tmem59 (tmem59)


Basic Information

Item Value
gene id tmem59
gene name tmem59
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 17575306 ~ 17579575 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815472.1
TCCGattaaagaggaagaagagcgTGTTGTTTGTTTAGGTTTTCGCAGACAAAATGGGGACTCTTTCCTCCTTTGTCTGTATGTTGGGACTGTTTGTCCTGCTTGCGTGCACCTCAGCATCTTCAGATGTGTTCGATAGCGTTTTGGGAAACACAGTATCCTGCCATAAGTCATGTGAAATGACATACAGTTTGCACACGTATCCAAGGGAAGAGGAACTCTATGCCTGTCAGAGAGGCTGCCGTCTGTTCTCCATTTGTCAGTTTGTTCGTGACAGCGAAGATCTGAATCAGACCAAATCCGAGTGTGAATCAACCTGTCATGAAGCCTACACCCATTCTGATGAGCAGTATGCATGCAATTTGGGCTGTCAGAATCAGCTTCCATTTGCTGAGCAACGTCATGAGCAGTTGGAGGCCATGATGCCCAGGATTCACCTGCTGTACCCACTGACTCTGGTCAGAGGGTTTTGGGAGGATGTAATGAGTCAGGCACACAGCTTCATCACTTCCACATGGACATTCTACCTCCAGGCTGACGATGGCAGAGTTGTCATTTTCCAGACTGAACCACAAATCAAGTTTTTTTCCCAATTTAAAGTGGAAACCGATGTTAAAGAGGAACCACAGAAGACCTTCCCTGGGTTAAACCCAGTTTACAAAGAATACCATCGCACTTTAATccaggagagggacagagatatGACCGGGGACCGCAGCTATGATGAGGACTATAACCTCTTCAGCTGTCTTTCAAGAAACCCTTGGCTACCAGGTTGGATCCTAACGACAACCCTGATCCTGTCTGTGCTGGTCCTGATCTGGATCTGCTGTGCCACTGTGGCAACTGCTGTAGACCAATATGTACCTGCCGAGaaattGAGCATCTATGGTGACAGGGAGTATGTAAAGgaagagaaactgactccaTATCCAGCATCCTCCCTGATAATCATTACCTCCAAAGGGCCAGAGGAAGAGGCCGGGCCGCTCCCTTCCAAAGTCAACCTGGGCCGGTCTGACATCTAGAAACCAAGCTGTAGCAGAGAAAGAAATTCCTCTTTTAGGAATAATAtttagttgatttttttttttttcctctggcACAACACCTTTTTGCTTCTTATGGTCTAAACAGGAGTAACTTCTTGCAAAACATTTTGTATTACTGATATGTCTCGTCTcccttttgatgctttttaaaattgaagtaatgaaaaggtatttttttgtatattggTATAATTGAGGCATTATAGTATAATGGCaagtaaaatatgttttggGATTTTTCTTTCGACTAGCTCTTTGTTGGTGTGCTTATTTTATGGAATAATTGGTAAAGGAACTATTAGTGATTTGAAGTAATACAGGTTTCAACCCATACCCTTTGGTAAATGTAGATTGTGCTAATATTGCAGGCTCTCcttgtttgttctgtttttactgcagtgatttacagctgatactggattttacaataaaattatTTGCCCTTATcttaattaatattaattatattataataacacAGTTAAGTCTTTCCTGGGTTGCTGTTTGTTCTCATGATGGAtcagaaataaatacaatagTCACGTTGACGTGCGTGTGACTTTCTTCAATCATATACTATAGTTAACTTTCAGTTTATTTGTAAACAAATTTTCAACACAATGTAGCTGTAGGATTCCAGTAACTAGTGCTGTAATTTAAGAGAAATTCAGAgaagacctttttaaaaagtcaaacTACAGATATGGGTTCAAGGTTCTTTATTAGTCATCTGAACAAAATCTTAGGCCTCAGGCACATCCAACAACGCTCCAACTTTAAAAAGCAAACCCAAGCAAAATCTGAATCTAACACCAAAGGAAAAAGTAGTGCAAGTTAAAATAGGTTAAATATGAAGTATACTTGTTTAAGAATTTGTTTTGCAAATGTATATATGCATAATGAGAAATGTATGTTTACAGAGGTGTAAACAGTCtttaaataaaagtgtattacAAATAAA

Function

symbol description
tmem59 Predicted to be involved in positive regulation of autophagy. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in late endosome and lysosome. Orthologous to human TMEM59 (transmembrane protein 59).

NR:

description
PREDICTED: transmembrane protein 59

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815472.1 True 2013 mRNA 0.39 8 17575306 17579575

Neighbor

gene id symbol gene type direction distance location
yipf1 yipf1 coding downstream 3918 17567352 ~ 17571388 (-)
zgc:113691 LOC103353967,LOC104931261,LOC102192286 coding downstream 8260 17564711 ~ 17567046 (-)
ndc1 ndc1 coding downstream 10769 17555980 ~ 17564537 (-)
LOC120569062 LOC103353959 coding downstream 33216 17492287 ~ 17542090 (-)
LOC120567855 NA coding downstream 276382 17297055 ~ 17298924 (-)
cdcp2 cdcp2,LOC103375059 coding upstream 4215 17583790 ~ 17591365 (-)
ranbp3b ranbp3 coding upstream 420325 17999900 ~ 18019896 (-)
LOC120568865 tpm4,LOC107383605,LOC102218802,LOC103146061,LOC103479776,LOC100703626,LOC102199996,LOC106537044,LOC101474423,LOC102789012,LOC106914771,LOC108232925,LOC106936184 coding upstream 481120 18060695 ~ 18070437 (-)
LOC120568287 LOC103353056 coding upstream 571541 18151116 ~ 18170489 (-)
LOC120568289 LOC102296215,LOC102788438,LOC102202758,LOC101476248,LOC100704618 coding upstream 592074 18171649 ~ 18175326 (-)
G115570 lrrc42 non-coding downstream 1181 17573463 ~ 17574125 (-)
G115568 NA non-coding downstream 2177 17572897 ~ 17573129 (-)
G115563 dcaf8 non-coding downstream 22356 17548220 ~ 17552950 (-)
LOC120568661 NA non-coding downstream 218097 17356351 ~ 17357209 (-)
G115458 NA non-coding downstream 272748 17302264 ~ 17302558 (-)
G115577 NA non-coding upstream 27881 17607456 ~ 17608257 (-)
G115624 NA non-coding upstream 386238 17965813 ~ 17967692 (-)
G115640 NA non-coding upstream 495493 18075068 ~ 18076412 (-)
G115641 NA non-coding upstream 496965 18076540 ~ 18077059 (-)
G115644 ap1m1,LOC107750937 non-coding upstream 501623 18081198 ~ 18083844 (-)
ly97.3 NA other downstream 466402 17039800 ~ 17108904 (-)
G115406 crygn,LOC100699485,LOC103353965,LOC103146339,LOC103479740 other downstream 530244 17043126 ~ 17045062 (-)
epb41l3b epb41l3,LOC102298622,LOC106534525 other downstream 763388 16756331 ~ 16811918 (-)
G115312 ralbp1,LOC102778314 other downstream 935494 16637108 ~ 16639812 (-)
LOC120568735 LOC103355759,LOC101465864,LOC100696456,LOC102781658,LOC102293165 other downstream 1239350 16330952 ~ 16335956 (-)
LOC120568693 rab8a,LOC103479775,LOC101170877,LOC108232971,LOC106516875,LOC107687930,LOC102219409,LOC104931433,LOC104950312,LOC105022474 other upstream 473409 18052984 ~ 18058159 (-)
sppl2 sppl2b other upstream 901095 18480670 ~ 18494488 (-)
LOC120568909 LOC103353029,LOC104955147,LOC101484702,LOC102780695 other upstream 1123489 18703064 ~ 18720587 (-)
G115941 NA other upstream 1265330 18844905 ~ 18846277 (-)
LOC120568972 LOC104949378,LOC103135673,LOC106524506,LOC103479814,LOC106906961,LOC102205181 other upstream 1352399 18931974 ~ 18935491 (-)

Expression


Co-expression Network