mmp14b (LOC103360306,LOC103396588)


Basic Information

Item Value
gene id mmp14b
gene name LOC103360306,LOC103396588
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12691995 ~ 12704763 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815601.1
GGAGTATCAAACTACCACGTCTGCAGCGGTgagagaggggaagaggagAGGGGATCAAAATAAGCCGACTGGAGGACAGAGAAGAGAGGACAGCGGAGGAATTAAGACTGCTTCATGAAACCAAAGTCGGCTGCAACAGCTGGAGCAAAGCGCAAGCTGAATTTGGACATAAAATACGCACAGCCTGCAGCTCCAGAGGCCCCCATTCAAACTTCCTGCTTCCAGTAACGTCTGATAATTTGGTCAAAACTCACCAAAACGCGAGAAGAATGCACAGATTGGACAAATACCTCTCGTGGTTAAGGTAACTCAAGTAACAATTTGCAGAGACGCAAACTGGAAACTCTTTTTGTGCTTTGCGAGACGATCTCGGTTGCCGCGTTTTCGTTTAGGGGATACGTTTTTTCACAGACAATGTTTTGACAAATAGTGAAGATTGCGAAAACTGTTACAGAAAGTTCGGTCcgattttgtattgtattttggaGAGACAAGTGATGGCACCAGAGCTCAAATCGCTTGTCCGACTGCTGTTGCTGGCGGTGGTGTGGGAGCTGAGCGCACAGGGAGCGACGGAGCGACAAGTCAATCCAGAGTCATGGCTGCAGCAGTATGGTTACCTGCCACCGGGGGATATGAGGACCCACGCACTCCGCTCCCCTCACTCCGTCTCCTCCGCCGTCGCCGCCATGCAGAGGTTCTACGGCCTCACCATCACCGGCACCTTTGACACCAACACGATTGAGGCCATGAAGCGACCACGGTGTGGCGTACCAGATAAGTTTGGTTCCGAAATGAAGAGCAACTTGAGGAGGAAGCGATACGCCATCCAGGGTCTGAAGTGGAACAAGAATGACATCACTTTCTCTATACAGAACTACACTCCTAAGGTGGGTGAGTATGAGACCCACGAGGCCATCAGGAAGGCCTTCAAGGTGTGGGAGAGCGTCAGCCCGCTTCGCTTCCGGGAAATCCCCTACAGCTACATACGGGACAAAGTGGAGGAGTTTGCCGACATTATGCTCTTCTTCGCCGAGGGTTTCCATGGTGACAGCAGCCCGTTTGATGGCGAGGGTGGCTTCCTGGCGCATGCCTATTTCCCTGGTAATGGCATCGGTGGGGACACCCACTTTGATGCAGCTGAGCCATGGACTGTTGGAAACAAGGATCTTACAGGTAATGACATTTTCCTGGTTGCGGTCCATGAACTGGGCCATGCTCTGGGTCTGGAGCACTCCACTGACCCTTCAGCCATCATGGCACCCTTCTACCAGTGGATGGACACCGAGAACTTTGAACTTCCTGACGATGATCGCAGAGGCGTACAGCAACTTTATGGGTCTGGATCAGGCCCCCATGTAACACCCCGTATTCCGAACCACAACCCTGAGCCCACATATTCACCAGAAAAGCCTCGCTTTGGCCCCAACATCTGCGACGGACACTTCGACACCATCGGCATCCTCAGAGGAGAAATGTTTGTGTTCAAGgaTAAATGGTTCTGGAGGGTACGTAACAACCATGTTTTGGATGGATATCCCATGCCGATTGGTCACTTTTGGAGGGGATTGCCCACTCATATCAATGCCGCTTTTGAAAGGGAAGATGGGaaatttgttttctttaaagGTGACAGGTATTGGGTGTTCACTGAATCAATTCTGGATCATGATTCCCCTAAGAGTCTAAAGGAAATGGGCACTGGGCTTCCCAAAGATCGAATAGATGCTGCTCTCTTCTACACTCCCACTGGACAGACATTCTACTTCAGAGCAAACAAATATTACCGTTTCAACGAAGATACACAAAGCGTTGATGATGGCTATCCCAAACCTATTAGTACGTGGCAAGGAGTGCCTGATAACATCAAGGCAGCCTTCATGAGCAAAGATCAAGCGTACACCTACTTCTACAAAGCCAACAAGTACTGGAAGTTCAACAACCAGATGATGCGTGTGGAGCCGGGTTACCCCAAATCAGCTCTTCGTGACTGGATGGGCTGCCCTAACGAAGACCCCAAGACGGACGGAGGGAGAGGCGGAGGCGGACACGACAAGGAcaaggagagggagaaggacAAGGAGCGGGAGGATAAGGACAGAactagagatagagagagggaaagagagagggagaaggagccAGACAAGGATACGGAGGTGATCATTATTGAGGTGGATGAGGAGGAAGGTGTAGGTGGTGGCAGTGGAGCAGCGGTGGTGGTGTTGCCACTGTTCCTGTTAGTGTGTGTGATTGCGACGCTGGCTGCCTTGGTGTTTTTCCGTCAGTATGGTACCCCGCGCCGACTCCTCTACTGCCAACGATCTCTACTGGACAAGGTGTAGacggaggagggagggaaagacagggagagaaagagaaaaaaaaaaaaaaaaaaaaaaaaaaagtggaaggaAATGTTGAACAGAGATAATGAGAGCAGAAGCGATACAACTGGAGAAATAGCAGAAGGAAAAGCACCAGACTTGCATTTTCTTAAATATTCGTACCACTGCCAGATTCCTTTTGCTCTGTCTCTCAACCACTCCATTcttccacttttttttctctcccttcttCCTCCACCTCTCCCCTCGTGGTAACTGACGCCAGCTCATTGCTGTTTGTTTTAGCCTTTTTCAATgtcttatttttaattttttttttgtcagtggtCAGTGTTTGTGTCCTTGGGAATTTCCGCTTCGAACCTGCATCTCCATGACGCCCATTCTAGCATGTCCCTTTGAGTAATTAAAGAGCGGGTTTGATCGTTCGTCCCCCTTGTTAACTTGCACACACTCGCATAAGCACACACATTTCACTCATTGTGTTTCTTCCAGTAAAGTAACATGTCAGAGCCAGTATGGACCACGAAAGGGAAACCAAACATTATCTGAAGCCCTTATGAAGCATGAGATACGCTCATATTGGAGTAAAGCAGTAAATACGactgtcttttccttttttatatcAATGTCTTTAgtgcagattattattataaatgatgttgtcattattattatgactaatactattattgttgttgtcctACGTGTAAAGaatgtgtttttgtacattGTCATTAAAAAGTCCTGCTGGACAGTGACATACAGTTTTGAAAGTGGCCTTAATTTTATATGTGTGGGGACAGTGAATGGGGAAGGGGGTTATGTATTCTTGAAACttgattgttctttttttttttttaccttgaatCCAtctcaaatgaaaataaattgaaGATCTGAAAATGA

Function

NR:

description
matrix metalloproteinase-14-like

GO:

id name namespace
GO:0042074 cell migration involved in gastrulation biological_process
GO:0051216 cartilage development biological_process
GO:0009948 anterior/posterior axis specification biological_process
GO:0006508 proteolysis biological_process
GO:0030010 establishment of cell polarity biological_process
GO:0060027 convergent extension involved in gastrulation biological_process
GO:0031012 extracellular matrix cellular_component
GO:0005509 calcium ion binding molecular_function
GO:0004222 metalloendopeptidase activity molecular_function
GO:0008270 zinc ion binding molecular_function

KEGG:

id description
K07763 MMP14; matrix metalloproteinase-14 (membrane-inserted)

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815601.1 True 3257 mRNA 0.47 10 12691995 12704763

Neighbor

gene id symbol gene type direction distance location
c11h14orf119 LOC104956585 coding downstream 27294 12663195 ~ 12664701 (-)
dhrs1 dhrs1 coding downstream 64663 12622745 ~ 12627332 (-)
homeza homez coding downstream 70286 12616620 ~ 12621709 (-)
psmb11a psmb11,LOC102789740,LOC102210751 coding downstream 137369 12553568 ~ 12554626 (-)
psmb5 psmb5,LOC108238608 coding downstream 138424 12546361 ~ 12553571 (-)
sall2 LOC104956582,LOC103360303 coding upstream 1411 12706174 ~ 12715746 (-)
si:rp71-1g18.1 NA coding upstream 64606 12769369 ~ 12774763 (-)
casq1a LOC104956576 coding upstream 73577 12778340 ~ 12786678 (-)
LOC120568729 LOC104956573,LOC103360293 coding upstream 97143 12801906 ~ 12803940 (-)
LOC120567650 LOC100690777,LOC102314387,LOC101469034,LOC102212652 coding upstream 134820 12839583 ~ 12844436 (-)
LOC120568043 NA non-coding downstream 91403 12585529 ~ 12600592 (-)
G113828 NA non-coding downstream 335104 12356334 ~ 12356891 (-)
G113810 NA non-coding downstream 335914 12353843 ~ 12356081 (-)
G113806 NA non-coding downstream 462657 12228979 ~ 12229338 (-)
G113799 NA non-coding downstream 483025 12208532 ~ 12208970 (-)
G113933 NA non-coding upstream 52888 12757651 ~ 12759273 (-)
G113945 NA non-coding upstream 85076 12789839 ~ 12793027 (-)
G114129 col6a1,col6a2 non-coding upstream 248617 12953380 ~ 13167706 (-)
LOC120567923 NA non-coding upstream 318507 13023270 ~ 13039958 (-)
G114131 NA non-coding upstream 376851 13081614 ~ 13084384 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 83426 12601180 ~ 12608569 (-)
G113805 NA other downstream 473728 12218062 ~ 12218267 (-)
LOC120567758 NA other downstream 1803043 10887007 ~ 10888952 (-)
brinp2 brinp2,LOC103369811 other downstream 2424917 10040686 ~ 10267078 (-)
LOC120568397 NA other downstream 3181498 9400787 ~ 9510497 (-)
LOC120568934 LOC104956577 other upstream 55985 12760748 ~ 12768625 (-)
LOC120568578 wdr48 other upstream 261703 12966466 ~ 12975328 (-)
G114152 NA other upstream 379798 13084561 ~ 13088563 (-)
dis3l2 dis3l2 other upstream 764768 13469531 ~ 13482225 (-)
tfr1a NA other upstream 1245108 13949871 ~ 13968811 (-)

Expression


Co-expression Network