znf830 (znf830)


Basic Information

Item Value
gene id znf830
gene name znf830
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 22015922 ~ 22017307 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815514.1
CTACGACGCACAGCGTGCACGCGAGTTCATGCAGTTTATGTCATCTTCATGAGACGCATTTTAACTTCATCGCAGACAAGTAGCTAGCTGGCTAACAAGCTGCGTTGTTTACAAGAATGGCATCCTTAAAGAAGGGGAAGAAAGTTGTAAATCAGGAGGAACTACGACGCTTAATGAGGGAAAAACAAAGGCAAACCACAGACAAGAAGCGCGTCGAGTCTCCTTTTGCTAAATACAACAGTCTCGGGCACCTCAGTTGTGTCCTGTGCAATGTGCAGGTGAAGTCTGAACTACTGTGGCCGGCGCATGTTCTTGGAAAACAGCACAAAGAAAAAGTTGCTGAGCTGAAGGGAGGAAAGAGTCAACCAGTGACACCACAGTTTCAACCAGTAAAGAGGAAAGCACCGGACAACGAGGACGTCAACGGGAAAAAGGCGAAACCTTCGTCGGATGCAGGCCAGTCTGCGTCGTCAGGGCTGCCAGGAGATTTCTTTGAGAAACCCAGCGAAAAGGGAGCCTCCTCTACTCAAAAATCTGCAGGTCTGAGTCTGTTGGCCGAAGGTTATGACGAGGACGATGATGAAGAAGATGCTAAAGAGGCAGGAACCACAAATCCCCCTCCGCAAGAGGCTGAAGCTGCAGGACTACCCGCTGATTTCTTTGACAGCTCCATCCCATCAACTCCTGCCATCTCCCATTCAGGATCCATCCTCAAAGCAGATGTGCAAGAGAAAAGCACAGAAACGAAAGAAAACACAGCCGAGGCACTCCCAGAGGGCTTCTTCGACGATCCTGTGAGAGATGCTAAAGTGCGCAACGTCGACGCACCCAAAGATCACATGGACAAGGAGTGGGACGAGTTTCAAAAGGAGATACGACAGGTAAACACTAAATCAGAGGCCATCGTGGCGGAGGACGACGAGGAGGGCCGCTTTGAACGACAGATTGAGGAAATCGACGAACAAATTGAGTGTTACAAGAGGGTTGAAGTACTGAGAGACAAGCGGGATGTGGCAAAGAGCAAGCCTCTGCCCATTATGGAGGAACGTATGGAGGTAGACGCCAGCGATGAGGAAGAAGAGAATGAAGAGGAGCTGCTGGGGCTTTTGTCCCGGGACTGGAGGGCTAAAGGGGCACTGGCCTAAGTCTCTCTAGACCTCATACAACTGGGAGGAAAAAAAGGccatgtgtgtttctttttgtaCAAGTCTGTCAGCAATCCAACActtgtaaatatgtttgttaaAAGCTCTTCACCACCTTTTTTTGGTATATTTCAGACTGGATTAAATGTGATGCAGTGATACGCAGAGTACTTGTAAAACATTGTTTAGGCAGTGTTTCTCAGTTCATGACTTAAAGCAACCAGATGGACAACAAATCAAA

Function

symbol description
znf830 Predicted to enable nucleic acid binding activity and zinc ion binding activity. Predicted to be involved in several processes, including DNA-dependent DNA replication; mitotic DNA integrity checkpoint signaling; and preantral ovarian follicle growth. Predicted to act upstream of or within several processes, including blastocyst growth; intestinal epithelial structure maintenance; and mitotic cell cycle. Predicted to be located in nucleoplasm. Predicted to be part of spliceosomal complex. Predicted to be active in nucleus.

NR:

description
PREDICTED: zinc finger protein 830

GO: NA

KEGG:

id description
K13104 ZNF830, CCDC16; zinc finger protein 830

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815514.1 True 1386 mRNA 0.48 1 22015922 22017307

Neighbor

gene id symbol gene type direction distance location
LOC120568175 LOC104935914,LOC104955993,LOC103364110,LOC100699175,LOC102214823 coding upstream 13058 21995600 ~ 22002864 (+)
LOC120568173 LOC103396305,LOC101065160,LOC103364109,LOC100698908,LOC104955975 coding upstream 28440 21983014 ~ 21987482 (+)
cacna1eb NA coding upstream 33876 21921651 ~ 21982046 (+)
klhl14 klhl14,LOC102797134 coding upstream 99025 21899568 ~ 21916897 (+)
cebpd cebpd coding upstream 217068 21797438 ~ 21798854 (+)
LOC120568357 LOC103364114 coding downstream 48707 22066014 ~ 22151613 (+)
prkacbb LOC102779523,LOC103396312,LOC107383895,LOC108239664,LOC105935432,LOC104931534,LOC100699977,LOC101066292 coding downstream 171860 22189167 ~ 22200648 (+)
exosc4 exosc4 coding downstream 184245 22201552 ~ 22204193 (+)
gpaa1 NA coding downstream 187188 22204495 ~ 22210738 (+)
LOC120568851 NA coding downstream 203401 22220708 ~ 22226126 (+)
G116794 mapre2 non-coding upstream 177170 21834466 ~ 21838752 (+)
G116746 NA non-coding upstream 353452 21614100 ~ 21662470 (+)
G116723 NA non-coding upstream 515528 21454330 ~ 21500394 (+)
G116657 NA non-coding upstream 689659 21270751 ~ 21326263 (+)
G116616 NA non-coding upstream 771529 21243641 ~ 21244393 (+)
LOC120568180 NA non-coding downstream 7806 22025113 ~ 22036950 (+)
LOC120568856 NA non-coding downstream 217512 22234819 ~ 22238505 (+)
LOC120568744 NA non-coding downstream 290460 22307767 ~ 22314947 (+)
G116978 NA non-coding downstream 448028 22465335 ~ 22472840 (+)
G117077 NA non-coding downstream 729813 22747120 ~ 22747732 (+)
LOC120568354 NA other upstream 118531 21870953 ~ 21897391 (+)
LOC120568904 crhr2,LOC101476678,LOC102776588 other upstream 1100600 20882617 ~ 20915322 (+)
LOC120567833 gbg5 other upstream 1640289 20373227 ~ 20375633 (+)
emilin2a NA other upstream 2550541 19447011 ~ 19465381 (+)
LOC120568770 NA other upstream 2963680 19017039 ~ 19052242 (+)
LOC120567968 NA other downstream 590742 22608049 ~ 22620131 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other downstream 624203 22641510 ~ 22681293 (+)
kdsr kdsr,LOC102792240 other downstream 1416318 23433625 ~ 23440843 (+)
LOC120567964 dpp6,LOC100710983 other downstream 1575425 23592732 ~ 23685804 (+)
G117319 LOC101487892,LOC104941256 other downstream 1833572 23850879 ~ 23855157 (+)

Expression


Co-expression Network