snorc



Basic Information


Item Value
gene id snorc
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 23891144 ~ 23896911 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence


>XM_039815581.1
AGATCCTGTTAAGAGCTGGAAATGCAAACCCAATGCATTTTCTCCACAGGAGAACTAACACTGACAGTTTTTCAGGAAGAAAAGCCCATCCTCTCACCACTCGGTTGTAGTACatattgacattaaattagtcaAGGTTTTTAAATCctcaaaaaggaaatgaaacCCGCCACTTCCTTCTGatgaaaagcaacatttttctaAACGCTCACAAAGATCGTCACCATACTGAagctaaaacctttttttaaaagccttcACGGCCAAAGGTGAGTTTTGGCCATCATTAACCTTAGTGAGTCCCCCCGACTTTTTtggaagtgcaatactaaattgTTTATTCATGCATCGGTAACAAAAATCCAGTGATAAAATGCAGTAAAAGTCCTTCTGTATAATGAGTTTACTTGCAACTTTACATGTTGCTGCTAATATTCCTTGTAGTTTCTAAATGTTGATACTTTTAGATCTCAATACGTCCTCCACTACTGCCatcttttgatttaaaaaaaaaaaaaagtaaatgtgttCAATAAATGTCCAGCAGAGACCTTTGTGATGTGACCTGGGCAAGGTCAGTGGCTACCGAATGTTTACCCCTTACGCCCAACTATGTGGCCGTAGGAGTTTGGAGTGGGTGGGCCCTGCGATGATGTGCTCACAAAGTCCACACTGTCCAGACAGTCCTGTGCACACCTAGTCCCACCCCTTCTCTCACCCCTCAGTTGCCTACCTCTCCCCCTGCTGCGCTCCCCTGTactcctctcctgctcctctcccaGGGTCAGCTACTTGTTTGAAGTTTGACGAGTTTTGGAGACGCATTTTGCTCTGTCTGACATCCCTCAGCCACCATGGTTCACAGCAGCAGTATCTGTAGAGTACTCCTCCTGGTGCTCCTCGGCTTCTTGGTAGCCTTTGTACACACAGAGACAGTCGCAGACTCGACAACAAGAGACAACCAGGACACCATGTCTGGAGAACCTCCCAGTGACGTCACCACCAAAGAGCCGTTCCAGGACATGACGGAGCAGTCCTTCACTTTTGACTATGAGTACACCACGCACACGGAGGCCATGGACAAGAATGAGGgagTGCTGGGGCCAGGGGCCATAACAGCCATTGTTATAGCAGTCTTTCTAGGAGCGTCTGTCCTCCTCGCACTCGTCGTCATCACACTAAGGAAGTTCACCGCCTCCTAGAGTGAATACATCCCatcttgtatgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtgtgtgtgtttgtatgtcagCGTTTCTCTTTTGCCTCTCATCTCAATCTCTTAACTCTTTCTTGCAAAAATGCGACTGACTATTTCCAGATTTCCTCCTGGAAGCTCACTCTAATTGTTGCTCAACATGTCCACTTGTTACTGAGGGTATAATGTTAGAAACTGGCTGGCTCTTCCAGTGGAAATCGTAGCATGTCCATGTCATTcactctgtttgttttttgaacTTGCATGCTCTAAAtggtttttaaatgtgtgtgggCCGTTTGTTTCCTGATGGGACGTGTCCTGCATGTGTTTGCTTTTATATTTGAAGAGGAAGTGTGTgcttttgtctttgtgtctttcacAATAATTTTAACTCATGTCTAAAATATTCCCTTGGTGTCACCCATGTACAATTTGTATTCCACCATTTACAAACATTTGTAGAGTGAAAATAAGGAGAAAACATTTTAGAAAGGCTTCTTCGATGAATGTAAACAGGGTAGTTGGGTTGTTTGTTTTGACCTGCATAGCAAATATAAAGATAGAGCGTGGATGAATTTGTGTTTGCACTCAAGTGAGTGTTTGTAGTTTTTTGTCGTTGTTTTATTTACAGTGGGTTGGAAATCATTTtagtacaatttttttttttttttttacacgcctCAGAGTCCTCAGACGTATAGCTGGATGTTGCCATGGTAATTTCACTGCCCGATTATTTTGTGAGATTTAAgttgaataaataaatccaaTTAATCCGATGCCAAA

Function


NR:

description
PREDICTED: uncharacterized protein C2orf82 homolog

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_039815581.1 True 2057 mRNA 0.43 3 23891144 23896911

Neighbor


gene id symbol gene type direction distance location
gigyf2 gigyf2 coding upstream 176 23870051 ~ 23890968 (+)
trnaw-cca_13 NA coding upstream 22819 23868254 ~ 23868325 (+)
glula LOC103366706,LOC100534445,LOC108239682 coding upstream 70703 23816040 ~ 23820441 (+)
bcl2b bcl2 coding upstream 423333 23441591 ~ 23467811 (+)
vps4b vps4b coding upstream 457770 23422716 ~ 23433374 (+)
LOC120567818 gpr55,LOC103396173,LOC103366713 coding downstream 2297 23899208 ~ 23905529 (+)
clcn2a clcn2,LOC102213982,LOC102290034 coding downstream 67038 23963949 ~ 24005011 (+)
LOC120568612 NA coding downstream 157868 24054779 ~ 24057075 (+)
LOC120569088 NA coding downstream 186785 24083696 ~ 24089942 (+)
cdc20 cdc20,LOC102779045 coding downstream 241244 24138155 ~ 24142097 (+)
G117320 NA non-coding upstream 34613 23856129 ~ 23856531 (+)
G117315 NA non-coding upstream 42198 23848687 ~ 23848946 (+)
G117297 LOC104918287,LOC103479586,LOC107686770,LOC108443834,LOC107083372,LOC106929027,LOC108239658 non-coding upstream 145167 23742484 ~ 23745977 (+)
G117228 NA non-coding upstream 324827 23493106 ~ 23566317 (+)
G117221 LOC101467149 non-coding upstream 417460 23472547 ~ 23473684 (+)
G117344 NA non-coding downstream 332 23897243 ~ 23897646 (+)
G117346 NA non-coding downstream 1739 23898650 ~ 23898912 (+)
G117355 NA non-coding downstream 13611 23910522 ~ 23915931 (+)
G117359 NA non-coding downstream 19847 23916758 ~ 23920029 (+)
G117364 NA non-coding downstream 32937 23929848 ~ 23933807 (+)
G117319 LOC101487892,LOC104941256 other upstream 35987 23850879 ~ 23855157 (+)
LOC120567964 dpp6,LOC100710983 other upstream 205340 23592732 ~ 23685804 (+)
kdsr kdsr,LOC102792240 other upstream 450301 23433625 ~ 23440843 (+)
LOC120568311 LOC103368946,LOC103142996,LOC106925933,LOC104929332 other upstream 1209851 22641510 ~ 22681293 (+)
LOC120567968 NA other upstream 1271013 22608049 ~ 22620131 (+)
G117353 LOC103366712 other downstream 8959 23905870 ~ 23908401 (+)
hes6 LOC104918282,LOC104941260,LOC103366710 other downstream 15753 23912664 ~ 23914498 (+)
G117400 LOC104965054 other downstream 125530 24022441 ~ 24023659 (+)
LOC120569114 NA other downstream 152853 24049764 ~ 24054704 (+)
LOC120568789 kiaa0040,LOC102782613 other downstream 672617 24569528 ~ 24578312 (+)

Expression



Co-expression Network