LOC120568084


Basic Information

Item Value
gene id LOC120568084
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28185959 ~ 28188829 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815284.1
AGAGAAATTCAGAACATGTTGTTTGTTTGGCAGCTATAGATTTAGAAAGACATAATGTTTTTTAATTGATAAAGGCTACCTCCACTGATGGCTTCATCCAATCCAAGACTATGACTCCATAGAAAGAGCTAAGAAACTGGACTGCATGTGCACCCAGAAGGTGACCTGCTGTTACAGGACTGTGCCTTGTGGCTTTACAAGGAGTCCCATTTTGTTTGAAGTTGGTCTTTTACTGCTTGTTCATCCTCAGTGTGCTAATGAGCTCGTCCACGTCTCAACAGAAAATGCATGAGGGGTGGAGTCAAGCCTACTCGCAGCTCAGTGGCCAATGGAAGGGCCCCGGTATTAACAGCAGTATTTATGAACAGTTATGTTGTGCAGTGGATTAGAACAGGACTGGGTGAGATGCAACAACAGTTGCAGATGTCCAGGATGATTTCCCAGGTGTCCCTGTTGAGGGCACTATGCTATGTGCTATTGATGCCAGGTTTGCTAGAAGCAACATCTCTGATGAAAGTAAAGAATCCTGGAGGAAATCCGGTTAACATTGGCTTTGCTCAGGCACATAATTTCTTGACTAATTCTCGACCTAAGAGGAACATTGACCCAAAGTGGTACAGAGGCACTCCTGATTTCCAGTCCTACTACCGATACTACAACAGTATTGGGCACATTGAAGGGCTCTACGAGATCGACAGGATCAGGATGTTGTATCAGCAGATGCGTCACTTGGAGTTGACCTATGGCCCGGATGCCTCCAGTTACCAAAGTGTTATGGGTGTACTGACTACCACCGCAGCACCATCTACTACCTCTACTACCACTCAgcctcctccccctcccaccACCCCTGCTCCTACACCCGACCCTCTGGAGAAAGCCCAGAGAGTCTATCTGTGTAACCCCAAAGATCCACTGTGCAAACCTCAGATCGTCTACCTGCCAACGGGGGCTGTTCCGGTACTGTGTGACCCACGAGTCAACCCCGCCTGCAGGCCCAAAACAGGGGAGGAGGTAAAAGCTGCTGCTCTTCCCCAACTACCCCCGGCTCCTCCTGCTCCCAAAAAGTCTGTCCCGGTCCCCCCTCCTGCTATCACTGTTAAAGCTATGGAGTACGACTGTGACCCATACTGGGACCCTGACTGCCTCATCGATCACCCTCCCCGCCCCATCCAGGAAACTACCACGCCAGAGGCCCCCACTGAAGAGAAagtagagaaagaggaagtagCAAAAGCCGAAGAAAGTGTCCCTGAAGCACCAGCCACCCAGAAAGCCCCTTACTTTGACCCTTATGATTTCACACGTGACCTGTATGACCCCTTTCGTTATGCCGATCCAGCTCCCGAACCAGAGTAAAAACAAATGAGAACCTTCTATGCAGCATAAGACTACCACATTAAATCACAAGACCAAACCAAGGCAGGACTGTGAGCAAATCCACGTTAAAAACAAAGGCTACAATTCAAATCATGCAAATGATCCAATGTTGTACAGGACAGACATGTAGACAATGCTTTTACAGTATGCTCGGTTTTTCCACATGAAAAACCACACTTTGACTCATCTTTTCATGGGTGTTCATAAGAAATGCACAAACAATTTTGTATTGAATAAAATcaatagaaaaagaagaagaattgaTTGACTACTGGTAATAAATATGTgtgaattta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815284.1 True 1676 mRNA 0.47 5 28185959 28188829

Neighbor

gene id symbol gene type direction distance location
LOC120568081 LOC103372819,LOC102300262,LOC102201271,LOC101469517,LOC100690967 coding downstream 620 28169960 ~ 28185339 (-)
LOC120567660 NA coding downstream 51755 28104455 ~ 28134204 (-)
LOC120567656 LOC103372825,LOC100689894,LOC106526166,LOC108239540 coding downstream 108444 28042117 ~ 28077515 (-)
LOC120567657 LOC103372265,LOC100712512,LOC102781040,LOC102296248,LOC101472093,LOC102204333 coding downstream 144000 28028019 ~ 28041959 (-)
LOC120568371 NA coding downstream 465807 27717398 ~ 27720152 (-)
LOC120568085 ap2m1,ap2m1a,LOC108267679 coding upstream 17889 28206718 ~ 28221404 (-)
LOC120568087 dvl3,LOC103366747,LOC101468147,LOC100700965 coding upstream 33051 28221880 ~ 28238517 (-)
copb2 copb2,LOC101157089 coding upstream 50661 28239490 ~ 28249087 (-)
LOC120567676 nmnat3,LOC102233219 coding upstream 61804 28250633 ~ 28270656 (-)
rbp1.1 rbp1,LOC107990174,LOC104933927 coding upstream 66416 28255245 ~ 28259903 (-)
G118613 NA non-coding downstream 40925 28144428 ~ 28145034 (-)
G118608 LOC103372824 non-coding downstream 86149 28095023 ~ 28099810 (-)
G118504 NA non-coding downstream 521247 27627886 ~ 27664712 (-)
G118482 NA non-coding downstream 576265 27578968 ~ 27609694 (-)
G118632 pcyt1a,LOC104957745,LOC107091881,LOC103040438 non-coding upstream 11308 28200137 ~ 28200551 (-)
G118636 NA non-coding upstream 16882 28205711 ~ 28206241 (-)
G118668 NA non-coding upstream 282138 28470967 ~ 28473620 (-)
G118671 NA non-coding upstream 292810 28481639 ~ 28481897 (-)
G118678 NA non-coding upstream 467832 28656661 ~ 28657022 (-)
metap1d metap1d,LOC102783095 other downstream 33189 28146271 ~ 28152770 (-)
G118524 NA other downstream 467200 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 510599 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 1361389 26819838 ~ 26824570 (-)
G118175 NA other downstream 1520007 26661621 ~ 26665952 (-)
G118764 NA other upstream 797262 28986091 ~ 28986319 (-)
G118856 NA other upstream 1231550 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 1447274 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 2252060 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 2675417 30864246 ~ 30876111 (-)

Expression


Co-expression Network