LOC120568136


Basic Information

Item Value
gene id LOC120568136
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24997381 ~ 25001782 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815422.1
CAGAGAGGGACGGGCTTCAGGCAGGAGGTCATCACAAACATGGCGTGGAGAGGATGTGTAATGAAATGGGCTAAAACCGAGTTCCTCAGGTCCAACAACACTACTTCAAAAAGCTCCAGACTGAACCCCCACAACCAACAGCGGTGCAGTTTCCGTCGGGAAGCCAAAAGGCCGGATACAAAGAAAGGAAATGTCACCCAAGAAACAAAAGCTTCACCTTCTGAGGCTGGCACACCAGGTCCCCCACCTCCTCCCAAAGTCCCTCGACCGACACTTTTAAAACCCCTGATGTTCACAGTAGGATTTACAGGCTGCTCCTTTGGTGCGGCTGCCATTCTGCAATATGAGACCCTGAAGTCAAGAGTTACGACTGCAAAAGCTGAAGAGGAGTCAGAAAAACTCTTACAGGGGTCTCAGGACATGGTGTACTGGCATGACTGGTGGAACAAACTGTCAGGCTTCCAGCGACAGCTCCTTCTCCTTGTGTCCATGGTAGATGACTTCTGGAGCAGTCTCACAGAGGGACAGAAGACAGTAACCGGCATCATTGCAGTAAATGCTGTAGTTCTGTGTTGCTGGCGTATCCCTTCAATGCAAAGAAGCATGATTAAGTACTTCACGTCCAACCCAGCCTCCAGTGAGTATGCATTCTTGGAGCTTAACACATTTGGATATTTGGGATATTTTAACAGCTGGAACCAGTTGGTTAAATATATGGTATCTATGATGAATTAAGTTTTATGCATGGAAGAAAGAGTGATCTCTCAATTATAATGTGTATTTTCAGGTGTGATTTCCACTATGGTCAGCTACATGTGTAAAACTGCCACTGGACGTCTCCATCCATCATTAGGAGCATCAGGTGCTGTCATGGCAGTACTGGCCGCAGTCTGTGCAAAGGTGCCAGAGGCCAAACTAGGAATAATCTTCCTCCCCATGATCACTTTCACAGCAGGAAGTGCTCTGAAAGTGCTCGTCGCCATAGATACAGCAGGGCTCATACTGGGATGGCGGCTGTTTGACCACGCAGCTCACCTTGGAGGAGCCCTCTTTGGAGTATGGTATGTGGCGTATGGTCACAAACTGATTTGGAGGAAGAGGGAGCCTCTTGTGAAGCTGTGGCATGACATGCGTTCTCCAGGTGCCGGTGGATCCAGGCCAGGAGGTGGGCCTGGGGTCAGTGGTGGTGGAGGACCTGGACCACAATGAGACTCTGCAAGGTCCCTCGGATCCTTTTTGAAAGAACTGGGAGTCCACAGTTACCCCAGGATACGCAAGGACGCTTTTATCCACCGAGAGGGAGTCGGGTGTAATTGTTTATTAAAGAATATAGTTTTTTATCAGGGTTTGTAATGACCATAAGCTGATTGATTTAATGGTATGCAGAGActggaaatgtaaaaaaacaaacaaaagaaaacaggtCAGACCTCACACCTTGTGTTGCAATCCAGAGGTTTACTGTGTAGACTGATACATCGGCAGCCCAAGTAACCCCTTCAAACTACAAAATGGAAATATCATCACTCTCCTACCTCTTACTAATGCATAgatattttaaacttttgttttaaagttagtttttttcctGTTAATATTATTGAAAGCAATTGTATAAGCCTgggcagaaaaaaacagagcGCTGATACGATTCAGTGAATTATTTGCTAACTTCAATGTAATATACAGTCCTGTGGGCTGGTCTTATGTTGCTATTAAAACTGGAGTTTCAACAATCA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0016021 integral component of membrane cellular_component
GO:0004252 serine-type endopeptidase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815422.1 True 1739 mRNA 0.46 9 24997381 25001782

Neighbor

gene id symbol gene type direction distance location
zgc:110366 LOC100711167,LOC101466938,LOC102200702,LOC102788500 coding downstream 4771 24987589 ~ 24992610 (-)
si:ch211-13f8.1 kiaa1614,LOC102789281 coding downstream 32417 24950498 ~ 24964964 (-)
tal1 LOC100710637,LOC101065935,LOC105935913 coding downstream 48058 24943660 ~ 24949323 (-)
ppm1la LOC103365160,LOC100694563,LOC104951467,LOC101471328 coding downstream 63568 24924580 ~ 24933813 (-)
arl14 LOC104951466,LOC103365161 coding downstream 75992 24920430 ~ 24921389 (-)
LOC120568128 col4a3,LOC103359191 coding upstream 53443 25055225 ~ 25085349 (-)
LOC120568225 LOC103359193 coding upstream 112596 25114378 ~ 25135959 (-)
pax3a LOC103356872 coding upstream 893856 25895638 ~ 25917773 (-)
LOC120568965 LOC104919208,LOC101171526,LOC104966176,LOC103396005,LOC101079252 coding upstream 961591 25963373 ~ 25968420 (-)
LOC120568966 LOC104919207,LOC103356876,LOC108245539 coding upstream 970949 25972731 ~ 25988947 (-)
G117718 NA non-coding downstream 104922 24876086 ~ 24892459 (-)
G117716 NA non-coding downstream 128950 24863009 ~ 24868431 (-)
G117616 eif2b3 non-coding downstream 200125 24787583 ~ 24797256 (-)
G117605 NA non-coding downstream 268159 24728871 ~ 24729222 (-)
G117596 plk3 non-coding downstream 310749 24682857 ~ 24686632 (-)
LOC120568137 NA non-coding upstream 21619 25023401 ~ 25048014 (-)
G117786 LOC103359187,LOC104951523,LOC101067506 non-coding upstream 279626 25281408 ~ 25335213 (-)
G117788 NA non-coding upstream 348444 25350226 ~ 25373646 (-)
G117812 NA non-coding upstream 591261 25593043 ~ 25593585 (-)
G117813 NA non-coding upstream 592491 25594273 ~ 25594757 (-)
G117732 NA other downstream 74063 24922203 ~ 24923318 (-)
G117560 NA other downstream 460885 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 1140760 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 1505769 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 1566389 23430366 ~ 23430992 (-)
camk2n1a camk2n2 other upstream 1313988 26315770 ~ 26319595 (-)
G118175 NA other upstream 1659839 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 1818056 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 2641545 27643327 ~ 27675360 (-)
G118524 NA other upstream 2711685 27713467 ~ 27718759 (-)

Expression


Co-expression Network