lrrc8da (LOC103355795)


Basic Information

Item Value
gene id lrrc8da
gene name LOC103355795
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 33533074 ~ 33549879 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815354.1
CAGGCGGTGTCCTCAGGAAGTTGGCATAATGTCATCCTCCAATGAGAAGCGCCCATAATACTCTCAACTGCGGTCTGTGTACGgctcatagactgtaaaataaGGTACGGCTCCATATTGGATCGGTCTTTTCTTAGAAATACATTGGCACTGGAGCTCTGCTGCGTATAGTCTAACGTACGGCCAGGCAGCCAGGCAGGCAGCCGGCTCTGCTTCCCGGGGCTCAGGTGTGAGGGATGTAGCTGACAACCGGCATTGTCACGAACAAATGTTCCTGAGAGCTGTGTATCACACAGCGGCGTCATTCCCACAGTTTTGAACGGGGCTGAGAAATTAGGTTAGAGGCGCACCTGGAGAACGGAGTGAAAAGTGGCATGCGGGCGGAGGAAGAATTAATTGGATTGAGATAACGCCACACGGGCATGATGTTCACGCTATCTGAGATTGCATCCTTGAATGACATCCAGCCGACGTACCGCATCCTAAAGCCATGGTGGGACGTCTTCATGGACTACCTGGGGCTGGTCATGCTGATGCTGGCCATATTCGCCATGACCATGCAGATCACCAAGGACCAGGTGGCCTGCCTTCCGTGTCTGGATGAGGCGGAGGAGGCCACGGCAGGGGCTATGTCTAACTCGTTCACGCAGCAGAGCACACAGAAAGCAGCTTTCTCAGCAGCCACCGGAGCCCCTCTGGCAACCACCGTCCCCCTAGTCTCTAAGGACTTACCAGACGACGTTGTCCACGAGATCCATgtcacacaccaacacactgcTGTGGCGGCAGAGAAATATGTCAATCAACCTGAACCCACAGGGATCAGGACCAATCTGGACTTTCAACAATATGTCTTCATCAACCAAATATGTTACCATGTTGCCTTGCCCTGGTATTCCAAGTACTTTCCCTACCTTGCCCTCATCCACACCATTGTTCTCATGGTCAGTAGCAATTTTTGGTTCAAATACCCCAAAACGAGCTCCAAGATTGAGCATTTTGTTTCAATTCTAGGTAGATGTTTTGAGTCTCCCTGGACTACGAAGGCTTTGTCTGAAACCGCTTGTGAGGACTCTGAGGAGAACAAACAGCGGTTGACCGGCACCACCTTAGCACCAAAGCAGGTCTCTTTAGAAGGGAAGGATGAAAGCTCAAATGTCAGCCCAACCACACCCATGCTCGGGCTGAAGTTCTCTGCAGATAAGCCCATCGCAGAGGTCCCAAGTAGCATGACAATCCTGGACAAAAAAGATGGGGAGCAGGCCAAAGCCCTGTTCGAGAAAGTCAGAAAATTCCGAGCTCATGTGGAAGACAGCGATTTCATCTACAAGCTTTATGTAGCGCAGACCGTTGTCAAAACGGTCAAGTTTATTTTGATATTATCATACACTTCGACCTTTTTGGCTGAAATAAATTTCAAGCACAATTGTGAGCCTGATATCAAACAGCTAATAGGATACACAAAGTTCTTATGTACGCACAACATGGCTTTCATGCTAAAAAAGCTGCTTGTTAGCTACATGACTTTGATTTTGATCTACGGGATGGCTTGCCTGTACTCTCTCTTCTGGGTGTTCCGCCGGCCTCTGAAAGAATACTCATTCGAGAAGGTCCGGGAAGAGAGCAGCTTTAGTGACATTCCTGATGTCAAAAACGACTTTGCATTCCTCTTACACATGGTTGACCAATATGACCAGCTCTACTCCAAGCGCTTTGGCGTCTTCTTGTCCGAGGTCAGTGAAAACAAGCTCAGAGAGATCAGCCTTAATCACGAGTGGACCTTTGAAAAACTAAGGCAGCTTGTGACCCGTAACGCCTCGGACCAGCAAGAGCTGCACCTTTTCATGCTCTCTGGTATTCCGAATGCAGTGTTCGACCTCACAGACTTGGAAGTGCTGAAACTGGAGCTGATTCCTGAGGTGAGGTTCTCGGCAAAGGTCTCCCAAATGACCAGCCTGGTGGAGCTGCATCTCTGCCACTGTCCGGCCAAAGTAgagcagacagcgtttgctttCCTGCGTGACCATCTTCGCTGCCTTCATGTCAAGTTCACTGATGTTGCCGAGATCCCAGCATGGGTGTATTTGCTGAGGAGTTTGAGGGAGCTCAACCTAATCGGCAActtgagctcagaaaataacaaaatgatTGGTCTAGAGTCCATGCGAGACTTGAGGCATTTAAAGACATTATGCTTGAAGAGCAACCTCACAAAAATGCCCACCAACATCACAGAGCTGTCGCCACATCTGATTAAGCTAGTGGTGCACAATGACGGTACCAAACTTGTGGTACTAAATAgtctgaaaaaaatgacaaatataaTTGATCTGGAACTGCACACGTGTGAACTGGAGAGGATTCCCCACGCTATTTTCAGCTTGACCAACCTACAGGAACTTGACCTGAAATCTAACAACATCCGAACCATCGAGGAGATCATCAGCTTCCAGCACCTCAAGAGGCTGACGTGCCTTAAACTGTGGCACAACAAAATCATCACCATCCCATCCTCCATCGGCCAGATCAAGTCTCTGGAGTCTCTCCACCTCTCCCACAATAAACTGGAGTCCCTGCCTCCGGCCTTGTTCATGCTGCCTAAACTGCGGCACTTGGACGTGGGCCACAACTCCATCACAGTGCTCCCTCTGGATGTGGGTCTCCTCCACAATCTCCAGCACTTGGCCATCAACTCCAACAAGCTGGAGGTGCTGCCCAAGCctctgttcagatgcaccaagcTCAAGGTGCTGTGTCTGGGGAACAATGCGCTCACTGTGCTGCCAGAGACCGTGGGCCAACTGGTCCAGCTCACTCAGCTGGAGCTGAGAGGGAACTGTCTGGACAGACTGCCCGCCCAGCTAGGAAACTGTCGCCTGCTGCGCAAAAGCGGCCTGGTCGTGGAGGACCATCTCTTTGACGCGTTGCCGGTGGAGGTTAAGGAGAGCATTAGCCGAGAGAACAACACTTCCTTTACGAGTGGCTTatagcacagaaaaaaaacactggttcATGAGTTCATGACAATCCTGCTTAATGGATGTAAGAGTAGACTCTTTATTATTGTAATATCCCTAAAAATGAATGCATTTCTCTTGATTATTTTAATGAGTTGTCTTAGTTGCTCATGTATTAAAATGGTATATATTGCTTTCCTTGTTGCTGAGTATCTATTATAGTTCAGCAATGTTTTGGCTTTTCATAGCTTTGAGTAACAAAACATTAGAAATTTAGCTTCTTTATGTCCTACTCTATAGACCAAAACTGATTGCTCCAATGACACATTATGTAGATTTGTCATTGTTGTTTTAGGTACTCAGGTATAATTGTAACCATGGGGAACAATCTTTTTTGCCTTAACTGCTGctattgcattttcttttattttattttttttacagtgagggctttcacaaacaaaaggccaaaaatgaatatttaatgttttcttGTCAGTTTTACATACAGTTACTATCCACAGAGCAATTGCATGCTACGGAAGAGGACACAATGCAACGCTTCTATGTAGTTTTCAATTTTTGAAATCGTAAAACCTTTGTTTTCCTCAATGTCCCAACAAAATGACATTAGAGTTGTAAAACTCAGGTAGAGGCTACTCCCCATAAATGAACCTTTACCTGACTGTTGTAGAGATTGTATACTAATTAATTAAGCCTATAACAATTAATTTGCACATTGAAAACTTAATAATTTAAAGATCACTGAATGTCCTTTTGTAATAAACTGTCCCGAGAAGACCGACTTGAGCTGATAAAAGGGAACTctggtttttttgttttaaatcctGCTTTAAAATTTGAAATGTGGAATAAAACTGCTCACAGACTGATTATTTAACATGTCAGAATTGTGTGATGACCTTCATTCTTCTTAATGTATTTCTGTGTAGGTCTATATTATATACCCAGTATGTCTTATTTAGAGCTGCTGTACCACCTTTGTTATCCTATGCTCAAAGTTCACAACTTTATGGCACAATAAAAcaagattttagataaatgatTATATATTCATCTACTTCCAGCCCACTCCAATGAAACAAGCCTCTGTCTAAACAGTTATTACAATAAAGGCAATTAATCATC
>XM_039815355.1
atggcgctaacaaACAACATGCAATGATGTTCACGCTATCTGAGATTGCATCCTTGAATGACATCCAGCCGACGTACCGCATCCTAAAGCCATGGTGGGACGTCTTCATGGACTACCTGGGGCTGGTCATGCTGATGCTGGCCATATTCGCCATGACCATGCAGATCACCAAGGACCAGGTGGCCTGCCTTCCGTGTCTGGATGAGGCGGAGGAGGCCACGGCAGGGGCTATGTCTAACTCGTTCACGCAGCAGAGCACACAGAAAGCAGCTTTCTCAGCAGCCACCGGAGCCCCTCTGGCAACCACCGTCCCCCTAGTCTCTAAGGACTTACCAGACGACGTTGTCCACGAGATCCATgtcacacaccaacacactgcTGTGGCGGCAGAGAAATATGTCAATCAACCTGAACCCACAGGGATCAGGACCAATCTGGACTTTCAACAATATGTCTTCATCAACCAAATATGTTACCATGTTGCCTTGCCCTGGTATTCCAAGTACTTTCCCTACCTTGCCCTCATCCACACCATTGTTCTCATGGTCAGTAGCAATTTTTGGTTCAAATACCCCAAAACGAGCTCCAAGATTGAGCATTTTGTTTCAATTCTAGGTAGATGTTTTGAGTCTCCCTGGACTACGAAGGCTTTGTCTGAAACCGCTTGTGAGGACTCTGAGGAGAACAAACAGCGGTTGACCGGCACCACCTTAGCACCAAAGCAGGTCTCTTTAGAAGGGAAGGATGAAAGCTCAAATGTCAGCCCAACCACACCCATGCTCGGGCTGAAGTTCTCTGCAGATAAGCCCATCGCAGAGGTCCCAAGTAGCATGACAATCCTGGACAAAAAAGATGGGGAGCAGGCCAAAGCCCTGTTCGAGAAAGTCAGAAAATTCCGAGCTCATGTGGAAGACAGCGATTTCATCTACAAGCTTTATGTAGCGCAGACCGTTGTCAAAACGGTCAAGTTTATTTTGATATTATCATACACTTCGACCTTTTTGGCTGAAATAAATTTCAAGCACAATTGTGAGCCTGATATCAAACAGCTAATAGGATACACAAAGTTCTTATGTACGCACAACATGGCTTTCATGCTAAAAAAGCTGCTTGTTAGCTACATGACTTTGATTTTGATCTACGGGATGGCTTGCCTGTACTCTCTCTTCTGGGTGTTCCGCCGGCCTCTGAAAGAATACTCATTCGAGAAGGTCCGGGAAGAGAGCAGCTTTAGTGACATTCCTGATGTCAAAAACGACTTTGCATTCCTCTTACACATGGTTGACCAATATGACCAGCTCTACTCCAAGCGCTTTGGCGTCTTCTTGTCCGAGGTCAGTGAAAACAAGCTCAGAGAGATCAGCCTTAATCACGAGTGGACCTTTGAAAAACTAAGGCAGCTTGTGACCCGTAACGCCTCGGACCAGCAAGAGCTGCACCTTTTCATGCTCTCTGGTATTCCGAATGCAGTGTTCGACCTCACAGACTTGGAAGTGCTGAAACTGGAGCTGATTCCTGAGGTGAGGTTCTCGGCAAAGGTCTCCCAAATGACCAGCCTGGTGGAGCTGCATCTCTGCCACTGTCCGGCCAAAGTAgagcagacagcgtttgctttCCTGCGTGACCATCTTCGCTGCCTTCATGTCAAGTTCACTGATGTTGCCGAGATCCCAGCATGGGTGTATTTGCTGAGGAGTTTGAGGGAGCTCAACCTAATCGGCAActtgagctcagaaaataacaaaatgatTGGTCTAGAGTCCATGCGAGACTTGAGGCATTTAAAGACATTATGCTTGAAGAGCAACCTCACAAAAATGCCCACCAACATCACAGAGCTGTCGCCACATCTGATTAAGCTAGTGGTGCACAATGACGGTACCAAACTTGTGGTACTAAATAgtctgaaaaaaatgacaaatataaTTGATCTGGAACTGCACACGTGTGAACTGGAGAGGATTCCCCACGCTATTTTCAGCTTGACCAACCTACAGGAACTTGACCTGAAATCTAACAACATCCGAACCATCGAGGAGATCATCAGCTTCCAGCACCTCAAGAGGCTGACGTGCCTTAAACTGTGGCACAACAAAATCATCACCATCCCATCCTCCATCGGCCAGATCAAGTCTCTGGAGTCTCTCCACCTCTCCCACAATAAACTGGAGTCCCTGCCTCCGGCCTTGTTCATGCTGCCTAAACTGCGGCACTTGGACGTGGGCCACAACTCCATCACAGTGCTCCCTCTGGATGTGGGTCTCCTCCACAATCTCCAGCACTTGGCCATCAACTCCAACAAGCTGGAGGTGCTGCCCAAGCctctgttcagatgcaccaagcTCAAGGTGCTGTGTCTGGGGAACAATGCGCTCACTGTGCTGCCAGAGACCGTGGGCCAACTGGTCCAGCTCACTCAGCTGGAGCTGAGAGGGAACTGTCTGGACAGACTGCCCGCCCAGCTAGGAAACTGTCGCCTGCTGCGCAAAAGCGGCCTGGTCGTGGAGGACCATCTCTTTGACGCGTTGCCGGTGGAGGTTAAGGAGAGCATTAGCCGAGAGAACAACACTTCCTTTACGAGTGGCTTatagcacagaaaaaaaacactggttcATGAGTTCATGACAATCCTGCTTAATGGATGTAAGAGTAGACTCTTTATTATTGTAATATCCCTAAAAATGAATGCATTTCTCTTGATTATTTTAATGAGTTGTCTTAGTTGCTCATGTATTAAAATGGTATATATTGCTTTCCTTGTTGCTGAGTATCTATTATAGTTCAGCAATGTTTTGGCTTTTCATAGCTTTGAGTAACAAAACATTAGAAATTTAGCTTCTTTATGTCCTACTCTATAGACCAAAACTGATTGCTCCAATGACACATTATGTAGATTTGTCATTGTTGTTTTAGGTACTCAGGTATAATTGTAACCATGGGGAACAATCTTTTTTGCCTTAACTGCTGctattgcattttcttttattttattttttttacagtgagggctttcacaaacaaaaggccaaaaatgaatatttaatgttttcttGTCAGTTTTACATACAGTTACTATCCACAGAGCAATTGCATGCTACGGAAGAGGACACAATGCAACGCTTCTATGTAGTTTTCAATTTTTGAAATCGTAAAACCTTTGTTTTCCTCAATGTCCCAACAAAATGACATTAGAGTTGTAAAACTCAGGTAGAGGCTACTCCCCATAAATGAACCTTTACCTGACTGTTGTAGAGATTGTATACTAATTAATTAAGCCTATAACAATTAATTTGCACATTGAAAACTTAATAATTTAAAGATCACTGAATGTCCTTTTGTAATAAACTGTCCCGAGAAGACCGACTTGAGCTGATAAAAGGGAACTctggtttttttgttttaaatcctGCTTTAAAATTTGAAATGTGGAATAAAACTGCTCACAGACTGATTATTTAACATGTCAGAATTGTGTGATGACCTTCATTCTTCTTAATGTATTTCTGTGTAGGTCTATATTATATACCCAGTATGTCTTATTTAGAGCTGCTGTACCACCTTTGTTATCCTATGCTCAAAGTTCACAACTTTATGGCACAATAAAAcaagattttagataaatgatTATATATTCATCTACTTCCAGCCCACTCCAATGAAACAAGCCTCTGTCTAAACAGTTATTACAATAAAGGCAATTAATCATC

Function

NR:

description
PREDICTED: leucine-rich repeat-containing protein 8D-like

GO: NA

KEGG:

id description
K22038 LRRC8; volume-regulated anion channel

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815354.1 True 4106 mRNA 0.45 2 33538406 33549879
XM_039815355.1 False 3707 mRNA 0.44 2 33533074 33549879

Neighbor

gene id symbol gene type direction distance location
hs2st1a hs2st1 coding upstream 59457 33434202 ~ 33473617 (+)
cldn18 NA coding upstream 113380 33414075 ~ 33419694 (+)
LOC120568799 LOC102786249,LOC100700331 coding upstream 123058 33408688 ~ 33410016 (+)
trnap-ugg_4 NA coding upstream 130752 33402251 ~ 33402322 (+)
stk25b stk25 coding upstream 167752 33356507 ~ 33365322 (+)
LOC120569066 NA coding downstream 1753 33551632 ~ 33559908 (+)
hfm1 hfm1 coding downstream 24285 33574164 ~ 33601451 (+)
cdc7 cdc7 coding downstream 52184 33602063 ~ 33610603 (+)
rpap2 NA coding downstream 72509 33622388 ~ 33643583 (+)
rpl5a LOC104920939,LOC100700425,LOC103149531,LOC106904255,LOC106958298,LOC107396374 coding downstream 107920 33657799 ~ 33661745 (+)
G119767 NA non-coding upstream 242494 33290330 ~ 33290580 (+)
G119763 NA non-coding upstream 263872 33268370 ~ 33269202 (+)
G119744 NA non-coding upstream 339875 33192587 ~ 33193199 (+)
G119733 NA non-coding upstream 347182 33181456 ~ 33185892 (+)
G119640 NA non-coding upstream 635056 32897747 ~ 32898018 (+)
G119922 NA non-coding downstream 47994 33597873 ~ 33598657 (+)
LOC120569016 NA non-coding downstream 311559 33861438 ~ 33866996 (+)
LOC120569017 NA non-coding downstream 317516 33867395 ~ 33870784 (+)
G119961 NA non-coding downstream 317890 33867769 ~ 33868000 (+)
G119963 NA non-coding downstream 318507 33868386 ~ 33868686 (+)
pkn2a pkn2 other upstream 17650 33477336 ~ 33515424 (+)
G119769 grk7,LOC106528614,LOC104920904 other upstream 225210 33304822 ~ 33307864 (+)
LOC120568463 NA other upstream 366974 33163916 ~ 33166100 (+)
tep1 LOC104950563,LOC104941471 other upstream 483993 32988817 ~ 33049081 (+)
G119585 NA other upstream 751603 32780988 ~ 32781471 (+)
gng12a gng12,LOC104920945,LOC104956611,LOC103354642 other downstream 261089 33810968 ~ 33851937 (+)
G119957 gadd45a,LOC106598934,LOC106568974 other downstream 308663 33858542 ~ 33859847 (+)
LOC120568585 LOC108244495 other downstream 405287 33955166 ~ 33957504 (+)
mrpl34 NA other downstream 614201 34164080 ~ 34165852 (+)
LOC120568953 dda1,LOC105024194,LOC106568965,LOC104920954 other downstream 617097 34166976 ~ 34172309 (+)

Expression


Co-expression Network