ndufa13 (ndufa13,LOC102786334)


Basic Information

Item Value
gene id ndufa13
gene name ndufa13,LOC102786334
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 26815684 ~ 26819017 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815551.1
CGGACCAAAGAAGAAGCGTGACGTGTGCAGCGTGTTTTGGGAGAAGGCTGGAGGAAGATGGCGGGGTCCAAGGTGAAGCAGGACATGCCTCCTCCGGGAGGCTATGCTCCGTTTGATTATAAGAGAAATCTGCCGAAAAGAGGACTCTCTGGATATAGCATGTTTGGCATTGGCATTGGCATCATGGTCTTTGGCTACTGGAGGCTTTTTAGCtggaacagagagaggagGCGCTTGCAGATTGAGGAGATGGAAGCGAGGATAGCTCTGATGCCCCTGCTGCAGGCAGAGCAAGACCGAAgGTCTTTACGGATGCTGAGGGAAAATCTAGAAGAGGAGGCGATTCTGATGAAGGACGTTCCTGGTTGGAAGGTTGGTGAGAAGGTCTTCCACACAGACCGCTGGGTCCCCCCTCTGTCAGAGGAGCTGTTTAACCTCCGGCCCCGCGAACAGCTTCTGCACAAGCGTTTCGGTTTCTTGTGGTACGTGTAAGCACCACCAAAGACGCACAGCGTCCTGAGCTCCACCACCTTCCACAGCCAGCACCATGTGGACCTGAGCCCTCGCTCAACTCAGCTTGTAAATGTTCAATATTAAAGTATCTTTTTTTCTGTACCTCA

Function

symbol description
ndufa13 Predicted to be located in mitochondrial inner membrane and respirasome. Predicted to be integral component of membrane. Is expressed in intestine. Human ortholog(s) of this gene implicated in nuclear type mitochondrial complex I deficiency 28 and thyroid gland Hurthle cell carcinoma. Orthologous to human NDUFA13 (NADH:ubiquinone oxidoreductase subunit A13).

NR:

description
PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 13-like

GO: NA

KEGG:

id description
K11353 NDUFA13; NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815551.1 True 620 mRNA 0.53 5 26815684 26819017

Neighbor

gene id symbol gene type direction distance location
LOC120569005 LOC106935698,LOC103153539 coding upstream 2259 26792202 ~ 26813425 (+)
zgc:85843 tm6sf2,LOC104924838,LOC102294137,LOC102201647 coding upstream 143426 26666504 ~ 26672258 (+)
LOC120568699 slc25a24,LOC104964315,LOC103357622 coding upstream 227113 26580603 ~ 26588571 (+)
LOC120568740 NA coding upstream 250039 26559608 ~ 26565645 (+)
LOC120567674 NA coding upstream 256043 26554070 ~ 26559641 (+)
LOC120567603 LOC103357602,LOC108239446,LOC104948981,LOC105934574 coding downstream 71918 26890935 ~ 26899765 (+)
LOC120568413 LOC107384102,LOC105934594,LOC104929657,LOC103366675,LOC108239475,LOC103395958,LOC102222760 coding downstream 139649 26958666 ~ 26963795 (+)
sf3a2 sf3a2 coding downstream 174186 26993203 ~ 26997296 (+)
LOC120568316 LOC103366679,LOC104964519,LOC102791861,LOC100706611 coding downstream 219318 27038335 ~ 27090300 (+)
LOC120567789 NA coding downstream 312136 27131153 ~ 27134151 (+)
LOC120569008 NA non-coding upstream 30825 26781367 ~ 26784859 (+)
LOC120569009 NA non-coding upstream 52424 26743741 ~ 26763260 (+)
G118115 NA non-coding upstream 141233 26602656 ~ 26674451 (+)
G118135 NA non-coding upstream 150840 26662282 ~ 26664844 (+)
G118098 NA non-coding upstream 210600 26548656 ~ 26605084 (+)
G118164 NA non-coding downstream 2226 26821243 ~ 26824078 (+)
G118263 NA non-coding downstream 149487 26968504 ~ 26968990 (+)
G118265 NA non-coding downstream 157281 26976298 ~ 27055691 (+)
LOC120568996 NA non-coding downstream 200829 27019846 ~ 27021109 (+)
G118283 NA non-coding downstream 379166 27198183 ~ 27198459 (+)
G118149 NA other upstream 45773 26765492 ~ 26769911 (+)
prkab2 prkab2,LOC101470867,LOC107384083,LOC102226598 other upstream 215612 26590782 ~ 26600072 (+)
wdr47a wdr47,LOC102290984 other upstream 318875 26421454 ~ 26496809 (+)
ccl20a.3 NA other upstream 397676 26416508 ~ 26418008 (+)
G118011 eif4e2 other upstream 413606 26395426 ~ 26402078 (+)
LOC120567599 LOC101062208 other downstream 20161 26839178 ~ 26857394 (+)
LOC120568791 LOC103357601 other downstream 59538 26878555 ~ 26938882 (+)
G118234 sugp1 other downstream 64542 26883559 ~ 26886030 (+)
tcf3a tcf3,LOC103366684,LOC104929652 other downstream 328044 27147061 ~ 27177206 (+)
LOC120569025 NA other downstream 360080 27179097 ~ 27182720 (+)

Expression


Co-expression Network