LOC120568059


Basic Information

Item Value
gene id LOC120568059
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6055758 ~ 6057484 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815251.1
TGAGACTCAGACAGTGCTGTTTTCACtgagaggtgaaatggcgcagagaggagttcagctggaccgggaaaccttctcttgtgtcatctgtctggatctactgaaggatcctGTGACTACTTcctgtggacacagctactgtATGGACTGTATTAAAGCTCACTGGGATGAAGAGGATGAGAAGCAGATCTACAGCTGTCCCCAATGCAGGCAGACTTTCATACcgaggcctgtcctgctgaaaaGCACCATGTTATCAGATATAGTGGAGCaactgaagaagactggactccaagctgctcctgctgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCCCTCAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGTGATCAACACCTTCAGCCTCATTATAACTCCTCTGCGTTtgagaaacacaagctggtggagcccTCCAAGAATCTCCAGGAGAACATCTGCTCTCTtcatgatgaggtgatgaagatgttctgtcgtactgatcagcagtgtatctgttatctctgctctgtggatgaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagCTCGAGGTGAGTCAACAAAACATCCAtcagagaatccaggacagagagaaagatgtgaagctgcttcaacaggAGGTGGAGTTTATCAATCGCTCTGCTGATAAAGTAGTAGAGGACAGTGAGAAGATCTTCACtgagctgatccgtctcctggagaaaagaCGCAATGCTGTAAAGCAGAAGGTCAGATCTCAGCAGAAAACTGAAGTGAATCAAATCAAAGAGCTTCAGAAGAAGCTGGAtcaggagatcactgagctgaagaggatCTCAGACACAGAGGATGACAACCAGTTTCTTCAAAATTACTCCTTACTCGCACCAGCCGGTGAATCTACATCAAGCATCCATATCCGTCCTCTGCGCTACTTTGAGGACATGGCAGCGGCCGTGTCAGAATTCAAAAAGAAACTACAGGATGTTCTAAAAGAGCTATGGTCAACAACAGTGACTGAAGTGGATGTTGTACTGCCATATTCACAACAAGAGCCCAAGACCAGAGAAGAATTCTTGAAATATTCACTTGAACTCACACTGGATCCCAACACGGTGAACACATAtctgttattatctgaggggaacaggaaagcaacatTAATGAGTAAGGAACAGTTttattctagtcacccagacagattcgCTACATGTTGTCAGGTCCTGAGTAAAGAGGGTCTGACCAGAcactgttactgggaggtgagagggagaggaggagtttACGTCGCAGTCGCGTACAAGAACATCAGCAGAGGGGGGAAATCGACCGATTGTAGATTTGGATTCAATGACAAATCTTGGGCATTGGATTGTGACAAAATCAGTTACACATTTTGGCACAACAAAGTCCAAACTCCCATCTCAGGTCCTCCATCTaccagagtaggagtgtacctggaccACGGCGCAGGtcttctgtccttctacagcgtctctgacaccatgactctcctccacagagtccagaccacattcactcagccgctcTACGCTGGACTGTGGCTTTGTTTTGATGGAGGCACTGCTGAGTTATCTTAACTCAGATAGACAGACTAGGCCCGTAGCCATGCAGCCTAGTGGAAGGGGGTTTCGGTTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815251.1 True 1727 mRNA 0.47 1 6055758 6057484

Neighbor

gene id symbol gene type direction distance location
LOC120568054 NA coding upstream 2498 6030953 ~ 6053260 (+)
ranbp9 ranbp9 coding upstream 84347 5937309 ~ 5971411 (+)
rnf182 NA coding upstream 130827 5917149 ~ 5924931 (+)
myo10 myo10 coding upstream 387041 5501683 ~ 5668717 (+)
LOC120568538 NA coding upstream 647137 5404453 ~ 5408621 (+)
stard3nl stard3nl coding downstream 27245 6084729 ~ 6105817 (+)
LOC120569021 NA coding downstream 134288 6191772 ~ 6250662 (+)
trnas-cga_6 NA coding downstream 182697 6240181 ~ 6240262 (+)
trnas-uga_21 NA coding downstream 183338 6240822 ~ 6240903 (+)
LOC120568706 larp4b coding downstream 244811 6302295 ~ 6351741 (+)
G112286 NA non-coding upstream 43956 5967053 ~ 6011802 (+)
G112283 NA non-coding upstream 126822 5926674 ~ 5928936 (+)
G112282 NA non-coding upstream 127756 5925878 ~ 5928002 (+)
LOC120568048 NA non-coding upstream 157347 5893923 ~ 5898411 (+)
G112252 NA non-coding upstream 335118 5719421 ~ 5720640 (+)
G112301 NA non-coding downstream 3474 6060958 ~ 6070370 (+)
G112302 NA non-coding downstream 5319 6062803 ~ 6070610 (+)
G112314 NA non-coding downstream 62361 6119845 ~ 6174755 (+)
G112401 NA non-coding downstream 160409 6217893 ~ 6218669 (+)
G112411 gtpbp4,LOC102796845 non-coding downstream 235268 6292752 ~ 6294447 (+)
LOC120568055 NA other upstream 39158 6003685 ~ 6016600 (+)
epdr1 epdr1,LOC104965688 other upstream 62047 5983857 ~ 5993711 (+)
LOC120568547 LOC106674584,LOC106676354,LOC106675207,LOC106675343,LOC106676464,LOC106676424,LOC106675739 other upstream 266341 5788223 ~ 5789417 (+)
dnaaf11 NA other upstream 1463411 4498994 ~ 4592347 (+)
G112400 NA other downstream 193906 6251390 ~ 6321990 (+)
LOC120568552 dip2c other downstream 517312 6574796 ~ 6682272 (+)
G112562 NA other downstream 683617 6741101 ~ 6770912 (+)
LOC120568557 NA other downstream 814841 6872325 ~ 6873814 (+)
LOC120568216 NA other downstream 833503 6890987 ~ 6949130 (+)

Expression


Co-expression Network