LOC120568118 (LOC104947936,LOC107372586,LOC107373506)


Basic Information

Item Value
gene id LOC120568118
gene name LOC104947936,LOC107372586,LOC107373506
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 28874875 ~ 28876602 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815383.1
AAAATCAGCACTATTGGAACAGACAGCGCTCCTAATATGGTGGCAGCAGGGAGGATACTGCCATTCGAGCATTTGCCCTGTGTTGCGCATGTTGTACAGAGAGCTATTGTAATGTCACTTCGGGAAGGTGGTTTTGATGGTGCACTGGCCAAGTGCCGTAAAGTGGTCGGACATTTCAAACACAGTCCGGCCAACTCAGACGAGCTGAATGTCCAGCAAGCTTCCCTTGGACAAGTTCAGGAGCCACTTGTGCAAGATGTTCCAACACGGTGGAATTCCACCCTTGAGATGATCAAGCGCGTGATGCGCAACAGAGACGCACTGTACACAACGCTGTCTCAGCAGAAGCACAATCTGGCCCTCCCAACAAATGCTGAATATGAGAAGTTGGCAAAGCTAGAGAAACTGCTGGAGCCATGCAGgtACATCACTGAGCTCCTTGGTGGGGATAGGTATGTATCCTGCTCTGTGGTTCTACCTGGCCTGTGCCACCTCCAGCATGTGATGAAGATCTCAGATGATGATCCTGCCTATATTGTGCGATTCAAAGCTGCCTTCACCAAGGACCTCAACCAGCGGAGCGAGAAAATAAACCTGGAATGGCTTAAgGTGGCGACTGCTCTAGATCCAAGATTTAAGGATCTCAAGTGCTTGCCCAGAGCAGAGAGGGAGCCAGTGTGGGCAAAGCTAAGTGAGTTGGTGAAGAGAGAAGAACCTGCTCTGCAGCCACTTGGGGAGAAGAACCCTGAGCCACCCAAGAAGAAAACAGCCCTGCTACTGATGGGATCAGACTCTGAATCAGATGAGGAGACACCAGAAGACAATACTGTGGAGAGGTACAAGGTAGAGCCCAGTGCCAGTCTAGATCAGTGTCCACTGAAGTGGTGGTCGGACCACACTGCTGTCTATGGTAAGATGGCCCACATTGCCCGTAAATACTTGGGGACTCCTGCCACAACTGTCCCATGCGAGAGACTTTTTTCTTTAGCAGGCCATATTGTGCAGAAGAGGAGATCTAGTTTGTCACCAGAAAATGTGAACAAGCTGGTCTGCCTGAGTGACTGGTGGAAGAAGGAGAAATAGAGCTTGGACTGATTGACACAAAGCTACTGACTGTAAAACAGTTCATCACGACCTCTTATGTAGGCCTACAGTTCAAAATTCATGTTTAACTGAATAAACAGTTAGTAAACACAAGTACATCTTGTTGAACATGATTTATTTTCATCACCAATTATCATATTAGAACAGCTTTCCCAAGCAGTTTGTGATGCATTTTGGAAACAGGAGATGAGCCCCTGGTCTAATGCGCCACCTGGCTTGAGAAAC

Function

NR:

description
PREDICTED: uncharacterized protein LOC104947936, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815383.1 True 1329 mRNA 0.48 3 28874875 28876602

Neighbor

gene id symbol gene type direction distance location
LOC120567913 NA coding downstream 213726 28659832 ~ 28661149 (-)
LOC120567677 NA coding downstream 227342 28637052 ~ 28647533 (-)
LOC120568207 LOC103366836,LOC108239510,LOC100692307,LOC102787733 coding downstream 261482 28593338 ~ 28613393 (-)
LOC120568715 LOC104944837,LOC103366837,LOC102237248,LOC102197332 coding downstream 284731 28498947 ~ 28590144 (-)
LOC120567676 nmnat3,LOC102233219 coding downstream 604219 28250633 ~ 28270656 (-)
LOC120568834 NA coding upstream 224408 29101010 ~ 29103793 (-)
LOC120568712 NA coding upstream 410674 29287276 ~ 29292640 (-)
si:ch211-153l6.6 LOC102313061,LOC101473329 coding upstream 676857 29553459 ~ 29586063 (-)
LOC120567685 NA coding upstream 808448 29685050 ~ 29690335 (-)
LOC120567690 NA coding upstream 1093488 29970090 ~ 29974289 (-)
LOC120568120 NA non-coding downstream 72126 28796078 ~ 28802749 (-)
G118700 NA non-coding downstream 118992 28755587 ~ 28755883 (-)
G118698 NA non-coding downstream 131640 28742960 ~ 28743235 (-)
LOC120568122 NA non-coding downstream 175678 28698094 ~ 28699197 (-)
G118678 NA non-coding downstream 217853 28656661 ~ 28657022 (-)
G118732 NA non-coding upstream 15549 28892151 ~ 28893217 (-)
G118739 NA non-coding upstream 49016 28925618 ~ 28925964 (-)
G118755 NA non-coding upstream 57981 28934583 ~ 28961472 (-)
G118756 NA non-coding upstream 65401 28942003 ~ 28944159 (-)
G118761 NA non-coding upstream 97272 28973874 ~ 28974149 (-)
metap1d metap1d,LOC102783095 other downstream 722105 28146271 ~ 28152770 (-)
G118524 NA other downstream 1156116 27713467 ~ 27718759 (-)
LOC120568986 epha4,LOC100711706 other downstream 1199515 27643327 ~ 27675360 (-)
cirbpa cirbp other downstream 2050305 26819838 ~ 26824570 (-)
G118175 NA other downstream 2208923 26661621 ~ 26665952 (-)
G118764 NA other upstream 109489 28986091 ~ 28986319 (-)
G118856 NA other upstream 543777 29420379 ~ 29420652 (-)
LOC120567741 NA other upstream 759501 29636103 ~ 29649792 (-)
LOC120568429 LOC106574020,LOC106613541,LOC103366013 other upstream 1564287 30440889 ~ 30477185 (-)
LOC120568929 NA other upstream 1987644 30864246 ~ 30876111 (-)

Expression


Co-expression Network