LOC120568222


Basic Information

Item Value
gene id LOC120568222
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24870002 ~ 24874965 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815586.1
TTCGTTTCACCTGGATAATGTCAAGGGTGCTATCAGAGACAGCAAGGTACAAAGGGTTACTGACAACACAGCAAGTGGGACTCATTGAGAGGATACCAAAGGGCTGTCCACAGTCTGTCAGTGACCCACCCACCTATTGTATCAGAGCAGCAGGAGTTCTGAGGTACAATCGGGAGTCTGACAACCACAGgataaacttaaccattcttcCAGAGTCCCAGCCTCTGACAGAATACCCAGTGAAATGTGAATTCTGTGGACTAAAGGCCCAACCTTCACTAGATCTTCCATGGGCACAGGGGCCAGAGACCGTGTCACTCTTCTGCTGTGTCCAGCGGCAGCAGCTGTATAAGATGCTGGTGAAGTGGAGGTGTTTGGTTGAGAGGAGCTGTGACCTGAGGGCTAATACTCCAACAACATCATCAGGAGACCAGCCAGCCACAGAGATGAAGGAGCTTCTCTTCCAAGGCAAAGAGATGGAGGATTACAACAAGTTTATCCTGGATTTACCGAGTGGACTTGGagaaCAATCAGAATTGAGGATCTACCAGGATGTCTCAATCCAACTACCAGAAACCTTTGTCCCAACATCAAAGGTCCTCAGCTTCCGGCTCTCTTGTGCTCCAGGACAAGGATGCTGGACAGTGTATCCTTGTAGCGCAACTGAGAAGCACTTGAAAATAAAAGAGCAAGAGGAGCAGGTGTTAGTCCCTTTTTGTGACCACAAGCCACTTCAGTTTGGCATATGTCATTATCAGGATGGGGCAGAATTTCTCAAGAAGTATTACTCCAATGGCATGACATTTCTTACAATGTTCCCTGATGGCTCTGCTCAGGTCTTCTATCCCTCAGGCCTCTTGGCTCTCGTTGTCGTGGTCACCGAAGAAAAGGGTAGGGTCTGCATCGTGTATGATGATTGCATTGCTTCCTATCAACCAATTAGAGCAATGTTCCAGTCTGATGGCAGGGTGACGTGTTATCACAGCAATGGAAACATATGGCTGACCTTAAACAGTTCAGGCGGTCAGTGTTTGGATGAGGCGGGTGCCAGGGTTCGTCGGTGGAGATGGAGCAGACTGAGCATGACTCCCACTCCCCTGCATCCCGTCTTCCTGTCCCTTAACAAAACTGTCGGGGTCCGAGTCCTCGAGAAGGAACAAGTGTTTGTCTCTTTTCTGGCAAAAGGCCAACAGGCAAAACTCAGTGTGGGTACCTGCTGCGCTCAGgGTGAATGTAGAACAGATGGGTCTAGTTCAGGGCCATCAGTATTAAAGGAGGAGCTGTTTGTGTTGGCAGCCAGGATTAGGATCAACACGGCCCTTCGGCACCTCAACCAGTGCCTGATGACACCCTCACATCCCCGGCTGCCACCTCCAAGCTTTTCAGTCTAATGAGACTTAACTTAGCTTAAATGTTTATCCTATGGATGAAGAAAGAGCCTTCATCCATAGGTGTCTTCAGTCTTTGATGTACCAGTAATAAAGTACACAGTGACGTGATAACAGCAACTATGCTATGGCATAAAGACAAAGTCACACTCAAaatagcggttaaaatagttttttcaaaatgtacatgtttgtttttgtcattttttttttttatttgatttggaTACCACAGTAACTAAAAGGCAATCAGAGGGACAAAATAAAGGAACAAACATTGGCATTATAGCAAATGTTTTTCTACACAACTTAATGGCTCTTTTCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815586.1 True 1713 mRNA 0.46 11 24870002 24874965

Neighbor

gene id symbol gene type direction distance location
tnn tnn coding downstream 219814 24582892 ~ 24650188 (-)
agxtb LOC102295305,LOC101480149,LOC103360104,LOC102780675 coding downstream 701359 24164841 ~ 24168643 (-)
thap4 thap4 coding downstream 705280 24160863 ~ 24164722 (-)
elovl1a LOC103360100,LOC100706973,LOC101078198 coding downstream 722892 24142316 ~ 24147110 (-)
ppp1r7 ppp1r7,LOC102778584 coding downstream 788762 24072721 ~ 24081240 (-)
arl14 LOC104951466,LOC103365161 coding upstream 45465 24920430 ~ 24921389 (-)
ppm1la LOC103365160,LOC100694563,LOC104951467,LOC101471328 coding upstream 49615 24924580 ~ 24933813 (-)
tal1 LOC100710637,LOC101065935,LOC105935913 coding upstream 68695 24943660 ~ 24949323 (-)
si:ch211-13f8.1 kiaa1614,LOC102789281 coding upstream 75533 24950498 ~ 24964964 (-)
zgc:110366 LOC100711167,LOC101466938,LOC102200702,LOC102788500 coding upstream 112624 24987589 ~ 24992610 (-)
G117716 NA non-coding downstream 1571 24863009 ~ 24868431 (-)
G117616 eif2b3 non-coding downstream 72746 24787583 ~ 24797256 (-)
G117605 NA non-coding downstream 140780 24728871 ~ 24729222 (-)
G117596 plk3 non-coding downstream 183370 24682857 ~ 24686632 (-)
G117589 cacybp non-coding downstream 194248 24673886 ~ 24675754 (-)
G117718 NA non-coding upstream 1121 24876086 ~ 24892459 (-)
LOC120568137 NA non-coding upstream 148436 25023401 ~ 25048014 (-)
G117786 LOC103359187,LOC104951523,LOC101067506 non-coding upstream 406443 25281408 ~ 25335213 (-)
G117788 NA non-coding upstream 475261 25350226 ~ 25373646 (-)
G117812 NA non-coding upstream 718078 25593043 ~ 25593585 (-)
G117560 NA other downstream 333506 24499380 ~ 24536496 (-)
LOC120568990 LOC101487892,LOC104941256 other downstream 1013381 23851073 ~ 23856621 (-)
LOC120568062 LOC108239646,LOC104957657,LOC101467149,LOC102793932,LOC103364894 other downstream 1378390 23468620 ~ 23491612 (-)
G117259 vps4b other downstream 1439010 23430366 ~ 23430992 (-)
LOC120569135 ttc39c,LOC102790819 other downstream 1508422 23345718 ~ 23361580 (-)
G117732 NA other upstream 47238 24922203 ~ 24923318 (-)
camk2n1a camk2n2 other upstream 1440805 26315770 ~ 26319595 (-)
G118175 NA other upstream 1786656 26661621 ~ 26665952 (-)
cirbpa cirbp other upstream 1944873 26819838 ~ 26824570 (-)
LOC120568986 epha4,LOC100711706 other upstream 2768362 27643327 ~ 27675360 (-)

Expression


Co-expression Network