LOC120568165 (LOC104935786,LOC103354355,LOC104967951)


Basic Information

Item Value
gene id LOC120568165
gene name LOC104935786,LOC103354355,LOC104967951
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13311801 ~ 13318339 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815493.1
CTGGGTCTGTCAGGACGCAAAAACACATCAGACCTGTCAGTTATTAATAGTCGTCTAAGCTAATAAACTGTGATGCTATTTTCAAGCAAGTAAAGGTCGTGTGTGGGTTTGGGATATTCAGCCATGCAGTCAGAGCTCATCTTTGACTTTGCCAGTGACCATGTCAACATGTCACAGttaGGGGGTTACTCGGATTACCCTGCAGTGATTGTGGAGCAGGTTCCCCATCCCCACCTGTTCTCATATACAGGTCTAACGTGTGAACAGTCACAGACAAAGCATCACCAGCAGCTGCTCAAAGTGGAGCAATGTGAAAGTGGAGAGGAAGAGACCATGGagacacttgttgctgctgaTTCCCTTCTCAACATGGACTACCCTGACACCCTCTCTCTGGAACACTActCCCAGACCTTCTTACCATCACTGGGTGATGTCATCACTACTCCTGTTACCCAGGTGACTGTGTCTGCAGAGGGGATTGTGGAAGCGTTTGACCAGCCACAATGGCACTCGTTGCACACAAAGAAGCCTGCAGCACAGCTGCAGTCCAAAAAGAGAGGAAGAAAACCTCGACATAGAAGGGCAGAGTCTCCCACACCAGACATTATAGTGAAGAAGGACAAATACAACAAAGGAGGAAACACACTGTACCTGTGGCAGTTCCTGATGGAGTTGCTGCAGGACCGACAGGTCTGCCCTCGCTACATTAAATGGACTAATCCCCAAGCAGGAATCTTCAAGTTGGTCAACTCAAAAGCAGTGGCCAGACTCTGGGGCAAACACAAGAACAAGCCAGATATGAATTATGAGACAATGGGCAGAGCACTCAGGTACTACTACCAGAGAGGCATACTGAATAAGGTTGAAGGCCAGCGTCTGGTCTATCAGTTCACCTCTCTGCCCAAAGATATGATTTATATCACAGATGGAGATGGCATCAAAGAGGAAGAAGATTACGATCACAACGAAAATAGTGGCAATGATGAGGGCGTGAGTGATGACTCCGATGACAGCACTATACCTTCTAGTGACCAatcagtggaggaggaagattCCCACCCACCACAGAAGAAAACGTCATTCAGCTCTGTTCGATCCCCAGCTACCCAGCGGACCAGGCCAGCTCCCAGGCCCTCAGGCCAGCGTGATACGGTCCTGCGATCTGCCAGCACCAGCTTGATCCAGGAGCAGCATTTGCCTATTGTGTCCGCTGAGATGCTGCGGACCCTCCAGAACCTGCAGAAGGTCCAGTCCCTGCAGCCTGCGGGTCACGCCTCGGTCTTCAAAACCGCTCAGCTGCTGGGGAGTCTGTGTGAGCGACAGGCTGCCGCTGAGGTGGCTGTAGACAGTGATGAAAAGTCACACCCAAGACTCAAAGTGGAGACACCACAGCTGGTGCCCCTAACTAGCTCTGACCAATAGAAAAGACCAATCacccctaaacacacacacacacatatgcacacacatgcatatacactcCACTGACTCAGGACCTGTTACAGAGCTGCATTTTGCTGTAGCAATGTCTGCGCACCAGGGCCTATATTTCTTAAGTGTGAAAGAGTGGGTGCACTGATCTAGgcttattttttgtattttagatTATATTATTAATTGGTAACAAAAGTAATTCTAGATCACTGCTTCCTCCTTGACACCTGATTCGGCAGGAAACTGTCAGGAACCAAAATCTCATAACAAAGCAGTTTACTTTCTAAGAGACTTTAAAAGCGCATGTGCTGTATCTCAGCCTTCTGTCATTCTCTGAAACCGTTAACCATACAAGATACCAAAGACAGACATGCACTGCAATCTCCAGTCCCTCTGCACCTTCTGCAGACACATCCTCTGCTTGCACTTCACCTCCAGCATCATGGATCAAATGATCTGATCAGCACACTGTACCTTCCTTCTCTGCCTTTACTCTCACTCTTtcccactctttttttttttaccatcacaTGCTGAATCATTCCTTTGCCTTAAAAATGACTTTGCACTAGTGTTTACCCCTGCTGTATATTTCTTCTTTAATAGTGCCTGATGATCTCAGTCCATCCTGTCCCCTGCTTCCTTTGTTCCTGGTAATCATGAGGTTATTGAGGGAAAACAttccatattattattattattattattattattatttttttttttttttttttttttaaagattactgaattatgttttgtattgtgaAATGTTGAAAATAAGGGAACACTGTTATTTCTAGAATAGTAATTTAGCACTGCTGCTGTTTGTAGTTAATGTGTCTACACAGTGGACCTTCTTTTTGTTGACAATCACCAGTGAAATGACCTTTTATTTAGCTACATTGCCTCTATAGAGTCATACTGCTACTATTTAGCCTTTCTGCTATGTACACATTCTGTTTAGTTATTACACGTATGCATATATGGACCTCTAAAGCCTTGATATCtttatgtattgtgtgttatatactgtatatctgtgaACATGCTTGACTTTGTGCCTTGTTGCCATTTTCTCCCTCAGGTTCGTACAAAATTAGTTTTACTTCAGACTATATACTCTATGCAAGGAGTAAAACGCCTGGCTCTTTTATAATGAAGTAATGCTAAGTTCAATGTTTTCACTTTTAGTTGATCTTAGTTTAGCCTCACATGCCTCACTCGAATGAAAACTGAGTTTGCAAGATTTAGGCTGGCTTCTGTGAGGCTAAACTTGGCTTAGAAGATGCTTGTAACTGTGCCTTTACCCCCAGGGAATCCTATGCAAAACTGTTTTCACTGTATTACAGAGTAAACCATTTATTTGGAATCTCCTCGCTTTATCTGGAGGTCTCTTGATACTGTAAGTTTTACTGATATTGATATGTAAGCTTGTAGCACAGGGAGAGGTGGAGTTTCTGTTGCCTTATTTTGGTGTGTTTGCTTTCATGCAGGCTGGCAGTGTTGAAAAGATAATATTCTATTATATGAAATAAACTTAATTTTGTCATTGTCTGTTAAA
>XM_039815495.1
GACCACCCTTCGCAAAAATTCAGGAAGTGAAACAAAACATTCCTGGCTTGTGCTTGGGAAGACCGTTAATGAATCATATTAGGATGTAGACGTGGTCAGTTCGGGCTACAGCACACATGCTATGGCTTGTTCCTCACCAGTGCTGGGAATTAAAATGGAGCAATGTGAAAGTGGAGAGGAAGAGACCATGGagacacttgttgctgctgaTTCCCTTCTCAACATGGACTACCCTGACACCCTCTCTCTGGAACACTActCCCAGACCTTCTTACCATCACTGGGTGATGTCATCACTACTCCTGTTACCCAGGTGACTGTGTCTGCAGAGGGGATTGTGGAAGCGTTTGACCAGCCACAATGGCACTCGTTGCACACAAAGAAGCCTGCAGCACAGCTGCAGTCCAAAAAGAGAGGAAGAAAACCTCGACATAGAAGGGCAGAGTCTCCCACACCAGACATTATAGTGAAGAAGGACAAATACAACAAAGGAGGAAACACACTGTACCTGTGGCAGTTCCTGATGGAGTTGCTGCAGGACCGACAGGTCTGCCCTCGCTACATTAAATGGACTAATCCCCAAGCAGGAATCTTCAAGTTGGTCAACTCAAAAGCAGTGGCCAGACTCTGGGGCAAACACAAGAACAAGCCAGATATGAATTATGAGACAATGGGCAGAGCACTCAGGTACTACTACCAGAGAGGCATACTGAATAAGGTTGAAGGCCAGCGTCTGGTCTATCAGTTCACCTCTCTGCCCAAAGATATGATTTATATCACAGATGGAGATGGCATCAAAGAGGAAGAAGATTACGATCACAACGAAAATAGTGGCAATGATGAGGGCGTGAGTGATGACTCCGATGACAGCACTATACCTTCTAGTGACCAatcagtggaggaggaagattCCCACCCACCACAGAAGAAAACGTCATTCAGCTCTGTTCGATCCCCAGCTACCCAGCGGACCAGGCCAGCTCCCAGGCCCTCAGGCCAGCGTGATACGGTCCTGCGATCTGCCAGCACCAGCTTGATCCAGGAGCAGCATTTGCCTATTGTGTCCGCTGAGATGCTGCGGACCCTCCAGAACCTGCAGAAGGTCCAGTCCCTGCAGCCTGCGGGTCACGCCTCGGTCTTCAAAACCGCTCAGCTGCTGGGGAGTCTGTGTGAGCGACAGGCTGCCGCTGAGGTGGCTGTAGACAGTGATGAAAAGTCACACCCAAGACTCAAAGTGGAGACACCACAGCTGGTGCCCCTAACTAGCTCTGACCAATAGAAAAGACCAATCacccctaaacacacacacacacatatgcacacacatgcatatacactcCACTGACTCAGGACCTGTTACAGAGCTGCATTTTGCTGTAGCAATGTCTGCGCACCAGGGCCTATATTTCTTAAGTGTGAAAGAGTGGGTGCACTGATCTAGgcttattttttgtattttagatTATATTATTAATTGGTAACAAAAGTAATTCTAGATCACTGCTTCCTCCTTGACACCTGATTCGGCAGGAAACTGTCAGGAACCAAAATCTCATAACAAAGCAGTTTACTTTCTAAGAGACTTTAAAAGCGCATGTGCTGTATCTCAGCCTTCTGTCATTCTCTGAAACCGTTAACCATACAAGATACCAAAGACAGACATGCACTGCAATCTCCAGTCCCTCTGCACCTTCTGCAGACACATCCTCTGCTTGCACTTCACCTCCAGCATCATGGATCAAATGATCTGATCAGCACACTGTACCTTCCTTCTCTGCCTTTACTCTCACTCTTtcccactctttttttttttaccatcacaTGCTGAATCATTCCTTTGCCTTAAAAATGACTTTGCACTAGTGTTTACCCCTGCTGTATATTTCTTCTTTAATAGTGCCTGATGATCTCAGTCCATCCTGTCCCCTGCTTCCTTTGTTCCTGGTAATCATGAGGTTATTGAGGGAAAACAttccatattattattattattattattattattatttttttttttttttttttttttaaagattactgaattatgttttgtattgtgaAATGTTGAAAATAAGGGAACACTGTTATTTCTAGAATAGTAATTTAGCACTGCTGCTGTTTGTAGTTAATGTGTCTACACAGTGGACCTTCTTTTTGTTGACAATCACCAGTGAAATGACCTTTTATTTAGCTACATTGCCTCTATAGAGTCATACTGCTACTATTTAGCCTTTCTGCTATGTACACATTCTGTTTAGTTATTACACGTATGCATATATGGACCTCTAAAGCCTTGATATCtttatgtattgtgtgttatatactgtatatctgtgaACATGCTTGACTTTGTGCCTTGTTGCCATTTTCTCCCTCAGGTTCGTACAAAATTAGTTTTACTTCAGACTATATACTCTATGCAAGGAGTAAAACGCCTGGCTCTTTTATAATGAAGTAATGCTAAGTTCAATGTTTTCACTTTTAGTTGATCTTAGTTTAGCCTCACATGCCTCACTCGAATGAAAACTGAGTTTGCAAGATTTAGGCTGGCTTCTGTGAGGCTAAACTTGGCTTAGAAGATGCTTGTAACTGTGCCTTTACCCCCAGGGAATCCTATGCAAAACTGTTTTCACTGTATTACAGAGTAAACCATTTATTTGGAATCTCCTCGCTTTATCTGGAGGTCTCTTGATACTGTAAGTTTTACTGATATTGATATGTAAGCTTGTAGCACAGGGAGAGGTGGAGTTTCTGTTGCCTTATTTTGGTGTGTTTGCTTTCATGCAGGCTGGCAGTGTTGAAAAGATAATATTCTATTATATGAAATAAACTTAATTTTGTCATTGTCTGTTAAA

Function

NR:

description
PREDICTED: ETS-related transcription factor Elf-1-like isoform X1

GO: NA

KEGG:

id description
K09428 ELF1_2_4; E74-like factor 1/2/4

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815493.1 True 3001 mRNA 0.43 7 13311801 13318339
XM_039815495.1 False 2855 mRNA 0.43 6 13311801 13317699

Neighbor

gene id symbol gene type direction distance location
sugt1 sugt1 coding downstream 1717 13289358 ~ 13310084 (-)
LOC120568781 NA coding downstream 75554 13232096 ~ 13236247 (-)
LOC120567607 LOC104935780 coding downstream 80897 13224897 ~ 13230904 (-)
LOC120568677 NA coding downstream 93731 13214880 ~ 13218070 (-)
LOC120568680 catip coding downstream 97511 13208030 ~ 13214290 (-)
ednrba ednrb,LOC103354354 coding upstream 8502 13326841 ~ 13333005 (-)
LOC120568167 slc25a30,LOC106963122,LOC103151570,LOC107086856,LOC102233249,LOC100698510,LOC102198731 coding upstream 35890 13354229 ~ 13362042 (-)
LOC120568786 LOC104934149,LOC103354348 coding upstream 103209 13421548 ~ 13437449 (-)
LOC120568580 LOC102206875 coding upstream 122350 13440689 ~ 13465710 (-)
si:ch211-252f13.5 LOC104963693,LOC102078510,LOC102307931,LOC101471818 coding upstream 251010 13569349 ~ 13575574 (-)
G114202 NA non-coding downstream 22808 13288182 ~ 13288993 (-)
G114199 NA non-coding downstream 24581 13286651 ~ 13287220 (-)
G114196 lect1 non-coding downstream 25637 13280931 ~ 13286164 (-)
G114183 NA non-coding downstream 87936 13197745 ~ 13223865 (-)
G114177 NA non-coding downstream 134050 13176803 ~ 13177751 (-)
G114215 LOC103354350,LOC100704451,LOC101473770,LOC106904511,LOC103151571,LOC106963118 non-coding upstream 76122 13394461 ~ 13406830 (-)
LOC120568710 NA non-coding upstream 214799 13533138 ~ 13549466 (-)
G114247 anxa13,LOC105930306,LOC100703370 non-coding upstream 238265 13556604 ~ 13564803 (-)
G114256 LOC102077222,LOC102776852 non-coding upstream 304564 13622903 ~ 13625479 (-)
G114257 NA non-coding upstream 307437 13625776 ~ 13628667 (-)
G114152 NA other downstream 223238 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 336473 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 543176 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 703232 12601180 ~ 12608569 (-)
G113805 NA other downstream 1093534 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 151192 13469531 ~ 13482225 (-)
tfr1a NA other upstream 631532 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1295274 14613613 ~ 14618224 (-)
G114680 NA other upstream 1477579 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 1971743 15290082 ~ 15304610 (-)

Expression


Co-expression Network