LOC120568201


Basic Information

Item Value
gene id LOC120568201
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24259463 ~ 24267286 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815561.1
CCCCGCCATTAAACCCCGCCCATTGAGCCCCCAACGTGCGTGCCAGCCCGCCACTGTCGAGCAATGatggctagctagctgttagctggtAGCTGTCTGGGACGTCGGGATAGCAGAGTCCACACCAGGGCTTGTGTTCCAGTCCCCGTAAACATTGAAACAGCCCGGCCACTTTTAAAAACTGAAGGGACAGAACTTAAATCCAGGATGTGCTCCGTCGTCGGATGTGATTCGGGGCGTCGCAGTGCCCTACGGTTCAAGTTACCGGAGGACCCAGAGAGGAGACTGGCGTGGGTTCAGTTCCTTTTCGAAATCAACGGGCAACGACTTAAAGAATCGTCCTGGACTGATATCACCATTTGTAATGAACACTTTACTGAAGACTGCTTTGAACACCTGGCTCCAGGGACTGGCGCGGTCCACCTAAAGCCCGGTGCTGTCCCATCACTGTGTTTCAAGTCGGAGCTAGACGAACCGGAGCTGTACTCCATAGAGCTGGATCAGGAGCCTGAAGAAACCATAGAAGTTGCTTCGCAATGTGATCAACTTAGCACATGTGGCAGTCCATGTTCCTATTCcgaagaatcagaatcaacttCATCTTCAACGGctGCCCAAGAAAGCCCTGCACCGAGTGATGTTTCAGATTCTTTCATGTCTGATTATGGTCCGATGCTGCAAAAAATTCTGAACATTGATATGATTAGGGAAAAagCTGCACTTCTGCAGACGAAAGGGAAGTACGTTGTGAATGAAAAACGCCTCATCCAGTTGTTCAGCCACAAGTGCCCGTCATGTGGTTCTAAAGTAAAGATGGAGAAGGTCACCCATGGGGTGCTCATCATCTTGAACCAACAGTGTCTTCAGTGTGACTACAGAAACCAATGGAAAAGCCAAGTCAATGCCAGTGTCCCAACAGCTGAAGACCAATGCCTGACAGAAGTAGTAGAAGTAGACCTAACTCCAGAGACCCAACAGACAGTGTCAACTGATGACAACAGCAGAACTTTTTCTGATGAGAAGAGTGATTACACGGATGAAACGGAGGAATCGGGTGATGAAAGTGACAGGAATTCAGACGAGGATTGGAATCCAGCGGAGGAGCTTCTTCTGGATAACGAGCTTCGTGATGAATCGGAGGATGAAAccggagaggaagaggaagaagatgatgatgatcttCCATTTGCCTCCAAAAACAGCCAGCTCTGCACAGAGTGTGGAAAGTTTTTTAATAAACAGAGGCCTCACACATGCGAGCACAAAATCAAACCCTATTCTTGCAATGTTTGTGGAAGACGATTCATTAATGACCCTGCGCTAAATCTTCACAGCAAAATCCACGATGCAAACTATGAACTTCCATGCAAATACTGCCACGTTACATTCAAAACAAAGGTGGACAAGATCactcaccagcagatccacctAAGTGAAATAAAGCCCTATAAATGTCCCGACTGTTCAGAGACATTTGCCACAAATAAGGAACGCAGAATCCACCGGGTGGATCACGGAGGCCCCCCACAGTTAAAATGTGACATCTGTGGTATTGAATTTACCCGACCCTATATTCTCCAGAGACACTTAGCGGtgcacacaggagagaagccgttCAAGTGTTCAGTGTGCCAACGTGGCTTCAACCAGCCAAGCCACCTGAAATCCCACATGCGTCTGCACACAGGGGAGAGGCCTTTTAAATGTCAGCACTGTGACAAAAGCTTCAATCACAACGTGAGCTTGAAGAGTCACGTCCAGCGTTACCACTCATTGAGCTCTGAACGTGAACAGAAGAAgggtaaaataaacaaaactgtaAGCTACAGTGTTCAAGCTCAGGAGAATGTGAACATGAGAGGCACAGACTTTGAACGTGATAAAGAAGTGGAGTTGCATAAGCAGAGCAAAGGTATGCCAAAACGTAAAAGGAAGAGCTCCGGTAGACCCATAGGAAGGCCCAAGAGAAATGCAGCAGGCAACTTGGTTCTGGCCGGGGAAATGCAAGGCCAGCCTTCAAACACTAAGACTGCCAAAGTTAAGGTGCGGAAGTTAAAGAGAACACGCTGCAGTGATGAAGAAAGCGAGGATGAGCCGACCGAAAGCGACATGTCCTTTGACTcaacagaggaggaagaggagaataGTGAGAAAGTGACAATGAGAGCAAGCAAATCGAGAGGAAAGGCAAAAGATTCTGATGGCGACTCTGATTTTGAgccagaagaaaaaaagaaaaagaggtacAGCAGCCAGAATAGTGGTAAAAGCTCAGGGAAGGGAAGGGGAAGACCAAGAAAGAAGCAAGTACTTAAAGACatgtaaaaacatttgaaaagagAGGTTATAGAGTTAAACATGTATTAAGACAAATACAATTTAGAGTGTCATACAGAAGTTGACTGTTTTTCATGAtgcatttgaacaatttaagatGAGAAACTGCACATGGAGAGTTGGGCTGGGGTCTTTTTAAACTTCATTGCTTCCAATTGTTAAAGCATGAGCCTGTTTAAGGTGGGACTGATGCGCCTTAAGCCCCCTCGCCGTCTGTGTGAAAGTTATTAAGACGGGGGGTTGTTGCGCCTTTAAGCCTGCAGTGGAGGTAATCCCAGAGCCGAGCCAAGTTCTGTGTGAAAGGGACAGCCAGCGTGGCGGGACTAAGTTCCATGCAGTATGATGCACTAATCGACCTACAGGGTCCGGTCGGGTTTACATGGCTGATTAACGCTGCAGATCGGCTCACACACACTAGACCCATGCCTCTATTGCTGCCAGAAGcaatacagtatttatttttctagGATGGCAAAGGCATGAACTTGGATTGGCTTTCCCTGGTGTTCTTAGCctaaccaatctcactcctcatgtctaaacctaaccaatctAACCCGTGAAGGCAAtgactactagccaatcagaggcagagtagggcgggtcatgccttcgccatcctaggaaaTGCAAATTTGCCTCCCATAATGCCGGCATGCTATGTAAAATCACACTGGCTTGCTTGGTTCTGTgggaataaacaaacagcaaacCTTAATTGCAGCGCAATTGCGTAATCTCTGTATGAAAGGGGCTGATGTCAGTTAGATTTCAAGATACTTTTGAATCCTGTTCACAGATGTTAAACATGGAATCAACCTGGGTAAAATTAGATTAAACTGGGCTGGTTTTAAAATG

Function

GO:

id name namespace
GO:0022402 cell cycle process biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0010948 negative regulation of cell cycle process biological_process
GO:0044770 cell cycle phase transition biological_process
GO:0044772 mitotic cell cycle phase transition biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0007049 cell cycle biological_process
GO:0007346 regulation of mitotic cell cycle biological_process
GO:0007093 mitotic cell cycle checkpoint biological_process
GO:0009987 cellular process biological_process
GO:0045930 negative regulation of mitotic cell cycle biological_process
GO:0010564 regulation of cell cycle process biological_process
GO:1901987 regulation of cell cycle phase transition biological_process
GO:1901988 negative regulation of cell cycle phase transition biological_process
GO:1901990 regulation of mitotic cell cycle phase transition biological_process
GO:1901991 negative regulation of mitotic cell cycle phase transition biological_process
GO:0043226 organelle cellular_component
GO:0043229 intracellular organelle cellular_component

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03030 DNA replication
ko03460 Fanconi anemia pathway
ko04111 Cell cycle - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815561.1 True 3195 mRNA 0.47 5 24259463 24267286

Neighbor

gene id symbol gene type direction distance location
LOC120568200 NA coding upstream 2128 24253388 ~ 24257335 (+)
amotl2b NA coding upstream 11843 24240706 ~ 24247620 (+)
aire NA coding upstream 35865 24220237 ~ 24223598 (+)
rab6bb rab6b,LOC104929189,LOC105028793,LOC104957876,LOC103360106,LOC100708038,LOC101156359,LOC106534664 coding upstream 43008 24209550 ~ 24216455 (+)
espnlb NA coding upstream 50011 24200243 ~ 24209452 (+)
LOC120568202 NA coding downstream 2398 24269684 ~ 24278078 (+)
tnr tnr coding downstream 107003 24374289 ~ 24545760 (+)
mrps14 mrps14,LOC101476193 coding downstream 392846 24660132 ~ 24662064 (+)
plk3 plk3 coding downstream 409697 24676983 ~ 24685579 (+)
eif2b3 eif2b3 coding downstream 491879 24759165 ~ 24797248 (+)
G117523 NA non-coding upstream 632 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 89510 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 89908 24164854 ~ 24169555 (+)
G117476 NA non-coding upstream 108692 24150458 ~ 24150771 (+)
G117406 NA non-coding upstream 214979 24043969 ~ 24044484 (+)
LOC120568139 NA non-coding downstream 70407 24337693 ~ 24339256 (+)
G117547 NA non-coding downstream 289133 24556419 ~ 24556657 (+)
G117632 NA non-coding downstream 570670 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 850945 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 858545 25125831 ~ 25130929 (+)
LOC120569114 NA other upstream 204759 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 235804 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 344965 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 351062 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 404306 23850879 ~ 23855157 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 302242 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 400593 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 595710 24862996 ~ 24870087 (+)
G117664 NA other downstream 683282 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 720213 24987499 ~ 25044057 (+)

Expression


Co-expression Network