toe1


Basic Information

Item Value
gene id toe1
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 11530838 ~ 11537187 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815500.1
CCTCGACAGTTAGCTAAATAAAGTGacgttttgtttatttgtgtctATCGTAAACGCCTGCCTGAAATTTATATTGAAAAGCAAAACGTCAAACAGagaattaaaatttaaaatgtaattacagaaTTTCCGATCAAAGAtttatattaattcattttGCAAATATTGTGCTTACATTAAGGGGAAaacgtttattatttccgcTCAGGCAATAGTCCAACTACTATGGATTTTTTGTTACAAGACCCCGAGAAGCACGTTGAAATGTTTACGGTGGAAGCGCCGTTAGCTGTTGCCCCGAACAAGTGCTAATGAATTTACAACTGCTAAAATAATTACCGAATGTATGAAGATAATATATCAAGTAAGCAACAAATAAGTAAAGGGGTCCGCATAGAGCTGCTATAATGAAAACCTTTGCCaggtagttagctagctaagtttaGCTAATATTccaggtaacgttagccgtCGTAAACTGCTGACAACGTTTCAAGAATAAGAGCTGCTTGCTTTTTACACAAGTTGAGACAAACATGGTGTCATCACTGGTCGTTCCAGTTATTGATGTCCAGAATGATAACTTCAAAGAGCTTTGGCCTGCTATGGTAGTGGCCATGAAAACGTCTTCCTTCGTTGCACTGGACACGGAGCTGAGTGGTCTTGGAAACAGAAAATCCTTGCTGGCTGAATCTATAGAGGACAGGTATAAAGCCGTATGCCATGCAGCTCGCTCTCGCTCCATCCTCTCTCTGGGAATCGCCTGTTACAAGAAACTGGACGACAAGGCTGCAGACACATACCTGGTCCAGGTGTATAACCTCACCCTGCTGTGTTCAGAGGAGTACATCATAGAGCCCCAGTCAGTCCAGTTCCTGGTTCAGCACGGATTTGACTTTAACAAGCAGTACGCCCACGGAATCCCTTACTGTAAGGGCAATAATAAGGGAGCATCAGACGATCAGGGTGTCCACATCCGAGCCTTATTCACTGAACTGCTGCGTGCCAGGAAACCTCTGGTGCTCCACAACGGCCTCATCGACATGGTCTTCCTTTACCAGagtTTTTATGCACATCTGCCTGACCGCTTGGCCAACTTCACATCCGACCTGTCTGAGATGTTTCCTGCTGGCATCTATGACACCAAATATGTCACTGAATTTGAGCTCCGGCTCACTGCCTCCTATTTGGAGTATGCCTATAAGAAATGTAAGCTGGATAACAGTCGCAGTGTGACCTCTGGAGGGAGCGGGCCTCACTTTCATGTAGAGTTCTGTCAGTATCCCGGTCACATGTCCAGCTATGTGGACTACAGAGTGTGTCCAGCTGTGGCCTCTGCTGAGGGACGGACTGAAATCTGCGAGCACTTCTCTGGGTTCGGCTGGTGTACGAATGGCAACCAGTGTCCGCTATCCCATGACACTGACCTGATCATCCTCCAGGACGAGAAAGGCACgggggaaaagagaaaaaagaggaagagacatagagagaagaagaaaggtgGAGGCAAAGCAGCGGAGGGCTCTTCCGTCTTCGACGGTGCCCCTGAAAGCAAAATACCCCACATGGAGGTGGATCCCGAAGAAACGCCAGAGGACCAGCAAGGGGCTGAGCGGGCCCCAGAAAGAAGGCCTCTAACGGACAGTGACGGGAACACCCAACCGAACGAAGGAGAGGCCATGAACACAGGCAGCGAGGGGAACCGAGTGTGTGAAGACAACACAGACTTCCGAAACCTCGCACCAGCGTCCTCAAACGATgacgacacaaacacaaaaatcaaCACAAACGATGGTGTAGAAGGCCAAGCAGAAGATGCAGGGGGAGAAAAGTGTAGCGACCCCACACCTAAGAATGGCGTTCAGACGAAGAAGGCTGACTCAGGAACGCACCGGGCCGGGTTTGATGCCTTTATGACGGGATACATTTTCGCCCACTCGTGTACCGTCATCAAGAAGGAAGGAGTGGGAGCTGGAGAGAAGGAGCCGcagaaggaagaggagcagTCGTGGCTTCCTACATGTGTTAATAAGGTTTACCTCAGCCGCAAGACAGCGCCTCTCAATGTGGTTAAAAGCACCTTCTCCAAATCGTCCAAGAGCCACGTGCAGAAGATGGAGATCGTATGGGGACGGAGAGTGTAGTGTGCACACAGCATTATAGcgtatactgtacatgtgctggttcacaattagattattttagccatgctagcagctagttTCTGGATTTCTGTTGAGTTTTTAGGAATAGGGggataaaatgtcaaatttttCATCCATTTGGGTCTGTTTCTTATGCTCCCatattatttgtatttctttagcAGATTTAActaaacatactgtaaatactattgaaaaaaagataaaaatggaTTTAGAGATTTGTGATTGTAAAACCAGCAATATATACAATGGAGAGGCACCTGTTTTAATTTAGTCAGCTAGTATCTCTATGGTTTCTATGGAAACAGCCAAAGTGAGCTGATGATTGATATGCATTTATACCACATTTCagattttgtatcattattgttTCTGAAGTTACCTGTGGAAAATAAACTAATGCTCTTTAA

Function

NR:

description
PREDICTED: target of EGR1 protein 1-like isoform X1

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K13202 TOE1; target of EGR1 protein 1

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815500.1 True 2581 mRNA 0.45 8 11530838 11537187

Neighbor

gene id symbol gene type direction distance location
urod urod coding upstream 154256 11365369 ~ 11376582 (+)
lyn lyn,LOC100711419,LOC102310923,LOC101477890 coding upstream 166142 11346445 ~ 11364696 (+)
LOC120567621 LOC103360515,LOC104929875 coding upstream 390954 11128019 ~ 11139884 (+)
LOC120567856 LOC104929871,LOC103355149,LOC100690953,LOC102207159 coding upstream 407363 11100278 ~ 11123475 (+)
LOC120567862 LOC104961053,LOC103355148,LOC107384202 coding upstream 430622 11096777 ~ 11100216 (+)
tmem53 tmem53,LOC102777675 coding downstream 867 11538054 ~ 11540262 (+)
rnf220a rnf220,LOC103363915,LOC101079104,LOC103396675,LOC102292039,LOC102777210 coding downstream 184930 11722117 ~ 11874494 (+)
klf17 klf2 coding downstream 426791 11963978 ~ 11966608 (+)
slc6a9 slc6a9,LOC102776426 coding downstream 443952 11981139 ~ 12062243 (+)
lrrc24 LOC103370491,LOC104954089,LOC102776146,LOC102302164 coding downstream 537789 12074976 ~ 12089561 (+)
G113620 NA non-coding upstream 5588 11524978 ~ 11525250 (+)
G113619 NA non-coding upstream 6070 11519300 ~ 11524768 (+)
LOC120567863 NA non-coding upstream 475032 11046556 ~ 11055806 (+)
G113498 LOC104957117 non-coding upstream 602595 10926456 ~ 10928243 (+)
G113492 NA non-coding upstream 643171 10886992 ~ 10887667 (+)
LOC120568871 NA non-coding downstream 45717 11582904 ~ 11694250 (+)
G113682 NA non-coding downstream 47249 11584436 ~ 11584636 (+)
G113681 NA non-coding downstream 171187 11708374 ~ 11722041 (+)
G113689 NA non-coding downstream 290216 11827403 ~ 11887669 (+)
LOC120568095 NA non-coding downstream 341526 11878713 ~ 11954877 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 184613 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 644360 10885595 ~ 10886478 (+)
G113130 NA other upstream 2528270 8944477 ~ 9002568 (+)
pdca LOC103370803,LOC104933924,LOC101478313,LOC102200750,LOC100699795,LOC102301525 other upstream 2627991 8895927 ~ 8902847 (+)
LOC120568881 mfsd12,LOC104931866 other upstream 2705027 8812897 ~ 8825811 (+)
abhd4 abhd4 other downstream 585482 12122669 ~ 12128022 (+)
LOC120568189 nop9 other downstream 620262 12157449 ~ 12166277 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other downstream 1045455 12582642 ~ 12599840 (+)
LOC120568152 LOC104963178 other downstream 1364352 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 1374252 12911439 ~ 12919198 (+)

Expression


Co-expression Network