gk5 (gk5)


Basic Information

Item Value
gene id gk5
gene name gk5
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33273117 ~ 33285466 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815267.1
ATGGGGTGTCAGCGGAACGGTTTCAAGAAGGAAAGCTTCATTTTGTCGGTGGACGTCGGGACAACATCCATCAGATGTCAGGTCTACGACAAGGAGGCGAAAATCCAAGGAGCATGCACCGCCAAGGTTGTTCCCTTGTATCCAGAGGTAGGGTATGTGGAGATGGACCCAGATGCGATATGGAAAGGGTTTGTCACTGTGGTCAAAGGAGCTGTGCAAGATGCAGGAGTCCAAATGCATCAGATAGACGCCCTGGGCATCTCCACTCAACGAGGCACCTTCACAACATGGGACAGAAGAACTGGGGTTCCTTTCCATAACTTCATAAGCTGGCAGGATCAGAGGGCTGCAGACCTGGTGAAATCCTGGAACAGTTCCTGCACCTTGAAAGCAATCAAAGGCATGATGAGGATGCTCTACTTTATGACCAGGCAGAAGCGGATGCTTGCAGCAAGTCTTATTACCTTCTCCACTCAACACGTCACCTTCCGCCTCGTCTGGGCCCTAACAAACTACAAGCAGGTTCGTCAAGCAGTAGCTGAAGGTAACTGCTGCTTTGGAACAATAGACACCTGGCTCCTGTTCAAACTCACCAAAGGTGAGGTGCATGCCACCGACTACTCTAATGCCAGTTCAACAGGAATTTTCGACCCCTATCAGATGTGCTGGAGTGGGTTTCTCAGCTCTCTtgtttctctgcctctctctatTTTTCCCAAAGTAGAAAACACAGGCCAGGACTTTGGTTCCACAGACCCGTCTATCTTCGGAGTCTCCATTCCTATCATGTCAGTGATGGCGGACCAGCAGGCTGCCGTGTTTGGAGAGTGCTGCTTTGACGTTGGTGATGTCAAAATCACCATGGGAACAGGCACCTTCGTGGACATCAACACCGGAAGCAAACCACATACATCTGTAGCAGGTCTGTATCCTCTGGTGGGTTGGAAGATCGGCTCAGAGGTGGTGTATCTGGCGGAGGGCAACGCAGCAGACACAGGCACTGCCATCAAATGGGCACAGGAGCTGGAGCTCTTCTCCGACGTCCGGGACACCAGCAGCATGGCCTGCAGTGTCAGCGACTCAGATGGAGTGTGTTTCGTTCCTTCCTTCAGTGGTCTGCAGGCTCCTCTGAATGATCCCAAAGCTTGCGCCTCCCTCATGGGCCTCAAACCTACCACCACTAAAAGCCATCTGGTCCGGGCCATTCTGGAGTCTGTCGCCTTCAGGAACAAGCAGCTTTATGACACGATGCTGAGAGAAAACATTCCCATCACAAAGATCAGgGTGGATGGCGGCGTTTCCTCCAACGACTTTGTCATGCAGCTGACTGCAAACCTGTTTGGCAGAAAGGTAGCCAGACCCCAAAACTGCGAAATGTCGTGTCTAGGGGCTGCTTTCGTCGCTGGACTCGGAGTGGGCTTCTGGAAGACCAAGGAAGAGCTGAAGAAGCTGCAGACCACCGACGAGGCCTTCTTGCCCAAAGGAACCCCAAAAAGCGGTGCTCACAGCCCCAGTCAGGAATACATCCCTGTCCTCCAGAGCTGGGAGAGAGCTATCCAACGCTCCATGAATTGGTATAAGCCTTGATACGGGGTGCACACACAAGGAGATCAAGGGCTAGACTAAAGCAGATGGttttttgaagaaaataatGTTGTAAGTAGGGCTATACCGAATAGTTCGAAGCTTCATTCATAACGTTGACATTCAAATTCTAAATCAACTGCGCAGCTTTCATTTTGTGCATGTCTACTCATTCTGTTTAAACACAGTATTTTTCCACAGTTGCAGATACTAATTTAGCTCCATTCATaatattatgaattaatattattattaaacataTTTGTAGAATTAGATTCCTGTGGTGGCTGCGTAGGATTGTTTCCAATAACGCGTTGTTTCTGTCTTAGCATAATGTTGCTATTTTTATGCCCTTATTGGATTAGCCTGCTGCCTACATGAGTGTACGTTGACAAAACTAACGAGCTTTAttcattagttgatttaataaaaaaaaaaaaaagacatttattcCAACAAATTATCTTATTCAAAAAGAAATGTAGGGT

Function

symbol description
gk5 Predicted to enable glycerol kinase activity. Predicted to be involved in several processes, including glycerol metabolic process; glycerol-3-phosphate biosynthetic process; and triglyceride metabolic process. Predicted to act upstream of or within carbohydrate metabolic process. Predicted to be active in mitochondrion. Orthologous to human GK5 (glycerol kinase 5).

NR:

description
unnamed protein product

GO:

id name namespace
GO:0005975 carbohydrate metabolic process biological_process
GO:0016310 phosphorylation biological_process
GO:0016773 phosphotransferase activity, alcohol group as acceptor molecular_function
GO:0016301 kinase activity molecular_function

KEGG:

id description
K19583 GK5; putative glycerol kinase 5

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815267.1 True 2072 mRNA 0.48 16 33273117 33285466

Neighbor

gene id symbol gene type direction distance location
LOC120568455 NA coding upstream 92529 33126780 ~ 33180588 (+)
LOC120567698 LOC107098800,LOC105889457,LOC102791798 coding upstream 146317 33075783 ~ 33126800 (+)
apol1 LOC106928621,LOC103148595,LOC106953189,LOC103370244 coding upstream 203064 33051005 ~ 33070053 (+)
parp2 parp2 coding upstream 299360 32953276 ~ 32973757 (+)
sdr39u1 sdr39u1 coding upstream 327731 32941206 ~ 32945386 (+)
atp1b3a atp1b3,LOC104945299,LOC103356916 coding downstream 6722 33292188 ~ 33298786 (+)
stk25b stk25 coding downstream 71041 33356507 ~ 33365322 (+)
trnap-ugg_4 NA coding downstream 116785 33402251 ~ 33402322 (+)
LOC120568799 LOC102786249,LOC100700331 coding downstream 123222 33408688 ~ 33410016 (+)
cldn18 NA coding downstream 128609 33414075 ~ 33419694 (+)
G119763 NA non-coding upstream 3915 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 79918 33192587 ~ 33193199 (+)
G119733 NA non-coding upstream 87225 33181456 ~ 33185892 (+)
G119640 NA non-coding upstream 375099 32897747 ~ 32898018 (+)
G119639 NA non-coding upstream 375649 32897115 ~ 32897468 (+)
G119767 NA non-coding downstream 4864 33290330 ~ 33290580 (+)
G119901 NA non-coding downstream 252706 33538172 ~ 33562071 (+)
G119922 NA non-coding downstream 312407 33597873 ~ 33598657 (+)
LOC120569016 NA non-coding downstream 575972 33861438 ~ 33866996 (+)
LOC120569017 NA non-coding downstream 581929 33867395 ~ 33870784 (+)
LOC120568463 NA other upstream 107017 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 224036 32988817 ~ 33049081 (+)
G119585 NA other upstream 491646 32780988 ~ 32781471 (+)
G119584 vangl2,LOC102795188 other upstream 497435 32775074 ~ 32775682 (+)
G119582 vangl2,LOC103137974 other upstream 503265 32768707 ~ 32769852 (+)
G119769 grk7,LOC106528614,LOC104920904 other downstream 19356 33304822 ~ 33307864 (+)
pkn2a pkn2 other downstream 191870 33477336 ~ 33515424 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 525502 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 573076 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 669700 33955166 ~ 33957504 (+)

Expression


Co-expression Network