LOC120568087 (dvl3,LOC103366747,LOC101468147,LOC100700965)


Basic Information

Item Value
gene id LOC120568087
gene name dvl3,LOC103366747,LOC101468147,LOC100700965
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28221880 ~ 28238517 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815290.1
tctcctatGGATGGCGCCCCTCCGGGACAGGCTTGGATGATTTTGTGAAGGTTCGTGTGCAACAAAGTACTACCGAGCTTGGCAGCTAGCGAGAAGAGAAACCCGACCCCTCAGAGATTGTTTATCTTTACTGCGTTTTCAAAcagtttttcagttatttctaaGCTTTCAGCGGCACATTGGAAGTTTAATACAAACGGGAACTAACGCTGTTCAATACTCGGACGGTGTTAGGTCGCTTTGCGGAGGAGCAAGGTGCTTTTTGTAATAGAAAGGCAGGCGTAACGTTAGCGAGCTGGCGTAAAAAAAGAGAGCACCAGGGCTACGCAGCGAGTCGGTCAGCCAGGGAGAGCCGGGAGGACCACGGCAAAGCCGCCGCCAGCGCCACGGGGAGTCGGGGCCCGAGAGGGAGCCTGCCAGGCCCTCGGCTTGATGCACCCTGCCTGCCTCGCCTTAGCCGCAGTCCGAGATGGGGGAGACCAAAATTATCTACCACCTCGACGACCAGGAGACACCATATCTGGTGAAACTGTCGGTGCCGGCGGACAAAGTCACTCTGGCAGACTTCAAAAATGTCCTCAAGAAACCAAATTGCAAATACTTCTTCAAATCTATGGACGATGACTTCGGGGTGGTAAAGGAGGAAATATCTGACGACAACGCTAAACTGCCCTGTTTTAATGGACGTGTGGTGTCATGGTTGGTCTCTGGAGACGGggcccacacagacacaggctcAGTGGCAGACAGTATAGAGCCGGCACCCCCTTTGGAGAGGACCGGGGGCATTGGAGACTCAAGACCACCTTCTTATCATGGGAAAGCAGCAAGCGGTCGGGACAGTTTGGACAACGACACAGAGACTGGCTCCATGGTGTcacaaaggagagagagggagaggccgCGACGGAAACACGCCAACGACCATGGTGGAAGGCAGAACGGCTACTCGTCGCGCGCAGCGGGACGTGGGGGCCCCGAGTACGACAGCTGCTCGTCCTTCATGAGCAGCGAGCTGGAGTCGACTTCCTGTTTTGATTCGGAGGATGACGACGCAACCAGCAGATTTAGCAGCTCCACCGAGCAGAGCTCCTCTCGTCTAATGAGACGCCACCGCCGTCGCCGACGGAAACCTAAGGCCTCCAATATAGACAGGTCTTCGTCATTCAGCAGCATCACAGACTCCACCATGTCTCTGAACATCATCACTGTCACTCTCAACATGGAGAAGTACAACTTCTTGGGCATCAGTATCGTGGGTCAGAGTAACGAGAGGGGAGATGGAGGAATCTACATCGGCTCTATCATGAAGGGAGGAGCTGTGGCTGCAGATGGACGCATAGAGCCTGGGGACATGCtgttgcagGTGAACGACATAAACTTTGAGAACATGAGCAATGACGATGCCGTTCGAGTACTGAGGGACATAGTGCACAAGCCGGGCCCCATAACACTGACTGTGGCCAAGTGCTGGGACCCAAACCCCCGGAGCTGCTTCGCTCTGCCCAGGAGTGAGCCAATCCGGCCCATTGACCCAGCTGCATGGGTGTCCCACACGGCGGCTATGACCGGGGTATACCCTGCGTATGGCATGAGCCCTTCCATGAGCACCGTCACCTCCACCAGCTCCTCCATCAGCAGCTCTATCCCTGAGACTGAACGATTCGATGACTTCCACCTCTCCATCCACAGCGACATGGCAACAGTTGCTAAGGCCATGGCCTGCCCAGAGTCAGGTCTGGAGGTGCGGGACAGGATGTGGCTCAAGATTACCATCGCTAACGCCTTTATCGGTTCTGATGTGGTGGACTGGCTCTTCCATCACGTGGAAGGCTTTTCAGATCGGCGAGAAGCTCGCAAATACGCCAGCAACCTGCTGAAGGCCGGCTACATCCGACACACCGTCAACAAGATCACCTTCTCTGAACAGTGCTACTACGTCTTCGGAGACCTCTGTGGCAaCATGACCCATCTGTCTCTCCATGACCACGATGGTTCCAGTGGGGGTGCCTCAGATCAGGACACTCTCCCCCCTCTGCCCCATCCCGGGTCGGCCCCCTGGCCCATGACGCTGCCCTACCAGTTCCCCATTCCACACCCATACGACATGCAACAGCCCTTCCATGGTGGACCAGGCGCCGGCAGTGCAGGAAGCCAGCACAGCGGAAGCAGTGGCTCCAACTGCAGTAAGAATGAGGGGCGGAAGTCCGGCGGCAGTGGCAGCGAAACGGAGATCCGGAGCCACCGAGCTCCAAGCGAGCGCTCGGTGGCTCCCCCTAGTGAACGAAGCGTCCGTAGCTCTGTCAGCCACCGCAGCGCCAACTCCCACTCGATAGCCTACGGTCCGGGCCTCGTCTATGGCCCCCCTGGCCTGCCCCCCCAGCCCCCACATCTGTCTACAGCTGCACCTGGCGCCCCACCAGGCAGAGAGCTCTCCTCTGTGCCCCCTGAGCTCAATGCCTCACGCCAGTCTCTGCGCATGGCGGTGGGCAACGCTGGAGAATTCTTTGTTGATGTGATGTAACGCAGGTCATAGGCCGATAACAAAGTAGCGGATTTGGCTTTCTCGTGTCATTATAACACTGAGAAGGACAGCATGACGggacaggagggagggaaggtTGCAAAAAGCTGTATCCCAAGGTCTTGATTCCACTCTCCTACAAGAAGAAATGCAACCAACCGGGTTGTGTATGTTGAGAGAAAGTGTTCCTCCTCCCTTGTGCTTTTCTTCCTAGTAGTAGTGGCCATACTTTCTTCAGTGAAGAAACCCCCTCGCTCAAGATGGAACCAAAGCGCCTTTCTCAGTTTCCGCTCCTCAAGTGGGGAAGAGTTTGAGTAAGGACaaagagcaagagagggagggaggcggTGGAAACAGAACAGCTGGGGAAGATGACTCAGCGCTTTTCTACATGGATGTTTTTCATTTGTTCTTCTCTtcactcttccctcctctctgcCTCCCTTATCTAACATTCTCTGTCCTCCCCCACCCCTGTTCACATCAAAACTGAGAGAAAGAAGCCTCTTCCCTCCTTacgtttttttcttcaattttccCACTTCCTGACCTcttaacatgaaaaaaaaaacctaaaagaaagctgaaatgatcactaactGTTAACCTTATTcagactttttaaatgtttgcttgacttcagagagaaagaaatggaaaaatgtgtatGTAGTGCAAGAGAAATGCAGTCCTTACTGTAAGAATGCATTTGTTTAATTATATACGTAGTTGGTCACAactagttacatttttcaacgCTAAACATGAGCATCCAGCTTCAAGAGTCATTTTTACACTACATAACTGCATTTTCATCTGTTAACCAGAGCATTTTCAGACTCTGTCTTGTGATAATGTATAGTGGGGAAAACAATTTCCTACCATGTCTTTCACACTACTCTTTTATCAAGgaaaaaatgtctttttatttataaatatagtTTTATGACTTAACTTTG

Function

symbol description
dvl3 Enables beta-catenin binding activity; enzyme binding activity; and frizzled binding activity. Involved in several processes, including Wnt signaling pathway; positive regulation of nitrogen compound metabolic process; and protein stabilization. Located in chromatin and cytosol. Implicated in autosomal dominant Robinow syndrome 3.

NR:

description
PREDICTED: segment polarity protein dishevelled homolog DVL-3-like

GO:

id name namespace
GO:0036342 post-anal tail morphogenesis biological_process
GO:0035556 intracellular signal transduction biological_process
GO:0007275 multicellular organism development biological_process
GO:0060028 convergent extension involved in axis elongation biological_process
GO:0016055 Wnt signaling pathway biological_process
GO:0005819 spindle cellular_component
GO:0005938 cell cortex cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG:

id description
K02353 DVL; segment polarity protein dishevelled

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815290.1 True 3483 mRNA 0.53 15 28221880 28238517

Neighbor

gene id symbol gene type direction distance location
LOC120568085 ap2m1,ap2m1a,LOC108267679 coding downstream 476 28206718 ~ 28221404 (-)
LOC120568084 NA coding downstream 33051 28185959 ~ 28188829 (-)
LOC120568081 LOC103372819,LOC102300262,LOC102201271,LOC101469517,LOC100690967 coding downstream 36541 28169960 ~ 28185339 (-)
LOC120567660 NA coding downstream 87676 28104455 ~ 28134204 (-)
LOC120567656 LOC103372825,LOC100689894,LOC106526166,LOC108239540 coding downstream 144365 28042117 ~ 28077515 (-)
copb2 copb2,LOC101157089 coding upstream 973 28239490 ~ 28249087 (-)
LOC120567676 nmnat3,LOC102233219 coding upstream 12116 28250633 ~ 28270656 (-)
rbp1.1 rbp1,LOC107990174,LOC104933927 coding upstream 16728 28255245 ~ 28259903 (-)
LOC120568715 LOC104944837,LOC103366837,LOC102237248,LOC102197332 coding upstream 260430 28498947 ~ 28590144 (-)
LOC120568207 LOC103366836,LOC108239510,LOC100692307,LOC102787733 coding upstream 354821 28593338 ~ 28613393 (-)
G118636 NA non-coding downstream 15639 28205711 ~ 28206241 (-)
G118632 pcyt1a,LOC104957745,LOC107091881,LOC103040438 non-coding downstream 21329 28200137 ~ 28200551 (-)
G118613 NA non-coding downstream 76846 28144428 ~ 28145034 (-)
G118608 LOC103372824 non-coding downstream 122070 28095023 ~ 28099810 (-)
G118504 NA non-coding downstream 557168 27627886 ~ 27664712 (-)
G118668 NA non-coding upstream 232450 28470967 ~ 28473620 (-)
G118671 NA non-coding upstream 243122 28481639 ~ 28481897 (-)
G118678 NA non-coding upstream 418144 28656661 ~ 28657022 (-)
LOC120568122 NA non-coding upstream 459577 28698094 ~ 28699197 (-)
G118698 NA non-coding upstream 504443 28742960 ~ 28743235 (-)
metap1d metap1d,LOC102783095 other downstream 69110 28146271 ~ 28152770 (-)
G118524 NA other downstream 503121 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 546520 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 1397310 26819838 ~ 26824570 (-)
G118175 NA other downstream 1555928 26661621 ~ 26665952 (-)
G118764 NA other upstream 747574 28986091 ~ 28986319 (-)
G118856 NA other upstream 1181862 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 1397586 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 2202372 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 2625729 30864246 ~ 30876111 (-)

Expression


Co-expression Network