LOC120568045 (fam134b)


Basic Information

Item Value
gene id LOC120568045
gene name fam134b
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 5888027 ~ 5917140 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815240.1
TCTCTGCTGGAGGATAGAGCGACAGAGCGGAGGGGCGCCGGTCGTCTTCCAATGCTGGGGAGCCGGGAAACAGGAACCACTGGCTGCGGGGAGGCGGCTTCCGGGCCGCAGGGGCCGCAGGGGCCGCTGAGCCGGGCACACCGCGGGAAGGAGACGCCTCCCGGCCGTCAAGGGTGTCGTCTCACCGGCCTGGTCAACTGGAGGCAGAGACCGGGCAGGACTTCAGCCCTGTTTGCTGCAGCCAACACGGTGATCTGGTTCGTGGCCTTCAGCTCTTTCCGAGCCTACAGCCTCCTGGCCGGCCTGTTGACTCTGCTGGTCCTCACGGTGACCGCCAGAGACATCGCTCGATCCAGATCCACAGGAGCTCACTTATGGCGCAGCATGACTGCAAGCTGGGAGATCATTGACTCAGGCCAGGACAGCCCATCTGGGACTGGACCTCAGCTCAGCGACTCCCTCAACCTCTTCATCCAGGAGACATCGGCTTTCAAACAGCAAAACCCTGGCAAGTTTTGCCTGCTGGTTTGCAGTTTCTGCACCTTTTTTGCTGTCTTAGGACGCTACATTCCAGGGATTGTTATCTCATATATTCTAGTGCTGGGCATTTTCCTGTGGCCTCTGATCTCATTTCACGAGGTCGGTTTGTGGCTAAAGCCAGTTCTGCAGAAGCTGGACTTTGGCATCGGGGAGTTCCTTCGGAAAATCAAAGAGAAACATGAGAAGAAAATGATGCAGGCTCAGACTGAGAAAGAAGGCATCGAGTCGGACCTCTCTTCCATGTTTCCCAAGCTTGACTCCACAGTGTGTAAGGAAATGTCTGTATCAGACACAGAGGTGTCTGACGTGACGTGGACGGACAACGGTACTTTCAACCTGTCAGAAGGACACACACCCCAGACTGAGAACTCAGAGGACTTTGACAGAGAAGAAGCGTTCATTGGAGGCCTTCCAGAATTCCCCTCAGTTGACAATGGCACAACGACCAATGGCGACGATGACGATGACTTCAGCCTCGGCCTTCCCTCGCCTTCACCTCAGCTGCCAATCAAATCCAAGCATACACCCTCTGCTCACGAAGACCAAACCACCGACAAAGCCCTTGAATTAGTCAACCAGATGGCGGGCGACTTCATTGCCGCCGCAGTCACAGCTGCCATGCAGGAGAGAATAGAAGCAGCGGTCGGCTTCACAGCGCTGAGCTCCAACACCACGCGGTCAAGACTCCCAGATACCACCAGGCTGCTGGAGCTGGCCGAGGAGTCGGACAGCGAGGTGGAGGACTTTGAGCTGCTGGACCAGTCGGAGCTGGAGCAACTGGAGGGGGACCTGGGGCTGGGAGAGGAGAAGGCCCAGGccaaagaggaggaagagagtgaCCAGCCGGCCTCTTCTGGTTTCTTTGCCAAACTCCTGAGACGCCACTGATTGATGAAAGGTACGATCCGCGGGGGAGGACGACTTACAGAGGACGTGTGGACGGGAGATGGGAGTGTTCTGGTTACAAAGGACTGTTGGGGATAGTGAGAAAGCAATGTTTCCATTTATCTTTATCCTGTAGAGCTATCatcaacattttaaaactgGTCAGTTTGTCAAAGGTGAAAGTCATGTTACTTTAATCAGAATCATCCTAGATTAATGCCGTGATCAGACTACACGATATCGGCCCCATAATGGCCCTGGCCCAACAGACGTGGCTACGAAATGGGGTGTTGGGTGTCTTGTTTTATCCTGTGTAGTATGTGATAGTGAAAAAACTGAGACGCCTCACAACATCCCGACCTAAAGAGGACTGTGTCATTCCTTCTTTTACCGAGTTTGACAACACCTACAACATGTGCCATCAAGTTGATGTGAGCAGAATGAAACACTTGTGAACAGTTTTCACCAAAAAAACATGTAGGGGGCTTGTGCAATCTGCATGTGTctctgcatatttatttattttttaacatttatttggTTACTTGTGCGCCCCTACAGTTTTTGCCCTTATTGCCCAGAAGTCAGCTCAGAGCAAATTTGATTAACCTACTGGTCCATAATGGTCCATGACCGTTATGAAATACAAACATATTGTATATTCTGATCCCGGCATAACAATGTTGATGGTTTAGGGCCTCTTTAGTTGTAATTAATTGCAGCAGTTTCATATGTCTTTTCAAAGCATCTTGTATCACTTCAtgacatttgatttgatttgccAAAATGTCAGCTCACAACACCCTTAACACTCACTTTGATGCTGAATTGATTAATCCAACTACATTACCCAGAATTCCACAGGCATAAAATCAAATGACAATCAATAGGCAATCAAAACACCTTTAATACTCAAAATACTACTACTGGTTGGATAGTTGACTATGAGGATTCAAAAATAGGAAacctttctatttttttttatttccttttttaattttatatgtACTTTTTCATAAATCATTTATGTAGTCAATGGGCTTTTATTTTATAACAACATGCAGCAGGTCTCTCAATACTATGCATGGAAATGTCAATTTGAgacataaatatatttaaacatctaaacattttactttcagtgcTTGGGCAAAAACCAAATCCAAAACACTTACCAGACTCATATTTTGCTGACAGGTTCGTCTTCAGCTGAGAGGTTCAATCAACATTCAGtggatgttattttttttttggggagaaaTATCTCCTAACAAAGTCAGATGCTGGCCTTGGGAGTTACATTCCTACAAAGCCACTGAACAAAACTCATTGTGGAAAATGGAGTTCCAGCCTTAGGACCATCTCATTTGTGTCTATTTTTCTGGCTTCATCACTTAGTCAGCTGataaatttcccatttaaagcTATATTAAGCAAATGTTGACCGATTTGGGGCAAAAAGTTTGAAGAAAAGTGCATCGGAAATAGACAAGACCTACAGCAACAGAAGGGACACTACCTGTATTCGGTTAGACTATATATAATTGGGACTAGGCTCGACTTAAGTCCCTGGTCAAGTCTCGGCTAGTAGGAACTAAGTAAACCCATGAAGACCTCTGCTCCTCAgctgcaacacattctcatccCAACACGTCACATACTGACATTTTGTCATATGTACGTTTAAGTGACGTGCAGGAAaagaacgggacacaaaccGCAGTCTtgtgggtgaaagtcctgtgctgATTGGCACAACCACCACCCTGACCCCCTTCTTAAGCAGGCTTTGTCACTCTTACTTCTGTGCCACTTGCACTTAGCGTCTAATACAGCCTCATATGGGTTTGCGGTTTAAAGCCTGTTTCATGCAGGTGCTAAAGTATCAATCGTGAGGACCCAGAcaaagcgtcagtatttgactCCCTGGGAATAAGAATATGCTGCATTGTCATTGGATGATCGGAAATTTGACTCAAAATGATGTAAAATTTAGtttcagtgcactgaaagtaaaatgtTATGATGTGGCATATTTCCATTTGCACCTTAATTATTATTTCACAATGCACCTTCGGAGGGCAGTCTGCTGTGTCAAGTATCAGTCGTGGATTCACAGAATGATTGAACATTTACATGCCttgtacattaaaatacatgtttttttataataaagacACACAGTAATGTATAATGTATTATCTTGAATTAATCATTTAATGCCTTGTATTAGCATAACTAAAGATGACAATAGAAATATTTGTTTATCAGTGCCTAAGAGGACTTTATAGTAGATGCAGTTAATTTCAAGCTCAGATGTGATAACTGTTTAAAACAAGTGTTTAGGAAGGTTCATGCTTCACTAAATAAATTGATAATCCTTTCaatttagttcaaaaacatgttGGTTGGTCAGAACCAAAatgcatttacaaatgtactTTTATGTAATTAAACTCAAGAATGTCAATAAAATATTGCGAGGCAA

Function

NR:

description
PREDICTED: protein FAM134B, partial

GO: NA

KEGG:

id description
K23880 RETREG; reticulophagy regulator

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815240.1 True 3913 mRNA 0.45 9 5888027 5917140

Neighbor

gene id symbol gene type direction distance location
LOC120568924 NA coding downstream 2610 5874452 ~ 5885417 (-)
LOC120567973 NA coding downstream 19617 5842529 ~ 5868410 (-)
LOC120567975 NA coding downstream 75665 5810326 ~ 5812362 (-)
znf622 znf622 coding downstream 169810 5705604 ~ 5718217 (-)
march11 march11 coding downstream 188787 5684216 ~ 5699240 (-)
nol7 NA coding upstream 60141 5977281 ~ 5982538 (-)
LOC120568550 LOC107380363,LOC107396089,LOC107391794,LOC107390451 coding upstream 128182 6045322 ~ 6046252 (-)
LOC120568053 NA coding upstream 143585 6060725 ~ 6062992 (-)
LOC120568672 NA coding upstream 160011 6077151 ~ 6078837 (-)
LOC120567957 NA coding upstream 248008 6165148 ~ 6169113 (-)
G112332 NA non-coding downstream 96264 5774413 ~ 5791763 (-)
G112253 NA non-coding downstream 166057 5720657 ~ 5721970 (-)
G112245 NA non-coding downstream 183453 5704296 ~ 5704574 (-)
G112241 NA non-coding downstream 190086 5697688 ~ 5697941 (-)
LOC120568187 NA non-coding downstream 229665 5652999 ~ 5658362 (-)
G112352 NA non-coding upstream 5607 5922747 ~ 5993773 (-)
G112383 NA non-coding upstream 165501 6082641 ~ 6105817 (-)
G112381 NA non-coding upstream 196322 6113462 ~ 6116144 (-)
G112453 NA non-coding upstream 430195 6347335 ~ 6347853 (-)
G112460 NA non-coding upstream 439658 6356798 ~ 6357990 (-)
G112328 NA other downstream 35580 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 141946 5723733 ~ 5746081 (-)
G112233 NA other downstream 219340 5664004 ~ 5668687 (-)
G112046 NA other downstream 1603944 4267538 ~ 4284083 (-)
G112043 NA other downstream 1649357 4238102 ~ 4238670 (-)
LOC120567959 NA other upstream 255141 6172281 ~ 6178886 (-)
zmynd11 zmynd11 other upstream 778470 6695610 ~ 6736512 (-)
si:ch211-267e7.3 LOC103370300 other upstream 1039300 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 1159469 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 2570327 8487467 ~ 8487539 (-)

Expression


Co-expression Network