LOC120568237


Basic Information

Item Value
gene id LOC120568237
gene name NA
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 35719998 ~ 35722919 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815617.1
ATTAAAGAAATGGATGTTTGATCGGACCCCATCATAATTGGGTTAAAAGTGAAAAGGTGTCATGTAAACGGGGCTATTCTGTTAAAAATTGCCATATCACTTTTGAGTGATTGTACCATGTAATTATTCCTAAACGATCTTGATGTGTCACTTAAATGATAATCAATGTGATGTTATCCCTAACTCAGTGTCAAACAAAGTGTCAGGCACAGGGAGAGTCAGTGTGCGAGCTATGTGCCACAGGTCCctgaggaaaaaggagagacCTCACAACTTGAGAATTGTCCTCGAAGACTCCTCCCCAGTGCAGCTGTATGAGACGGTGTGCTCGTGTGCTGCTGGCAAGGCACTTTGCAACCATACCGTGGCTCTCCTTTTTCAGACAGCGACGTACTCTCAGCTCCGCCTCCTTGCTGTACCCCCAGTCCTTAGCTGCACCGAGACAGAGCAACGCTGGCACAAGCCAAGGACTATGGAGCACTCTCTACAAGGCGATGCGGGGGGATATGCCTGATCCTGATGTTTTGAAAGTGGCAGAAGCATATGAAGGCTTTTCACCTGACATAGCACCCCTTATTACCACCATGTCCATCAGTGCTGATGTCCCGCTGGTCAAGTCAGCTTTGGGAAAAGTTCAGGAGGGCAGTCTGATCTCTTACCAGCAGCCAGTGCCAGCTAGCCGCATCATTTTACTCCACACTGGAGCTCCTACACCACCACCTCTGCCTTTGGATGGCTACAGATTGGAGCCCACTTGTTGCCAGTTTGTATGCAGTCTCCACCAGCAACTGCATCTGCAATCTATACTGACCAACTTGGAAATCGCAAGGGCAATAGAAGTGGCAACAAGGGACCAGAGTATGTCTGTGGAGTGGCATCGGGTCAGAAAGATGAGATTAACATCTTCTCACTTTAGGGAGGTTTGTCATGTTCGTGGTCAGACATCAGCAGAACATCTCGCTGAAAGACTGCTCAGGGGTGTGGCCCAAACATCGGTCATGAAAAGAGGTCTGGCATTGGAGCCACAGGCCATTCAAGAGTACTGTAAAGTGAAGAACAACAGCTACTGGCCTTGTGGCTTCGTCATACACCCTGATGCCCCCTGGTTAGGGTCTTCTCCCGATGGTGTTGTTTTTGACCCCACAGACAACCCACCCTTTGGCCTGTTGGAGGTAAAATGCCCCAATGTCAAGAGTTATGTTGACTGCAAATACCTGAAGCTCCACAATGACTCCATGAAgctaaaaaagcaacacagctacTACTGGCAGGTCCAAGGGCAACTCCTACTGACAGGTATGGACTGGTGTgactttgttgtttttgcagAGGAGGACATGGTCATTCAAAGGATCTACAAGGACCCAGAGGTGGCTGCAGTCATCAGGGAGAAGggggattttttctttttctacttttacttatcATGTTCCATGAAAACTTGAATCACCCCATTCTCCCTagatatgtgtttgtgtaaaatgtaatcTCATAGTTCTCATTACAATGTACACATGCACATGTTTGTAAATAGTTTCatgtttatgtactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCATTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTGTTAAAATGTCTGATGTATTTGTGTCAGAGCTACTG
>XM_039815618.1
CCCACTTCCGCTCGCCTCATTCCTGAGTCATCCTGACCTGAAGATGGCGTTGTTTTATACAAGAAGCCTGCAAGATCTCCCTGAATTTACCATCAGTGATTTGCACCGGATTACTAACTCATTTGCATCTGCTCCCAGGAGTAAGAGAGAGAAGGGgttcaaaatgtacatttccCAGTTCATTGACAACTATGAAgTGTCAAACAAAGTGTCAGGCACAGGGAGAGTCAGTGTGCGAGCTATGTGCCACAGGTCCctgaggaaaaaggagagacCTCACAACTTGAGAATTGTCCTCGAAGACTCCTCCCCAGTGCAGCTGTATGAGACGGTGTGCTCGTGTGCTGCTGGCAAGGCACTTTGCAACCATACCGTGGCTCTCCTTTTTCAGACAGCGACGTACTCTCAGCTCCGCCTCCTTGCTGTACCCCCAGTCCTTAGCTGCACCGAGACAGAGCAACGCTGGCACAAGCCAAGGACTATGGAGCACTCTCTACAAGGCGATGCGGGGGGATATGCCTGATCCTGATGTTTTGAAAGTGGCAGAAGCATATGAAGGCTTTTCACCTGACATAGCACCCCTTATTACCACCATGTCCATCAGTGCTGATGTCCCGCTGGTCAAGTCAGCTTTGGGAAAAGTTCAGGAGGGCAGTCTGATCTCTTACCAGCAGCCAGTGCCAGCTAGCCGCATCATTTTACTCCACACTGGAGCTCCTACACCACCACCTCTGCCTTTGGATGGCTACAGATTGGAGCCCACTTGTTGCCAGTTTGTATGCAGTCTCCACCAGCAACTGCATCTGCAATCTATACTGACCAACTTGGAAATCGCAAGGGCAATAGAAGTGGCAACAAGGGACCAGAGTATGTCTGTGGAGTGGCATCGGGTCAGAAAGATGAGATTAACATCTTCTCACTTTAGGGAGGTTTGTCATGTTCGTGGTCAGACATCAGCAGAACATCTCGCTGAAAGACTGCTCAGGGGTGTGGCCCAAACATCGGTCATGAAAAGAGGTCTGGCATTGGAGCCACAGGCCATTCAAGAGTACTGTAAAGTGAAGAACAACAGCTACTGGCCTTGTGGCTTCGTCATACACCCTGATGCCCCCTGGTTAGGGTCTTCTCCCGATGGTGTTGTTTTTGACCCCACAGACAACCCACCCTTTGGCCTGTTGGAGGTAAAATGCCCCAATGTCAAGAGTTATGTTGACTGCAAATACCTGAAGCTCCACAATGACTCCATGAAgctaaaaaagcaacacagctacTACTGGCAGGTCCAAGGGCAACTCCTACTGACAGGTATGGACTGGTGTgactttgttgtttttgcagAGGAGGACATGGTCATTCAAAGGATCTACAAGGACCCAGAGGTGGCTGCAGTCATCAGGGAGAAGggggattttttctttttctacttttacttatcATGTTCCATGAAAACTTGAATCACCCCATTCTCCCTagatatgtgtttgtgtaaaatgtaatcTCATAGTTCTCATTACAATGTACACATGCACATGTTTGTAAATAGTTTCatgtttatgtactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCATTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTGTTAAAATGTCTGATGTATTTGTGTCAGAGCTACTG
>XM_039815620.1
CCCACTTCCGCTCGCCTCATTCCTGAGTCATCCTGACCTGAAGATGGCGTTGTTTTATACAAGAAGCCTGCAAGATCTCCCTGAATTTACCATCAGTGATTTGCACCGGATTACTAACTCATTTGCATCTGCTCCCAGGAGTAAGAGAGAGAAGGGgttcaaaatgtacatttccCAGTTCATTGACAACTATGAAgATTGTCCTCGAAGACTCCTCCCCAGTGCAGCTGTATGAGACGGTGTGCTCGTGTGCTGCTGGCAAGGCACTTTGCAACCATACCGTGGCTCTCCTTTTTCAGACAGCGACGTACTCTCAGCTCCGCCTCCTTGCTGTACCCCCAGTCCTTAGCTGCACCGAGACAGAGCAACGCTGGCACAAGCCAAGGACTATGGAGCACTCTCTACAAGGCGATGCGGGGGGATATGCCTGATCCTGATGTTTTGAAAGTGGCAGAAGCATATGAAGGCTTTTCACCTGACATAGCACCCCTTATTACCACCATGTCCATCAGTGCTGATGTCCCGCTGGTCAAGTCAGCTTTGGGAAAAGTTCAGGAGGGCAGTCTGATCTCTTACCAGCAGCCAGTGCCAGCTAGCCGCATCATTTTACTCCACACTGGAGCTCCTACACCACCACCTCTGCCTTTGGATGGCTACAGATTGGAGCCCACTTGTTGCCAGTTTGTATGCAGTCTCCACCAGCAACTGCATCTGCAATCTATACTGACCAACTTGGAAATCGCAAGGGCAATAGAAGTGGCAACAAGGGACCAGAGTATGTCTGTGGAGTGGCATCGGGTCAGAAAGATGAGATTAACATCTTCTCACTTTAGGGAGGTTTGTCATGTTCGTGGTCAGACATCAGCAGAACATCTCGCTGAAAGACTGCTCAGGGGTGTGGCCCAAACATCGGTCATGAAAAGAGGTCTGGCATTGGAGCCACAGGCCATTCAAGAGTACTGTAAAGTGAAGAACAACAGCTACTGGCCTTGTGGCTTCGTCATACACCCTGATGCCCCCTGGTTAGGGTCTTCTCCCGATGGTGTTGTTTTTGACCCCACAGACAACCCACCCTTTGGCCTGTTGGAGGTAAAATGCCCCAATGTCAAGAGTTATGTTGACTGCAAATACCTGAAGCTCCACAATGACTCCATGAAgctaaaaaagcaacacagctacTACTGGCAGGTCCAAGGGCAACTCCTACTGACAGGTATGGACTGGTGTgactttgttgtttttgcagAGGAGGACATGGTCATTCAAAGGATCTACAAGGACCCAGAGGTGGCTGCAGTCATCAGGGAGAAGggggattttttctttttctacttttacttatcATGTTCCATGAAAACTTGAATCACCCCATTCTCCCTagatatgtgtttgtgtaaaatgtaatcTCATAGTTCTCATTACAATGTACACATGCACATGTTTGTAAATAGTTTCatgtttatgtactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCATTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTgtttatgtaggctactgtatatagttgtcattacaaaccTATACAAGGTGCCTTTTGTTAAAATGTCTGATGTATTTGTGTCAGAGCTACTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815617.1 False 1795 mRNA 0.45 3 35719998 35722384
XM_039815618.1 True 1804 mRNA 0.46 4 35719998 35722919
XM_039815620.1 False 1712 mRNA 0.46 3 35719998 35722919

Neighbor

gene id symbol gene type direction distance location
LOC120567708 NA coding downstream 261793 35456865 ~ 35458205 (-)
LOC120568905 NA coding downstream 274418 35444236 ~ 35445580 (-)
LOC120567766 NA coding downstream 288904 35429810 ~ 35431094 (-)
LOC120567706 NA coding downstream 297905 35420748 ~ 35422093 (-)
LOC120569118 NA coding downstream 547985 35169138 ~ 35172013 (-)
LOC120568240 plppr5,LOC104933489,LOC101073565,LOC102211483 coding upstream 69030 35791949 ~ 35809067 (-)
tyw3 NA coding upstream 104031 35826950 ~ 35836030 (-)
LOC120568882 NA coding upstream 188668 35911587 ~ 35914279 (-)
LOC120569092 NA coding upstream 205711 35928630 ~ 35933752 (-)
LOC120567710 NA coding upstream 239672 35962591 ~ 35964054 (-)
G120559 NA non-coding downstream 28782 35685487 ~ 35691216 (-)
LOC120568941 NA non-coding downstream 66667 35650694 ~ 35653331 (-)
G120520 NA non-coding downstream 152151 35567305 ~ 35567847 (-)
G120517 NA non-coding downstream 159969 35559468 ~ 35560029 (-)
G120515 NA non-coding downstream 160851 35558160 ~ 35559147 (-)
LOC120568238 NA non-coding upstream 16764 35739683 ~ 35741354 (-)
LOC120568239 NA non-coding upstream 48140 35771059 ~ 35778424 (-)
LOC120568243 NA non-coding upstream 116942 35839861 ~ 35843853 (-)
G120617 NA non-coding upstream 175334 35898253 ~ 35898958 (-)
G120623 NA non-coding upstream 180042 35902961 ~ 35903223 (-)
LOC120567705 NA other downstream 557017 35161809 ~ 35162981 (-)
LOC120568374 NA other downstream 650211 35058781 ~ 35069787 (-)
LOC120567704 NA other downstream 705753 35011108 ~ 35014245 (-)
G120390 NA other downstream 824085 34895579 ~ 34895913 (-)
LOC120568808 LOC103366832,LOC103395886,LOC104944844 other downstream 927231 34787168 ~ 34792767 (-)
LOC120567714 NA other upstream 986376 36709295 ~ 36737250 (-)
trnal-uaa_10 NA other upstream 1276898 36999817 ~ 36999899 (-)
trnal-caa_5 NA other upstream 1281041 37003960 ~ 37004042 (-)
trnal-uaa_11 NA other upstream 1281682 37004601 ~ 37004683 (-)
trnal-caa_6 NA other upstream 1315592 37038511 ~ 37038593 (-)

Expression


Co-expression Network