LOC120568054


Basic Information

Item Value
gene id LOC120568054
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6030953 ~ 6053260 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815248.1
CTTTAAAAAGGACTGGAGACAACATCGGAAGTAAAGAGCAACATTAGTTGACGAGCAGCAAATATAGCGGTAAGAGAAAAGAAGATACAAAAAGCTGCAGTAATGTCCAGCAGAAGCATGCGGAGCTGATGACCTACAGCAGCCGGATAGCAGCCGCATGTTGAAACCCAGTGTGCTGCGCTGCCCCGCCCCGTTAAGAGAAACCTCCTCCTGCTGGAAGCATGAAAGCCTGATAActcctccctcttcttcctGCTGATAAATACAGCCAGCTCCACGCTGAGCACAAGCGGACTTGTTATCTCCAACTCACGGAAGGAACAGGAACAAATGGAAGTGAGTTATTTTTGAGTCAGAGCACAGACTCATATTTCTGTTCAGAGAAACTCTCAAACAGTAACTGCCACgaggtgaaatggcgcagaaaAGAGTTAAGCTGGACCGGGAAACTTTCTCTTGTGTGATTTGTttggatctactgaaggatccggtgactactccctgtggacacagctactgcatggACTGTATTCAACGCCACTGGGATGAAGAGGATGGGAAGCAGATCTACAGCTGTCCTCAGTGCAGAAAGACTttcacaccgaggcctgtcctgctgaaaaacaccatgttatCAGATTTAGTGGAGGAACTGAAGAAGACTGaactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCCCTCAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGTGATCAACACCTTCAGCCTCATTATGACTCCTCTGCGTTtgagaaacacaagctggtggagcccTCCAAGAATCTCCAGGAGAACATCTGCTCTCAtcatgatgaggtgatgaagatgttCTGCCGTACTGATCAGCAGTGTATCTGTTCTCTCTGCTTAATGGAtgaacataaaggccacgacacagtcttagctgcagcagaaaggactgagaggcagaaagagCTCGAGGGGAGTCAacaaaacatccagcagagaatccaggacagagagaaagatatgaagctgcttcaacaggAGGTGGAGGCTATCAATCGCTCTGCTGATAAAGTAGTGAAGGACAGTGGGAAGATCTTCACTGAGCTGATCCGTCTCATCAAGACAAGACGCTCTGATGtggagcagcaggtcagattccaGCAGAAAACTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagaccactgagctgaagaggaaagacgCTGAGATGAAGAAGCTCTCAGacacagaggatcacaaccagtttctacacaactactcctcactgtcaccactcagtGAATCTACATCCAGCATCGATATCCGTCCTCTGCGCTACTTTGAGGATGTGACAGCGGCCGTGTCAGACTCcagagataaactacaggacgtCCTGAGAGACACATGGACAAACATCTCACTGGCTGTGACTGAAGTGGATGTTTTACTGTCACAACGagagcccaagaccagagctgacttCTTAAAATATTGGCGTGACATCAgactggatccaaacacagcacaCCCAAAGCTGGTTTTATCCAAGGGGAACAGAAAAGCAACAGCTGTGGAAGAAGAACAGCCTTACCGTCGTCACAAGGACAGATACACCACTACTTTACAGGTCATGAGTAGAGGGAGTTACgctggacgttgttactgggaggtggagtgCTTTGGGAGATTTTATGTCGCAGTCTCATACAAGGGTGTCCgcagaaaaaagaaagcaacTGCATGTGCATTTGGACTCAATGACAAGTCTTGGGTGTTAGATTGTTCCcaacacaaatatacatttgTGTACGACTCAGAGGACACACCCGTCTCAGGGCACGAGGTCACCAGactaggagtgtacctggaccACAGCGCAGgtactctgtccttctacagcatCACTaaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTACGCTGGACTTGGGTTTTTCTGGTACGGATCCAGTGCTGAGTTTTGTGAACTAGAATAGACAGAAATCATGGTTGAATTCCAGAGTTTTGGACTGTGAATGTTTGTTGCGGAGAGCTGTTTGTTTCTCGTCAGCCATCGATGCTCGTGCTGATGTTTGTTGACTTGAACTAAAAATGGAAAAccattctgctaaaatacaacaaattgcttgttgaatttaaaacaaacgaaAGGAAATATTTTCCAACcatattttattgaacaaatttaacattggattaaatataaaatgcaCCACAAAAAAAGAATGAGAGTATCTTTTTgaactgatattttctttcaacttacACAAAGAatctgagtgtctttcgcgatatgtcgcaaCCTTTCGCGATGTGTACAAAgcaccagttgatattgcgataacgatttaaaaaaacaatatattgtgcccTAGTCCATATcagtataaaaatatataaaacacaacaacacagacaagaCAAGAAAGTTATATGCATTGCAGTCCATAAGTCTCATACACACATTTGTTCCAATGCTTCCAAAAGCAAGAAGTGTGCCTTGTGTCACTCGGTGTGGGCTCAGTTTAAAGCCATTATAATTACTTTGTTACGCGACACATAAATGTGTACACATTTGTGAGGTTGTATGTTCCTTTATCATAGATATTTTGTTCTCACCACTTTAAAATTTGTGAAGAAATCGATAATCACATTTACATAGATTTTTGTTTGGCAGACCTGTGAGTTATTATAAAACTAATTATCCTAATCAATAAGGCTATAATTTCATATTCTCTTCAACATAGCTGAGATTCTGTTTCAATATAGTTTTCAACctgttcttgccttccttcctccttccttccttccttccttccttccttccttccttccttccttccttccttcctttttttttacggTCTTCTATTTTTCTGTAAGTTTGTCAAAGTTTAttcgcttaaaaaaaaaaaatccgcctttttccaagttttggttactttttttga
>XM_039815249.1
GAGCAGCAAATATAGCGCATGTTGAAACCCAGTGTGCTGCGCTGCCCCGCCCCGTTAAGAGAAACCTCCTCCTGCTGGAAGCATGAAAGCCTGATAActcctccctcttcttcctGCTGATAAATACAGCCAGCTCCACGCTGAGCACAAGCGGACTTGTTATCTCCAACTCACGGAAGGAACAGGAACAAATGGAAGTGAGTTATTTTTGAGTCAGAGCACAGACTCATATTTCTGTTCAGAGAAACTCTCAAACAGTAACTGCCACgaggtgaaatggcgcagaaaAGAGTTAAGCTGGACCGGGAAACTTTCTCTTGTGTGATTTGTttggatctactgaaggatccggtgactactccctgtggacacagctactgcatggACTGTATTCAACGCCACTGGGATGAAGAGGATGGGAAGCAGATCTACAGCTGTCCTCAGTGCAGAAAGACTttcacaccgaggcctgtcctgctgaaaaacaccatgttatCAGATTTAGTGGAGGAACTGAAGAAGACTGaactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCCCTCAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGTGATCAACACCTTCAGCCTCATTATGACTCCTCTGCGTTtgagaaacacaagctggtggagcccTCCAAGAATCTCCAGGAGAACATCTGCTCTCAtcatgatgaggtgatgaagatgttCTGCCGTACTGATCAGCAGTGTATCTGTTCTCTCTGCTTAATGGAtgaacataaaggccacgacacagtcttagctgcagcagaaaggactgagaggcagaaagagCTCGAGGGGAGTCAacaaaacatccagcagagaatccaggacagagagaaagatatgaagctgcttcaacaggAGGTGGAGGCTATCAATCGCTCTGCTGATAAAGTAGTGAAGGACAGTGGGAAGATCTTCACTGAGCTGATCCGTCTCATCAAGACAAGACGCTCTGATGtggagcagcaggtcagattccaGCAGAAAACTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagaccactgagctgaagaggaaagacgCTGAGATGAAGAAGCTCTCAGacacagaggatcacaaccagtttctacacaactactcctcactgtcaccactcagtGAATCTACATCCAGCATCGATATCCGTCCTCTGCGCTACTTTGAGGATGTGACAGCGGCCGTGTCAGACTCcagagataaactacaggacgtCCTGAGAGACACATGGACAAACATCTCACTGGCTGTGACTGAAGTGGATGTTTTACTGTCACAACGagagcccaagaccagagctgacttCTTAAAATATTGGCGTGACATCAgactggatccaaacacagcacaCCCAAAGCTGGTTTTATCCAAGGGGAACAGAAAAGCAACAGCTGTGGAAGAAGAACAGCCTTACCGTCGTCACAAGGACAGATACACCACTACTTTACAGGTCATGAGTAGAGGGAGTTACgctggacgttgttactgggaggtggagtgCTTTGGGAGATTTTATGTCGCAGTCTCATACAAGGGTGTCCgcagaaaaaagaaagcaacTGCATGTGCATTTGGACTCAATGACAAGTCTTGGGTGTTAGATTGTTCCcaacacaaatatacatttgTGTACGACTCAGAGGACACACCCGTCTCAGGGCACGAGGTCACCAGactaggagtgtacctggaccACAGCGCAGgtactctgtccttctacagcatCACTaaaaccatgactctcctccacagagtccagaccacattcactcagccgctcTACGCTGGACTTGGGTTTTTCTGGTACGGATCCAGTGCTGAGTTTTGTGAACTAGAATAGACAGAAATCATGGTTGAATTCCAGAGTTTTGGACTGTGAATGTTTGTTGCGGAGAGCTGTTTGTTTCTCGTCAGCCATCGATGCTCGTGCTGATGTTTGTTGACTTGAACTAAAAATGGAAAAccattctgctaaaatacaacaaattgcttgttgaatttaaaacaaacgaaAGGAAATATTTTCCAACcatattttattgaacaaatttaacattggattaaatataaaatgcaCCACAAAAAAAGAATGAGAGTATCTTTTTgaactgatattttctttcaacttacACAAAGAatctgagtgtctttcgcgatatgtcgcaaCCTTTCGCGATGTGTACAAAgcaccagttgatattgcgataacgatttaaaaaaacaatatattgtgcccTAGTCCATATcagtataaaaatatataaaacacaacaacacagacaagaCAAGAAAGTTATATGCATTGCAGTCCATAAGTCTCATACACACATTTGTTCCAATGCTTCCAAAAGCAAGAAGTGTGCCTTGTGTCACTCGGTGTGGGCTCAGTTTAAAGCCATTATAATTACTTTGTTACGCGACACATAAATGTGTACACATTTGTGAGGTTGTATGTTCCTTTATCATAGATATTTTGTTCTCACCACTTTAAAATTTGTGAAGAAATCGATAATCACATTTACATAGATTTTTGTTTGGCAGACCTGTGAGTTATTATAAAACTAATTATCCTAATCAATAAGGCTATAATTTCATATTCTCTTCAACATAGCTGAGATTCTGTTTCAATATAGTTTTCAACctgttcttgccttccttcctccttccttccttccttccttccttccttccttccttccttccttccttccttcctttttttttacggTCTTCTATTTTTCTGTAAGTTTGTCAAAGTTTAttcgcttaaaaaaaaaaaatccgcctttttccaagttttggttactttttttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815248.1 True 3055 mRNA 0.44 2 6030953 6053260
XM_039815249.1 False 2916 mRNA 0.44 2 6031005 6053260

Neighbor

gene id symbol gene type direction distance location
ranbp9 ranbp9 coding upstream 59542 5937309 ~ 5971411 (+)
rnf182 NA coding upstream 106022 5917149 ~ 5924931 (+)
myo10 myo10 coding upstream 362236 5501683 ~ 5668717 (+)
LOC120568538 NA coding upstream 622332 5404453 ~ 5408621 (+)
adcy8 adcy8 coding upstream 694461 5199093 ~ 5336492 (+)
LOC120568059 NA coding downstream 2498 6055758 ~ 6057484 (+)
stard3nl stard3nl coding downstream 31469 6084729 ~ 6105817 (+)
LOC120569021 NA coding downstream 138512 6191772 ~ 6250662 (+)
trnas-cga_6 NA coding downstream 186921 6240181 ~ 6240262 (+)
trnas-uga_21 NA coding downstream 187562 6240822 ~ 6240903 (+)
G112286 NA non-coding upstream 19151 5967053 ~ 6011802 (+)
G112283 NA non-coding upstream 102017 5926674 ~ 5928936 (+)
G112282 NA non-coding upstream 102951 5925878 ~ 5928002 (+)
LOC120568048 NA non-coding upstream 132542 5893923 ~ 5898411 (+)
G112252 NA non-coding upstream 310313 5719421 ~ 5720640 (+)
G112301 NA non-coding downstream 7698 6060958 ~ 6070370 (+)
G112302 NA non-coding downstream 9543 6062803 ~ 6070610 (+)
G112314 NA non-coding downstream 66585 6119845 ~ 6174755 (+)
G112401 NA non-coding downstream 164633 6217893 ~ 6218669 (+)
G112411 gtpbp4,LOC102796845 non-coding downstream 239492 6292752 ~ 6294447 (+)
LOC120568055 NA other upstream 14353 6003685 ~ 6016600 (+)
epdr1 epdr1,LOC104965688 other upstream 37242 5983857 ~ 5993711 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other upstream 241536 5788223 ~ 5789417 (+)
dnaaf11 NA other upstream 1438606 4498994 ~ 4592347 (+)
G111910 NA other upstream 1484871 4545425 ~ 4546082 (+)
G112400 NA other downstream 198130 6251390 ~ 6321990 (+)
LOC120568552 dip2c other downstream 521536 6574796 ~ 6682272 (+)
G112562 NA other downstream 687841 6741101 ~ 6770912 (+)
LOC120568557 NA other downstream 819065 6872325 ~ 6873814 (+)
LOC120568216 NA other downstream 837727 6890987 ~ 6949130 (+)

Expression


Co-expression Network