LOC120568200


Basic Information

Item Value
gene id LOC120568200
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24253388 ~ 24257335 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815560.1
CGCCTGACAACAAACCGTGCGTACCTATCCGTAAAATCCCGCCCATTCAGTCGCCACCACACTACTGTAGCAATCTATGTGTAGCAAcaacggttagctaaattagctTAGCGCTGTTGTTGAGGTTGGAAGATAATAGTTAAAAGTTAATCCGTCCGTATTCTTTATGAGCATTACAAAACGCGGTCTGACAACGGTAACAGAGCTGTAACGTTAGGGGTAGAACTTAAATCCAGGATGTGCTCCGTTGTCGGATGTGATTCGGGGCGTCGCAGTGCGCAACGGTTTAAGTTACCGGAGGACCCAGAGAGGAGACTGGAGTGGGTTCAGTTTCTCGCTACAGTCAACATGCAGCGGTTTAAAGAAGCGTCCTGGACAGACATTAGAATTTGTAGCGAACACTTTAAAGGCGACTGTTTTAACAACATGTCACCGAGCCATTCAGGTTTTACTGACAAGgaccagctaacgttaaatcCCAATGCTGTCCCATCACTGTGTCTCAAGTCCGAGTCAGAGGAACCTGAGACACATCTGCAGAGCCCAACATGTGTGGAGCCTGAGGAAACCACAGAAGTTGCTTATCAGCATGATCAACTTAAAACATGTGATGGCCCAACTTCCTTTCCTGAAGAATCAAGACTGACTTCAACggCTTCTGAAGGAAGCCCAGTCCCAAGAGGTGTCTCATCCTCAACTGATTCCTCAGATGGTTTTTTTATATCCATATATCGTCAGCTGCAACCAACAAATACGAATTTGGATTTGATGAAAGAAAAAGCATCACTTCTGCAGACGAAAGGGAAGTATGTCGTTAATGAAAAACGCCTCCTCCAGTTGTTCAGCCACAAGTGCCCGTCATGTGGTTCTAAAGTAAAGATGGAGAAGGTCACCCATGGGGTGCTCATCATCTTGAACCAACAGTGCCTTCAGTGTGACTACAGAAACCAATGGAAAAGCCAAGTCACTACCAGTGTCCCAACAGCTGAAGACCAATGCCTGACAGAAGTAGTAGAAGTAGACCTAACTCCAGAGACCCAACAGGCAGTGTCAACAGATGACAACCCCAGCACTATCGCAGGAGTCCCTGAGATTGTTGCTGTTATTGATGACAAAAGTGATGCCATGGCTGAATCAGGGGAATCGAGTAATCAGGGTGACATGGATTCAGACGAGGATTGGAAGCCAAAGAATTTGGTGCTGGCTAAAATGCTCAAAAATACCCATGATGACAAAACTAAAGAGAAAGAAGATTATGCTTTTCCTCCACTTGTCCCCAAACAAGGTCAGCTCTGCACAGAGTGTGGAAAGTTTTTTAATAAACAGAGGCCTCACACATGTGAGCACAAAATTAAACCCTATTCTTGCAATATTTGTGGTAAGAGATGTGTTAGCAAGTTCACGCTAAATACTCACAGCAGAATCCACAGTGAAAACTATGAGCATCGGTGCAAATACTGCCACGTTACATTCAAAACAAAGGTGGACAAGATCAGTCACGAGCAGATCCACCTAACTGAAGGAAAGCCCTATAAATGTCCCGAATGTTCAGAGACATTTGCCAAAAATAAGGAACGCAGAATCCACCTGGAGGATCACAGAGGCCCCCCACAGTTGAAGTGTTACTTCTGTGGGATTGAATTCCTCTGGCCACTTAATCTCCAGAGACACTTGGCGGtgcacacaggagagaagccgttCAAGTGTTCAGTGTGCCAACGTGGCTTCAGCCAGCCAAGCCACCTGAAATCCCACATGCGTCTGCACACAGGGGAGAGGCCTTTTAAATGTCAGCACTGTGACAAAAGCTTCAATCACAACGTGAGCTTGAAGAGTCACGTCCAGCGTTACCACCCATCGAGCTCTGAACGTGAACAGAATATAGAAAAGATAAACGAAAGGGCAAGTGACGCTGGCGATGTTCAGGATAATGGAAGTAACGGAGGTGCAGTATCAGGACTTGACAATGTAGAGGAAGAAGGCGACacggaagaggaggagggaatatatagacctaaaaaaaaaaggaaaagcacaggtagGCCCATAGGAAGGCCTAAGAGCTATGAATCGCGCAACCTCGTAGAAGGCAAGTGTTCAAACACCAAGACTGGAAATCTACAAGAATGCAGCGATGAAGAAAGTCAGTTAGAGCCGAGGTACCGTGACGCATCCTTTGATCCagcagaagaggaagaggagagcagCAAGAAGGCGATAAAGGCCGCCGCGAGATCGAGGGGAAGAGCGAAACATCCTGATAGTGACTCCGATTTTGAtcctgaagaaaaaaagacaaagaggtACAGCAGCCAGAGCAGTGGTAACAGCTCTGGGAAGCGTAGGGGAAGACCAAGGAAAAATCTTAAAGAATAGGGTTAAAATGAACAGAGCTAAGGAATTAATTTGGTCTATGCCAGGGTTTGGCTGTatactcaattctgattggcttcAGGTTGtccattaacccttgtgttgttcttcgggtcccagtgacccgaaggacaacacaagggttatgta

Function

GO: NA

KEGG:

id description
ko03022 Basal transcription factors
ko03030 DNA replication
ko03420 Nucleotide excision repair

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815560.1 True 2523 mRNA 0.46 5 24253388 24257335

Neighbor

gene id symbol gene type direction distance location
amotl2b NA coding upstream 5768 24240706 ~ 24247620 (+)
aire NA coding upstream 29790 24220237 ~ 24223598 (+)
rab6bb rab6b,LOC104929189,LOC105028793,LOC104957876,LOC103360106,LOC100708038,LOC101156359,LOC106534664 coding upstream 36933 24209550 ~ 24216455 (+)
espnlb NA coding upstream 43936 24200243 ~ 24209452 (+)
kif1ab NA coding upstream 55737 24171045 ~ 24197651 (+)
LOC120568201 NA coding downstream 2128 24259463 ~ 24267286 (+)
LOC120568202 NA coding downstream 12349 24269684 ~ 24278078 (+)
tnr tnr coding downstream 116954 24374289 ~ 24545760 (+)
mrps14 mrps14,LOC101476193 coding downstream 402797 24660132 ~ 24662064 (+)
plk3 plk3 coding downstream 419648 24676983 ~ 24685579 (+)
G117488 NA non-coding upstream 83435 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 83833 24164854 ~ 24169555 (+)
G117476 NA non-coding upstream 102617 24150458 ~ 24150771 (+)
G117406 NA non-coding upstream 208904 24043969 ~ 24044484 (+)
G117405 NA non-coding upstream 209847 24036655 ~ 24043541 (+)
G117523 NA non-coding downstream 219 24257554 ~ 24258831 (+)
LOC120568139 NA non-coding downstream 80358 24337693 ~ 24339256 (+)
G117547 NA non-coding downstream 299084 24556419 ~ 24556657 (+)
G117632 NA non-coding downstream 580621 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 860896 25118231 ~ 25118502 (+)
LOC120569114 NA other upstream 198684 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 229729 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 338890 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 344987 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 398231 23850879 ~ 23855157 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 312193 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 410544 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 605661 24862996 ~ 24870087 (+)
G117664 NA other downstream 693233 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 730164 24987499 ~ 25044057 (+)

Expression


Co-expression Network