tox4a (LOC103360300)


Basic Information

Item Value
gene id tox4a
gene name LOC103360300
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 12753035 ~ 12759269 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815616.1
gttaaagtaattgttttgtaatgtatCGTATGATAACCTGAATTTAGTTTATCTCTCACTTATGTCCGTAGGTGACGCTAGTGTTTCATGAAGCATTGGCAATTTCCCCCACAGTCCGTGAATCTAacacactagctagctagctagctagctattcgGTTCGGAAATGCCATGGTGGTAGTGTAACAGCAGCATACGAATGGGGTTGTGTTGGGCCTCCAGTAAGCTTTGCGCCCCGGGGAACTAATGCGTACTATTTTGTCAtctttgtgattatttggctgCTAACCTCTTCAAATTACCCTCGTCCCAGTTTTCCCTAGGGCTTCAAAGGTATCCTAGGATCATCTCATCGATCATAACATAATGCTAGCCagagattagctagctagccgctaGCAGCTTTAGTTAATGTTCGGATAGTTGACCTAAATGGGTTCGGTTAAGAACCCCCCCTTTTCAACAAAGTAGCTATACAACGCGTGTGATAGTTCGTTTAGAGTAAAACATCTCAAAATGGACCTTAATTTTTACTCTGCCCTTTCGGATGGTTGTGGTCAAAATGTTGATTCGGAGTTTTTGGACACCCAAGCGTATGGCGGATACACTGAGGAAAATAAGTTTCCAGAAGGCGGCGACAGTTATCTCACCATCAGTGGAGCGGGCCACCCTTTTTTGTCCGCTGAGCAAACATTCCATACTCCCAGTCTCGGGGATGAGGTTTTTGAGATACCCCCTATCTCCCTTGATCCTGACCCAACTCTTAGCATCAGTGATGCAGTGTCCCACTTTGAGTTGACAGATGGGTCAGACGGTACCGGGGGAACTTCAGGCTCCCGTAGCCTTGTTAGCAACCTGGTAGTGGAGGCCAATGACCCTTCCTTTGCTTCCACCTTTGTGAACTCTGGGTCTCAAGGTCTTGAACAGCTGAACCTTGGGGCCATGGGCCAGGCTGGAGGGGGAGCCCTGCTGAGCTCCTCTGCTCTGGAACTGGGGAATTCCAGTGGTTCACATTTCAGCAGTTCTTCCCCGATGACCATTGATGTCCAACTTGGTGACATCAGTCATGGGCTTTTGGGAAGCAGCCAGTTGAGCACTATTAACCCGTCTGAGCTGGCACTGGGTCTTGGGGGTGATAACATTGGGCATCTTTCAGAGACGCACGAGCAGCCGCTGTCAGCAACACCATCGCCAGCGGGCTCCCTGCAGGACGAGGACATGGATGACTTCAAGAGAAGTGTGCTGGTGGACTCCCCCATGTatctctcctcttccctctccCACATGTCCTCCCACCCAGCTCCTACATCTTCATTGTCTCCAGCTACGGCCAGGAGGGGCGGGGGGAAGCCAGCCACGCTGGCCTCAGTGACTGGGGCGGTGGGCActaagaaaggaagaaagaagaaagaccCAAATGAACCACAGAAGCCAGTTTCAGCGTACGCGCTGTTTTTCAGAGACACCCAGGCAGCCATTAAGGGCCAGAATCCCAATGCCTCTTTTGGGGAGGTGTCAAaaattgtggcctccatgtggGACAGCCTGGCAGAGGAACAGAAACAGGTGTataagagaaagacagaagtAGCCAAAAAGGAGTATTTGAAAGCACTGGCAGCTTATAGAGCCAACCAGCTCACGCAGCCAGCCACTGAGGAGATGGAGACCGCTCCTTCACCACCTCCAACGGCGGTCCATCCAACGCCCGCAGCCCTTCCCTTTGCTGGTCCCCAGGTCGTCCGCCCGGCGACCACCAACCTGGAGGAGAACACCATCACAAACATTTGCGCCTCCAACATCATCCTGGACGTCCCAGAGAGGGCCACACGTTCCCGCACAGGGGCCAACAAAGTCTCTGCCCCAGCGGTTGCGGTACCTCCGGCCCAGACCATCACCAAGATCATAATCCCAAAGCACATGTTGCAGGCGGGGGGCCAGTTGGTGACTGTGTTGCCCGGAGGGGTCCGCACTTTGCAGCCCACACTGTTAGTGTCGGGTGCCTCTCGTCAGCCACCTCCGCTGCAGCAGATGCAGAACGCACCGCCTCCGCCGCGGCTCCAGCAAATGGCGCCAGCACCTCCACCCTTACAGGCCAAGCCCCGCGAAGGAAGCACCACGCTAGGTCTGCCTGTGTCCGTCACGGCTAcacctccacctccactccAGATAAAAATAGTTCCCGCGTCCTTGCAGAGCAAAGAGGCCCTGCCGATTATCGTCCCTAATACAGTGGCCGTGTCATCTACTGCGACTACATCTGCCCAGTCTGCACCCATCGTGTCGGTGCAGGTGGTGAATTCTACGGACACGTCAGCCAGTACAGACGACGATGAAGTTACAGAAGTGCTGCATTCAGAAGAGgaaGAGATGGAGGTGAACGGGCCCGGTGATGCCGCGACgatgaggagtgtgtgtgtgaggacggGATGTAACAACCCAGCCGTAGAGAGTGACGACTGGGACAAAGAATACTGTAGCAACGAATGTGTGGCTACTCACTGCAGaGCGATATTCAAGGCGTGGTGCTCAATCAGGAATCAGACCATGGGAATAGTGAAATAAGGAGCAGCTGCTACCAATCCCATCGACAGAATACTTGTTTCTCCACTAGAAACAAGTGTCAGTAGTTGAAGGACCGATGCAGAAGTGGTGCGATGCAGAAGTGGTGCAACACAGAAACGTCAAAAAATGCATTTCACCACAGTTCTCTCCCTGTTTGGTACATGTACTGTAGGTTTGACAGTTGCTGTTCAGGACAATAAACGAGTAACGTTGCTAAATAACACTAAAGTAGGACAGCGACTCCACGTTAGTATTTTAGCACACAGACTACTCTAATGAAAGGTAAGGATAATAATGTAGTGGTATGTTTGATTATGTATACAGCCCTTAGTCAGGCATCGAGGGACTTCAAGGCAGCTAGAGAAAAGATCAGAACAATGAAGTGTCAAAGTTGGTCGAGACAATGGTAttctattaattattttttttttaactaaagccCAACACAGGTCAGTACTTGTTTACTGTAAATTGTTGGAGTCGGTTTCTCGAAACGCTCTGACAAAGAAcatttcaacctttttttacaGCAGTTTGAGACATTGTACAATGCTTGCTGATTTGAAATCCATGCTCTgaaatgtttctgtgtttcaggTCTCTAAGCATGTGAAACGATTCCTTATtacaaataaaggctgaaataTGCTCAAGTTTGAGTGGGAAGTCTGTATCACTGTACAGCTTGTATTTGTTCTGAGAATAGTTGCCTAAGTTTAATATTGCCTTCATTTTTTTGTAACACATTCTGTTCAGAtcattgttgttaaaaaatTCTTGACTTTCATGTTTTCTTAATAAATGAGCAGTTTTTCTGAA

Function

NR:

description
TOX high mobility group box family member 4-like isoform X4

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815616.1 True 3384 mRNA 0.49 9 12753035 12759269

Neighbor

gene id symbol gene type direction distance location
chd8 chd8 coding upstream 1067 12730445 ~ 12751968 (+)
cbln12 cbln3,LOC103360302,LOC104927970,LOC101077223,LOC104956581 coding upstream 24116 12725612 ~ 12728919 (+)
trim110 cbln3,LOC102310989,LOC102795120,LOC102215561 coding upstream 27663 12720716 ~ 12725372 (+)
acin1a acin1 coding upstream 68339 12665232 ~ 12684696 (+)
si:ch211-14a17.10 NA coding upstream 89837 12632485 ~ 12663198 (+)
LOC120568999 LOC104956575,LOC101467645 coding downstream 30578 12789847 ~ 12794774 (+)
eif2b5 eif2b5 coding downstream 36134 12795403 ~ 12801070 (+)
LOC120567759 vipr1,LOC106517907,LOC107384262 coding downstream 54049 12813318 ~ 12836982 (+)
ctdsplb LOC103360289,LOC102790982 coding downstream 95833 12855102 ~ 12869142 (+)
oxsr1a LOC104927954,LOC103360287,LOC100697833,LOC102210831,LOC102290626 coding downstream 129274 12888543 ~ 12901425 (+)
G113852 NA non-coding upstream 125516 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 150113 12601183 ~ 12602922 (+)
G113811 NA non-coding upstream 396314 12356340 ~ 12356721 (+)
G113782 NA non-coding upstream 531351 12221376 ~ 12221684 (+)
G113778 NA non-coding upstream 543595 12208714 ~ 12209440 (+)
G113938 NA non-coding downstream 19071 12778340 ~ 12779398 (+)
G113956 NA non-coding downstream 102356 12861625 ~ 12874310 (+)
G114000 NA non-coding downstream 267810 13027079 ~ 13028170 (+)
G114008 LOC104953400 non-coding downstream 392830 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 436992 13196261 ~ 13198734 (+)
ap1g2 LOC106903824,LOC103138413,LOC106934762,LOC101486457,LOC103478890,LOC100694377 other upstream 153195 12582642 ~ 12599840 (+)
LOC120568189 nop9 other upstream 586758 12157449 ~ 12166277 (+)
abhd4 abhd4 other upstream 625013 12122669 ~ 12128022 (+)
pkia pkia,LOC102780447,LOC102205080 other upstream 1406810 11332568 ~ 11346225 (+)
LOC120568835 NA other upstream 1866557 10885595 ~ 10886478 (+)
LOC120568152 LOC104963178 other downstream 142270 12901539 ~ 12907243 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other downstream 152170 12911439 ~ 12919198 (+)
G113979 LOC104959684 other downstream 169946 12929215 ~ 12975637 (+)
LOC120569010 NA other downstream 193279 12952548 ~ 12960349 (+)
col6a1 col6a1 other downstream 251306 13010575 ~ 13074594 (+)

Expression


Co-expression Network