTCACGGACAGCATGGTATCACGGTCGAAGTTCGAACCGAGGCAAAAATCCTCTGAGATCCGCCTATCCCTTCAAGCCTTTAGGTTTGCTCCCGGAGAAAAGGTGTTCATCCACTGCAATCTTGTAGCTTGGTATCCCAATGGTCTTGATGACACAAAGAAGGCCTGCTACTATGTCAAAGAGCATGGGTAAATTTGGCAGCTGCTGGACAACTCTGCATTAAGCCATATTTGTGACTGCTGTGAATCCAGCTGCAAGTCCAGGAGGACAAGGAGTATAGCATCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815224.1 True 1134 mRNA 0.46 10 12609157 12611158
XM_039815225.1 False 968 mRNA 0.48 8 12609157 12610840

Neighbor

gene id symbol gene type direction distance location
zp3f.2 NA coding upstream 1013 12605394 ~ 12608144 (+)
slc7a8b slc7a8 coding upstream 27945 12565994 ~ 12581212 (+)
prmt5 prmt5 coding upstream 46179 12555686 ~ 12562978 (+)
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding upstream 519596 12074976 ~ 12089561 (+)
slc6a9 slc6a9,LOC102776426 coding upstream 546914 11981139 ~ 12062243 (+)
LOC120568617 rnf212b coding downstream 984 12612142 ~ 12616610 (+)
si:ch211-14a17.10 NA coding downstream 21327 12632485 ~ 12663198 (+)
acin1a acin1 coding downstream 54074 12665232 ~ 12684696 (+)
trim110 cbln3,LOC102310989,LOC102795120,LOC102215561 coding downstream 109558 12720716 ~ 12725372 (+)
cbln12 cbln3,LOC103360302,LOC104927970,LOC101077223,LOC104956581 coding downstream 114454 12725612 ~ 12728919 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 6235 12601183 ~ 12602922 (+)
G113811 NA non-coding upstream 252436 12356340 ~ 12356721 (+)
G113782 NA non-coding upstream 387473 12221376 ~ 12221684 (+)
G113778 NA non-coding upstream 399717 12208714 ~ 12209440 (+)
G113777 NA non-coding upstream 400839 12208104 ~ 12208318 (+)
G113852 NA non-coding downstream 14921 12626079 ~ 12627519 (+)
G113938 NA non-coding downstream 167182 12778340 ~ 12779398 (+)
G113956 NA non-coding downstream 250467 12861625 ~ 12874310 (+)
G114000 NA non-coding downstream 415921 13027079 ~ 13028170 (+)
G114008 LOC104953400 non-coding downstream 540941 13152099 ~ 13153594 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 9317 12582642 ~ 12599840 (+)
LOC120568189 nop9 other upstream 442880 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 481135 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 1262932 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1722679 10885595 ~ 10886478 (+)
LOC120568152 LOC104963178 other downstream 290381 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 300281 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 318057 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 341390 12952548 ~ 12960349 (+)
col6a1 col6a1 other downstream 399417 13010575 ~ 13074594 (+)

Expression


Co-expression Network