LOC120568221


Basic Information

Item Value
gene id LOC120568221
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24887761 ~ 24892439 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815584.1
CACATCAGTGAGCCCACCTGTAGCCGCTTTTGATTGGTTGTTGAAGCAGCCGCTCGCAGAGAACGTTCCAGTTTCAAAAAGCTGCGGCAAAGCAGAGTCCGTCAGCTCGTCCCATCGCCAGGAGTCATGTGCAACAGAATGAAGTGTGAAGGAACAGGGAAAAGCGCTACTGTTTACTTTGCCGCAGCTGTTATTCTGACGTGTTATTTGGCGCACACGGTAGACTGTAATCGACTGAAGAAAACGGAGTGGCGAAAAGAAGCCGATGCAGCCAGAAGGATAGGTTTCACAGAGGGGCAAATTGTGTTCGGGAGAGTTTTTGAGAAAGGGTCAGGTCTTGGGTCACAAGTCACACACCGGACCAATAAGTCTTCCTCAAACGCATCTGTAGAGGAGGACGCTGCATATCAAGCCGACTCCGCAGGCTGGgtggaaggaaaaaaacaaaatgctaaTTCTAGAGAAGCCGCATGGAAGCGCATGTCTCCCTCCTTGCAGTGCGGTTGGGACCAGTTAAAGTTCAGAGCAGTGGGACCAGGAGCTTTACAGTTTGCTGTGGAACAAGTAAATGCACCTCCGATACCTCTGTCCCAAGTCCCTTCCACCTGTGGCTACAGCATGCAGAGGAACTCTCTTGCGCTTGTCATGTTGGTTCCCTATGATGGCTGCAACGTGGTTCAAGAGGTTGGAAGTTATGTGCTCCCTATGCATTGGCAGGGAAATCCAGTCTCACTCTGGTGTCCcaaacctccaacacctgcacCAACCACTGTACAATCAGCAGCCACAGATCCTCTTCCTTTCTACCCACCGCAAGGTCTACCATATTTCTTTCCTCCATATCCTATCAATCTCCAATATCCAACTCCTGAGCCAGAGATGACTACACAAACGGCTCTCCCTGAACAACCCCAATATCCTTTCAGTCCCAGATCTTTCAATCCCCGTTGTCGAAATCCTGAGCCGGAGACGACGACACCACCAAAGGCTCGCCCTGAACGACCCAATGTCCACTTTCCTCGATATCGTTTCAAACCCCAATATCCAATTCTTGAGCCAGCGACGACAACACCACCAACGGCTCTCCCTGAACATCCCCAATATTTTGATCCCCAATATTTCGATCCCCAATATTATTTTGATTCCCAGTATTATTTCGATCCCCAATATCCTGTCGATCCCCAATATCCAACTCCTGAGCCACTAATGACAACACCACCAACGGCTCTCCCTGAACATCCCCAATATTTCGATCCCCAATATTTCGATCCCCAATATTTCAATCCCCAATATTATTTCGATCCCCAATATCCTGTCGATCCCCAATATCCAACTCCTGAGCCACTAACGACAACACCACCAACGGCTCTTCCTGAACATCCCCAATATCCTGTCGATCCCCAATATCCAACTGCTGAGCCACTAACGACAACACCACCAACGGCTCTCCCTGAACATCCACAATATTATTTTGATCCCCAATATTATTTTGATCCCCAATATCCTGTCAATCCCCAATATCCAACTCCTGAGCCAGTAATGACAACCCCAACTACAACAAAGAAAATGGATACATTTCAACATCACCTTAAATTTCCTTATCATCCTCCTTTCTATCCCCCTTACTCAAGCTACCCTTCTAAAAAATGGTTCTAATAAATGGTTTGAGTAAGTGACCCTgtccagtttttatttttaatttttttttgttgtacttgttAACCCTCAACTACCCCAGAAATTGTCATTTGGTACTGCATGTCTACGTGAGGAACAGATATTAAAAGGCTTTACTCTTGA
>XM_039815585.1
AGAACCACATCAGTGAGCCCACCTGTAGCCGCTTTTGATTGGTTGTTGAAGCAGCCGCTCGCAGAGAACGTTCCAGTTTCAAAAAGCTGCGGCAAAGCAGAGTCCGTCAGCTCGTCCCATCGCCAGGAGTCATGTGCAACAGAATGAAGTGTGAAGGAACAGGGAAAAGCGCTACTGTTTACTTTGCCGCAGCTGTTATTCTGACGTGTTATTTGGCGCACACGGTAGACTGTAATCGACTGAAGAAAACGGAGTGGCGAAAAGAAGCCGATGCAGCCAGAAGGATAGGTTTCACAGAGGGGCAAATTGTGTTCGGGAGAGTTTTTGAGAAAGGGTCAGGTCTTGGGTCACAAGTCACACACCGGACCAATAAGTCTTCCTCAAACGCATCTGTAGAGGAGGACGCTGCATATCAAGCCGACTCCGCAGGCTGGgtggaaggaaaaaaacaaaatgctaaTTCTAGAGAAGCCGCATGGAAGCGCATGTCTCCCTCCTTGCAGTGCGGTTGGGACCAGTTAAAGTTCAGAGCAGTGGGACCAGGAGCTTTACAGTTTGCTGTGGAACAAGTCCCTTCCACCTGTGGCTACAGCATGCAGAGGAACTCTCTTGCGCTTGTCATGTTGGTTCCCTATGATGGCTGCAACGTGGTTCAAGAGGTTGGAAGTTATGTGCTCCCTATGCATTGGCAGGGAAATCCAGTCTCACTCTGGTGTCCcaaacctccaacacctgcacCAACCACTGTACAATCAGCAGCCACAGATCCTCTTCCTTTCTACCCACCGCAAGGTCTACCATATTTCTTTCCTCCATATCCTATCAATCTCCAATATCCAACTCCTGAGCCAGAGATGACTACACAAACGGCTCTCCCTGAACAACCCCAATATCCTTTCAGTCCCAGATCTTTCAATCCCCGTTGTCGAAATCCTGAGCCGGAGACGACGACACCACCAAAGGCTCGCCCTGAACGACCCAATGTCCACTTTCCTCGATATCGTTTCAAACCCCAATATCCAATTCTTGAGCCAGCGACGACAACACCACCAACGGCTCTCCCTGAACATCCCCAATATTTTGATCCCCAATATTTCGATCCCCAATATTATTTTGATTCCCAGTATTATTTCGATCCCCAATATCCTGTCGATCCCCAATATCCAACTCCTGAGCCACTAATGACAACACCACCAACGGCTCTCCCTGAACATCCCCAATATTTCGATCCCCAATATTTCGATCCCCAATATTTCAATCCCCAATATTATTTCGATCCCCAATATCCTGTCGATCCCCAATATCCAACTCCTGAGCCACTAACGACAACACCACCAACGGCTCTTCCTGAACATCCCCAATATCCTGTCGATCCCCAATATCCAACTGCTGAGCCACTAACGACAACACCACCAACGGCTCTCCCTGAACATCCACAATATTATTTTGATCCCCAATATTATTTTGATCCCCAATATCCTGTCAATCCCCAATATCCAACTCCTGAGCCAGTAATGACAACCCCAACTACAACAAAGAAAATGGATACATTTCAACATCACCTTAAATTTCCTTATCATCCTCCTTTCTATCCCCCTTACTCAAGCTACCCTTCTAAAAAATGGTTCTAATAAATGGTTTGAGTAAGTGACCCTgtccagtttttatttttaatttttttttgttgtacttgttAACCCTCAACTACCCCAGAAATTGTCATTTGGTACTGCATGTCTACGTGAGGAACAGATATTAAAAGGCTTTACTCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815584.1 True 1800 mRNA 0.47 4 24887766 24892439
XM_039815585.1 False 1775 mRNA 0.47 4 24887761 24892439

Neighbor

gene id symbol gene type direction distance location
LOC120568223 NA coding upstream 10802 24875001 ~ 24876959 (+)
kif2c kif2c,LOC101470919 coding upstream 25816 24853794 ~ 24861945 (+)
ptch2 ptch2 coding upstream 50067 24808244 ~ 24837694 (+)
eif2b3 eif2b3 coding upstream 90513 24759165 ~ 24797248 (+)
plk3 plk3 coding upstream 202182 24676983 ~ 24685579 (+)
zgc:153615 schip1,LOC104951462,LOC103396042,LOC100710109,LOC101472499 coding downstream 2116 24894555 ~ 24906946 (+)
LOC120568308 NA coding downstream 15398 24907837 ~ 24911335 (+)
LOC120568131 otol1,LOC104951468 coding downstream 44520 24936959 ~ 24939879 (+)
rc3h1b rc3h1 coding downstream 73226 24965665 ~ 24980880 (+)
extl2 extl2 coding downstream 99705 24992144 ~ 24996202 (+)
G117632 NA non-coding upstream 49532 24837956 ~ 24838229 (+)
G117547 NA non-coding upstream 331104 24556419 ~ 24556657 (+)
LOC120568139 NA non-coding upstream 548505 24337693 ~ 24339256 (+)
G117523 NA non-coding upstream 628930 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 717808 24169668 ~ 24169953 (+)
G117704 NA non-coding downstream 225792 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 233392 25125831 ~ 25130929 (+)
LOC120568901 NA non-coding downstream 889736 25782175 ~ 25793191 (+)
LOC120568900 NA non-coding downstream 979890 25872329 ~ 25873402 (+)
LOC120568898 NA non-coding downstream 988065 25880504 ~ 25888841 (+)
selenot1a selenot,LOC103365166 other upstream 17674 24862996 ~ 24870087 (+)
LOC120569045 cacybp other upstream 212007 24667879 ~ 24675754 (+)
LOC120568789 kiaa0040,LOC102782613 other upstream 309449 24569528 ~ 24578312 (+)
LOC120569114 NA other upstream 833057 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 864102 24022441 ~ 24023659 (+)
G117664 NA other downstream 58129 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 95060 24987499 ~ 25044057 (+)
LOC120568894 LOC102789372,LOC104966552 other downstream 850888 25743327 ~ 25773468 (+)
LOC120568895 NA other downstream 881338 25773777 ~ 25793954 (+)
G117829 NA other downstream 937325 25829764 ~ 25830695 (+)

Expression


Co-expression Network