LOC120568223


Basic Information

Item Value
gene id LOC120568223
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 24875001 ~ 24876959 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815587.1
CCTGTAGCCGCTTTTGATTGGTTGTTGAAGCAGCCGCTCGCAGAGAACGTTCCAGTTTCAAAAAGCTGCGGCAAAGCAGAGTCCGTCAGCTCGTCCCATCGCCAGGAGTCATGTGCAACAGAATGAAGTGTGAAGGAACAGGGAAAAGCGCTACTGTTTACTTTGCCGCAGCTGTTATTCTGACGTGTTATTTGGCGCACACGGTAGACTGTAATCGACTGAAGAAAACGGAGTGGCGGAAAGAAGCCGATGCAGCCAGAAGGATAGGTTTCACAGAGGGGCAAATTGTGTTCGGGAGAGTTTTTGAGAAAGGGTCAGGTCTTGGGTCACAAGTCACACACCGGACCAATAAGTTGTCCTCAAACGCATCTGTAGAGGAGGACGCTGCATATCAAGCCGACTCTGCAGGCTGGGTGAAAGGACGAACACCACATGCTAATTCTAGAGAAGCCGCATGGAAGCGCATGTCTCCCTCCTTGCAGTGTGGTTGGGACCAGTTAAAGTTCAGAGCAGTGGGACCAGGAGCATTACGGTTTGCTGTGGAACAAGTCCCTTCCACCTGTGGCTACAGCATGCAGAGGAACTCTCTTGCGCTTGTCATGTTGGTTCCCTATGATGGCTGCAACGTGGTTCAAGAGGTTGGAAGTTATGTGCTCCTTATGCATTGGCAGGGAAGTCCAGTCTCACTCTGGTGTCCcaaacctccaacacctgcacCAACCACTGTACAATCAGCAGCCACAGATCCTCTTCCTTTCTACCCACTGCAAGGTCTACCATATTTCTTTCCTCCATATCCTATCAATCCCCAATATCCAACTCCTGAGCCAGAGACTACTACACCAATGGCTCTCCCTGAACAACCCCAAGATCCTTTCAATCCAAGATCTTTCAATCCCCAATATCAAATTCCTGAGCCAGGGACGACGACACCACCACCAACTGTCCCTGAACGTCACCGCGTCCACTTTCCCCATTATTTTTACAATCCCCAGTATCCTTTCTATCCCCAACATCCAACTCTTAAACTAGAGACGACAACGACACCACCACCAAAGGCTCGCCCTGAACGACCCCATGTCCCTCGATATCCTTTCCATCCCCAATATCCGACTCGTAACCTAGAGATGACACCACCACCAAAGCCTTGCCCTGAACGACCCCATGTATACTTTCCTCGATATCGTTTCAATCCCCAAAATCCAACTCGTAAACTAGAGATGACGACACCACCAACGTCTCGCCCTAAACGACCCAATGTCCGCTTTGCTCAATATCCTTTGCATCCCCAATATCATTTCAATCCCTGATATCCAACTCCTGAGGCAGAAATGACCCCAACTACATCAAAGAAAATGGCTCAACTTCAGCACGTTCACCTTAAATTTCCTTATATCCTCAGTTCTATCTCCCTTATTCAGGCTACCCTTCTAATAAATGGTTTGAGTAAGTGACTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815587.1 True 1458 mRNA 0.49 4 24875001 24876959

Neighbor

gene id symbol gene type direction distance location
kif2c kif2c,LOC101470919 coding upstream 13056 24853794 ~ 24861945 (+)
ptch2 ptch2 coding upstream 37307 24808244 ~ 24837694 (+)
eif2b3 eif2b3 coding upstream 77753 24759165 ~ 24797248 (+)
plk3 plk3 coding upstream 189422 24676983 ~ 24685579 (+)
mrps14 mrps14,LOC101476193 coding upstream 212937 24660132 ~ 24662064 (+)
LOC120568221 NA coding downstream 10802 24887761 ~ 24892439 (+)
zgc:153615 schip1,LOC104951462,LOC103396042,LOC100710109,LOC101472499 coding downstream 17596 24894555 ~ 24906946 (+)
LOC120568308 NA coding downstream 30878 24907837 ~ 24911335 (+)
LOC120568131 otol1,LOC104951468 coding downstream 60000 24936959 ~ 24939879 (+)
rc3h1b rc3h1 coding downstream 88706 24965665 ~ 24980880 (+)
G117632 NA non-coding upstream 36772 24837956 ~ 24838229 (+)
G117547 NA non-coding upstream 318344 24556419 ~ 24556657 (+)
LOC120568139 NA non-coding upstream 535745 24337693 ~ 24339256 (+)
G117523 NA non-coding upstream 616170 24257554 ~ 24258831 (+)
G117488 NA non-coding upstream 705048 24169668 ~ 24169953 (+)
G117704 NA non-coding downstream 241272 25118231 ~ 25118502 (+)
LOC120568228 NA non-coding downstream 248872 25125831 ~ 25130929 (+)
LOC120568901 NA non-coding downstream 905216 25782175 ~ 25793191 (+)
LOC120568900 NA non-coding downstream 995370 25872329 ~ 25873402 (+)
LOC120568898 NA non-coding downstream 1003545 25880504 ~ 25888841 (+)
selenot1a selenot,LOC103365166 other upstream 4914 24862996 ~ 24870087 (+)
LOC120569045 cacybp other upstream 199247 24667879 ~ 24675754 (+)
LOC120568789 kiaa0040,LOC102782613 other upstream 296689 24569528 ~ 24578312 (+)
LOC120569114 NA other upstream 820297 24049764 ~ 24054704 (+)
G117400 LOC104965054 other upstream 851342 24022441 ~ 24023659 (+)
G117664 NA other downstream 73609 24950568 ~ 24954247 (+)
fgf12a fgf12,LOC100711708,LOC108245531,LOC107083782,LOC107384013,LOC103396031,LOC103365152,LOC103148287,LOC101467833,LOC106535044,LOC102236041,LOC105935916 other downstream 110540 24987499 ~ 25044057 (+)
LOC120568894 LOC102789372,LOC104966552 other downstream 866368 25743327 ~ 25773468 (+)
LOC120568895 NA other downstream 896818 25773777 ~ 25793954 (+)
G117829 NA other downstream 952805 25829764 ~ 25830695 (+)

Expression


Co-expression Network