LOC120568069


Basic Information

Item Value
gene id LOC120568069
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 6749460 ~ 6751778 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815263.1
AAATGGCGCAGCaaggagttcagctggaccgggaaactttctcttgttccatctgtctggatctactgaaggatccggtgactattccatgtggacacagctactgtATGAACTGTATTCAAGAGTTCTGGGATGGAAAAGATGAAAACCAAATCTACAGCTGTCCTCAGTGCAGGGAGACTttcacaccgaggcctgtcctgctgaaaaacaccatgttagcagatttagtggaggagctgaagaagactggactccaagccTCTCCTGatgatcactgctatgctggagctgaagatgtggcctgtgatgtctgcactggGAGAAAACTGAAAGCCCTCAAGTCCTGTCTGGTGTGTCTGGTCTCTTACTGTGATCAACACCTTCAGCCTCATTACGAATTACctgtatttaaaaaacacaagctggtggagcccTCCAAGAATCTCCAGGAGAACATCTGCTCTCTtcatgatgaggtgatgaagatATTCTGCCGTACTGATCAGCAGTGTATCTGTTCTCTCTGCTTAATGGAtgaacataaaggccacgacacagtctcagctgcagcagaaaggactgagaggcagaaagagCTCGAGGTGAGTCAacaaaacatccagcagagaatccaggacagagagaaagatgtgaagctgcttcaacaggAGGTGGAGGCTATCAATCGCTCTGCTGATAAAGCAGTGAAGGACAGTGGGAAGATCTTCACTGAGCTGATCCGTCTCATAGAGAAAAAAAGCTCTGATGtggagcagcaggtcagatcgcAGGAGGAAACTGAAGTGAGTCGAgtcaaagagcttcaggagaagctggagcaggagatcactgagctgaagaggaaagacgCTGAGATGAAGAAGCTCTCAGacacagaggatcacaaccagtttctacacaactactcctcactgtcaccactcagtGAATTTCCAGCCTCACCCAGCATCAATATCTGTCCTCTGCGCTACTTTGAGGACATGACAGCGGCTgtttcagaagtcagagataaactacaAGACCTTCTGATAGAGACATGGGCTAATATCTCCCAGGCTGTGACTGAAGTGGATGTTTTACTGCcacaaccagagcccaagaccagagctgacttCCTTAAATATGCACGtgaaatcacactggatccaaaaacagctcacacacagctgttattatctgagggCAACAGGAAAGCTACATTAGTGGGACAACAACAGCGCTTttctagtcacccagacagattcactaAAGAGTttcaggtcctgagtagagagagtctgactggacgttgttactgggaggtggagtggAGAGGCGAAGTCATTTATGTAGCAGTCTCATACaaaaatatcagcagagcatGTAGTCCGATTGTATGTAGATTTGGATGGAATGACAAATCTTGGGCATTAAGATGTGACAAAAACAGTTATAAGTTTTTGTACAACAATGTCCAAACTCTTGTCCCAGGTCCTgtgtcctccagagtaggagtgtacctggatcacagggCAGGTACTCTGTCCTACTACAGCGTCTCTGacaccatgactctcctccacagagtccagaccacattcactcagccgctcTACGCTGGACTGTTGCTTCACTCTTCTTCTTTTGGAGACACAGCTGAGTTCTGTAAACTcaaatagacagaagtcattaAATGGTTAGCTTCTGTTTTAACTCTTTAACCCATTttgtctccatgtttgttgctgAGAGCTGATTGTGGTGGCATTTCTTCACTGCACAGAgatcagctgtcaatcaaacattaTGGGATGTACTTTGACATCTTCATATTAgttaattaattagttaattagtGTAAatgcttgtgtttctttaggTGACTCTCCTTCCTGTGTCTGTTTAGCCATGGAGGCTATCACTGATGCTCATGATGATGTTAGTTGATCTGAAGTGAAAATGTCAACTTCTCTGTTATCTAAATATTTGATTAATatttgtattgatttatttgtaggTTGTTGTTTCTCTTCCACTGCATGAGtctgaagagagaaagcacCAGACCTTCTTTATCCTAGATATTTTATTCTCTTTGTGtacatattaaatattttttttgtttggcagACCAAATGTTATTGTTATATTGTATTATAGAACTGTATTCATTCTGATAATAATCAATGAGTGAGATAAGATTCAAACAAGGCGATTGTGTGGATGAAGTGAATCTGTTAACATTTAACAGACGTTACTGATGGAATGTGTGAACAAACTGAAGGTTTACATGatgaataaactaacatgaacaaa

Function

GO:

id name namespace
GO:0008234 cysteine-type peptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815263.1 True 2319 mRNA 0.43 1 6749460 6751778

Neighbor

gene id symbol gene type direction distance location
LOC120568556 NA coding downstream 641 6747454 ~ 6748819 (-)
LOC120568066 NA coding downstream 5759 6741098 ~ 6743701 (-)
LOC120568553 NA coding downstream 9024 6739258 ~ 6740436 (-)
gtpbp4 gtpbp4 coding downstream 449489 6284160 ~ 6299971 (-)
LOC120569024 wdr37,LOC102795438 coding downstream 465962 6256300 ~ 6283498 (-)
LOC120568073 NA coding upstream 6076 6757854 ~ 6760136 (-)
LOC120568067 NA coding upstream 9244 6761022 ~ 6764050 (-)
LOC120568070 NA coding upstream 13270 6765048 ~ 6768898 (-)
LOC120568072 NA coding upstream 21742 6773520 ~ 6775693 (-)
LOC120568496 vipr2,LOC107383421,LOC102775707 coding upstream 52130 6803908 ~ 6867658 (-)
G112581 NA non-coding downstream 14480 6690670 ~ 6734980 (-)
G112590 NA non-coding downstream 22693 6726411 ~ 6726767 (-)
G112578 NA non-coding downstream 53959 6691784 ~ 6695501 (-)
G112582 LOC106568825,LOC106599479 non-coding downstream 66759 6681961 ~ 6682701 (-)
G112587 NA non-coding downstream 78734 6670445 ~ 6670726 (-)
G112617 NA non-coding upstream 122887 6874665 ~ 6949132 (-)
G112648 LOC106604074 non-coding upstream 243280 6995058 ~ 6998925 (-)
G112652 NA non-coding upstream 252386 7004164 ~ 7005382 (-)
G112654 NA non-coding upstream 254894 7006672 ~ 7006980 (-)
G112683 NA non-coding upstream 306669 7058447 ~ 7058835 (-)
zmynd11 zmynd11 other downstream 12948 6695610 ~ 6736512 (-)
LOC120567959 NA other downstream 570574 6172281 ~ 6178886 (-)
G112328 NA other downstream 897013 5793163 ~ 5852447 (-)
LOC120568546 NA other downstream 1003379 5723733 ~ 5746081 (-)
G112233 NA other downstream 1080773 5664004 ~ 5668687 (-)
si:ch211-267e7.3 LOC103370300 other upstream 204662 6956440 ~ 6990122 (-)
cdh6 LOC103366829,LOC104926815 other upstream 324831 7076609 ~ 7163670 (-)
trnak-uuu_16 NA other upstream 1735689 8487467 ~ 8487539 (-)
G113070 NA other upstream 2028674 8780452 ~ 8790042 (-)
chd7 chd7,LOC103370133,LOC102782711 other upstream 2362606 9114384 ~ 9194872 (-)

Expression


Co-expression Network