LOC120568202


Basic Information

Item Value
gene id LOC120568202
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24269684 ~ 24278078 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815562.1
AATAAACAATGCACCTTCTATTTTTAATTTCCTTAGGTAAACTCGAAGCACAGTTGGTCCATCGTCACTCAATGCATGCGCGCTCCCGCTGCCAGGGGCACACTTTCTATTAGATGGCAAGGACACTTATTAAGAGGGTAACTACTTTTGCACAACGAGTCGGGATGCGCCTGATATCAAACCACGCGAACCCAGCTAGTAAACCCCGCCCATCAAGCCTTCGCGCCAAGCAGAGGtggttagctgttagctgttagctgtttgGGACCACGCCGGGATAGCAGAGTCCACACCGAGGCCTGTGTTCCAGTCCCCGTAAACATTGAAACAGCCCGGCCACTTTTAAAAACTGAAGGGACAGAACTTAAATCCAGGATGTGCTCCGTCGTCGGATGTGATTCGGGGCGTCGCAGTGCCCTACGGTTCAAGTTACCGGAGGACCCAGAGAGGAGACTGGCGTGGGTTCAGTTCCTTTTCGAAGTCAACGGGCAACGACTTAAAGAATCGTCCTGGACTGATATCACCATTTGTAATGAACACTTTACTGAAGACTGCTTTGAACACCTGGCTCCAGGGACTGGCGCGGTCCACCTAAAGCCCGGTGCTGTCCCATCACTGTGTTTCAAGTCAGAGCCAGACGAACCTCTGGAGAGCCCACATTATGTGGAGCCTGTTCAAACCACAGAAGTGGCTTGTGATGATGACATTAAACCGTGTAATACTTCAACTTCCTACTCGGAAAAAGCAAAACCTACTGTAACTGGTTTCCATGCAAGCCCGGTGTCACATTCACCAGATGCTTCGAATGCTGTCACCTCTGGCGATTTAATCAAGGAAAAAGCTGCGCTTCTGACGGAAGGAAAGTGTATTGTGAATGAACGCTGCCTCCTCCAGTTGTTCCGCCGCAAATGCCCGTCATGTGGATGTAAGCTTCAGATGGAGAAGGTCACCCATGGGGTGCTCATCATCTTGAACCAACAGTGCCTTAAGTGTGACTACAGAAACCAATGGAAAAGCCAAGTCAATGCCACTGTCCCAACAGCTGAAGAGCAACACCTGACAGAAGGAGTGCCAACAGATGGCAATCTCAGCAGCACAGTTTTCTCTGAGATTGTTACCCTTAGTGATGAAGAAAGTGATCCGTCAGGTGAAGAAGAAGGTGATGATGGCGAGGTGAGTTCCGATGGGGAATGGAATCCAACTGAGGATATTTTGCTGGCTGAAGAGCTCACAAAGAACTCTGAAGAGGAAACCGAAGATGAAAGCGAAGATGGAAGCGGACAGGATAGCGAAGAGGAGGAAGATTCTCCGGGTGGCCTCCAAATTCATGAGCTCTGCACCGAGTGTGGACGTTTTTTCACTATCCTGAAGCCTCACACATGTGAGCACAAAATAAAGCCCTATTCCTGCAACGTATGTGGCAAACGGTGCGTTACCAAGACGTCTCTGAAAGTTCACAGTAGGATTCACGATGAAACCTATGACCATCCATGTAAATTCTGCCACGCTCCCTTCAAAACAAGGGTGGACAAACTTAAACACGAGCAGATCCATGAAGACAGGAAAGATCGCTATAAATGTCCCGACTGTCCCGAGACATTTACCACCAATACAAAACGCAGAATTCACCTGGCAAATCACAGAACCCCAAAGGAGTACAAATGTGGAGTTTGTGATCTTGCGTTTAAGGATGTACATCATCTTCGGAGACACTCTGTTGTGCACACAGGATTGAAACCGTACACGTGTTCAGTGTGCCAACGTGGCTTCAACCAGGGAAGCCACCTGAAATCCCACATGCGTGTGCACACGGGGGAGAGGCCTTTTAAATGTCCGCACTGTGACAAAAGCTTCAATCACAACGTGAGCTTGAAGAGTCACGTCCAGCGGTACCACTCGTCGAGCTCTGAACGCGAACGAAAGAAGGGTGAAATGGATGAAAGGGCGAGCGACACAGGTGATGCTGAGGACAGTGGGATTAAGAAAGACACCGACTCTGAGTTTgataatgtaaaagaaaaaccaGATACGaaagaggaggtgcagaaggagagaactggaaaaaaaagtagCAGGAGGAGCACAGGTAGACCCGTAGGACGGCCTAAGAGAAATGCAGCAGGCAGCTCGGTTCAGTCGGGGGGGAAAGCAGGTCGGCGTTTAAACACTGCAAAATCAAAGGCCCAGAAGTTAAAGATAACCGGTTCCAGCGATGAGGAAAGCGAGGCAGAGCAATCCGACAGTGACATATCCTTTGACTCAGcagaaaaggaagaggaagaagagaaggagacagTGAGGAAGAGCACGGGGAGATCAAGAGGAAGACCCAAAAATAACAGTGACGACGATTTTGACCCAGaagaagaaacaaagaaaaagagataCAGCAGTCAGAGCAGCTCAGGGAAACGTAGAGGAAGACCAAAAAAGAATCAAGCGGTCTGAAAATTCTCCCAACACACAGAGCTGAAAAATTAATTTGGTGTAAGCAGGAAGCCGTAGAAACCTGTATTGATATCTCTCGAGTAGAAAACAATTTGGAATATGAGAAACCCGCCAGCGTCTTTCTGAATGAAATTGTTTTTTACTGTGCAGTAATGGCGGGTCAGTCAGTAAATCACAAGTTATTTGGAAATATATTTAGTAGAGAGTATTGGGTGCATTATAAGAAAGTGACTGAGTGTAGGGAAAGGTAATTGCAAGTTGCCTTTGGAAAATGTGGGTCACCAAATGTAGGAAAAAAAGGctcttatggcgtttttccattacatgggaCCTACTCGACTCGCCTggactcgactctactcgcctcgacgcgctgtgcgtccgttttccattgcagattttagtaccgcctcagcgtggctggtcgtcatagcgactgccgtgggcgtggcttagtagcTTGCTTTTCCCATTGAGATATCcacgactcatttcctggttctccgtctccgtaaacaacatgatatcaaagagatagttaacgtttactgctccagatttcccaccgtggtcagaaagaaca

Function

GO:

id name namespace
GO:0043570 maintenance of DNA repeat elements biological_process

KEGG:

id description
ko03013 Nucleocytoplasmic transport
ko03018 RNA degradation
ko04111 Cell cycle - yeast
ko04113 Meiosis - yeast

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815562.1 True 3031 mRNA 0.48 5 24269684 24278078

Neighbor

gene id symbol gene type direction distance location
LOC120568201 NA coding upstream 2398 24259463 ~ 24267286 (+)
LOC120568200 NA coding upstream 12349 24253388 ~ 24257335 (+)
amotl2b NA coding upstream 22064 24240706 ~ 24247620 (+)
aire NA coding upstream 46086 24220237 ~ 24223598 (+)
rab6bb rab6b,LOC104929189,LOC105028793,LOC104957876,LOC103360106,LOC100708038,LOC101156359,LOC106534664 coding upstream 53229 24209550 ~ 24216455 (+)
tnr tnr coding downstream 96211 24374289 ~ 24545760 (+)
mrps14 mrps14,LOC101476193 coding downstream 382054 24660132 ~ 24662064 (+)
plk3 plk3 coding downstream 398905 24676983 ~ 24685579 (+)
eif2b3 eif2b3 coding downstream 481087 24759165 ~ 24797248 (+)
ptch2 ptch2 coding downstream 530166 24808244 ~ 24837694 (+)
G117523 NA non-coding upstream 10853 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 99731 24169668 ~ 24169953 (+)
G117487 LOC104957881 non-coding upstream 100129 24164854 ~ 24169555 (+)
G117476 NA non-coding upstream 118913 24150458 ~ 24150771 (+)
G117406 NA non-coding upstream 225200 24043969 ~ 24044484 (+)
LOC120568139 NA non-coding downstream 59615 24337693 ~ 24339256 (+)
G117547 NA non-coding downstream 278341 24556419 ~ 24556657 (+)
G117632 NA non-coding downstream 559878 24837956 ~ 24838229 (+)
G117704 NA non-coding downstream 840153 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 847753 25125831 ~ 25130929 (+)
LOC120569114 NA other upstream 214980 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 246025 24022441 ~ 24023659 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other upstream 355186 23912664 ~ 23914498 (+)
G117353 LOC103366712 other upstream 361283 23905870 ~ 23908401 (+)
G117319 LOC101487892,LOC104941256 other upstream 414527 23850879 ~ 23855157 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 291450 24569528 ~ 24578312 (+)
LOC120569045 cacybp other downstream 389801 24667879 ~ 24675754 (+)
selenot1a selenot,LOC103365166 other downstream 584918 24862996 ~ 24870087 (+)
G117664 NA other downstream 672490 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 709421 24987499 ~ 25044057 (+)

Expression


Co-expression Network