orc2 (LOC102787487)


Basic Information

Item Value
gene id orc2
gene name LOC102787487
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13106699 ~ 13112264 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815655.1
CTTTTGCTTGTCATGTGGTTTAAAAACTTCAGGAGGATGGCGCGGAAAGTTGTCACGCCACACAGCGTAGCTCTCAGTTTATGAaagttttgtttacattttcttCGGGCGGTACTGACTCGTTATCTGTCATCATGAGTGTGTTGGAGGTGAAGTTCATTGGTGATGGAGATGCTCTGGAGCATATCGTGGACAAACCGGAGGGTGTGCAGAGCAACAGTGGGTCTGTTCAGAAGATGGTAACGTTTAAAAGCCAAGCTGGACGACGGACCATAGTGGATGCAGAACATGATGGGGACGAAAATGAAGTCCTTGATGAGCAGAACTATGTCCAAGCTTTAGGAACAGACAATGCAGAAGAAGACGAGGAGGGTATGTACAGAATGGCTGGATCCTCCATTTTCACCTTTCAGAAAGGCAAACGTGGACACAGCATGGCCCAGACTGCAAGTGAGTTGGCTCGGACTCCTGGGAAAAGCGTGACCTTCAGCACAACCCCCAACATTGAACCCTCGACTCCCACCCGAACATGCCGCAACCACAGAGGGGAAAGCAGGACACCTCAGAGGAGCAAGAAGGTTCAGTTTGTCTCCACAACACCCCACAGGCTCAGGAAGAGAATGACAAcTCCGAGCATCCGATCAGACAGCGATAGCGAGCTGTCGCCCTCTGACTCtggggaagaggaggatgaagatgggATAGAGGAAGAGCAGAAAGTAAAGAAAGAAGACCAGGAGAACTTGAAGACTCTAAGAACACCCAGTAAAGGTTCATCTGCAGCTCTCTACAAGACTCCTGCCAAGAAGAGCAAGACCGCTTCTGAAGTACCCAATCAGCCCAGTATGATTGAGGAGTATTTTGAAGCCCATGGCAGTTCAAAGGTCTTGACATCAGACCGCACGCTAGAGCGTTTACACACACCTAAACTTGACAGGgaGACGTTGGTCCAGCTTTTAGAAGGAAAGCTGTCCTGCTGCTCCAAAGAGATCCAGCAGCTCCACAACAAACACCGAAAGCACTTTAGCAAATGGatgttacagttacaGTTGGGATTCAGTGTGCTGGTCTACGGTTTGGGCAGCAAAAAATCTCTGCTGGAAGACTTCCGTGTATCTCACTTGGCTCAGGAAATCCACCTCGTGGTCAATGGATTCTTCCCTTCCATTACTCTTAAATCAATCCTAAATGCTTTGACGTGCGAGGTTTTAGAGCACCAGGGAAGTTTCCGGACCCCCTCAGACCAGATCCAGTACATCGCTCAGACTCTCAAAGACAGCCCAGATCTCCATGTATACCTGCTAATCCATAATATCGACGGACCAATGCTGCGAGGAGAGAAGACCCAGAGTGCACTGGGGCAGCTGGCATCCCTGCCCAACCTGCACTTGGTGGCTTCTTTAGACCACATTAACGCTCCACTGGtgTGGGACCAGTTTAAGCAGAGCCAGTTTAACTGGTTGTGGTGGGAGTGTGTGACCTTTCAGCACTACGCAGAGGAAACGTCATATGAAAACTCGCTCCTGGTGCAGCAGACTGGCGCTCTCGCTCTGTCCTCCCTTACACACGTGCTACGCAGCTTGACACCCAATGCAAGAGGAATTTTCAAACTGTTGGTGAAATTCCAGCTGGAAAACAAAGATAACCCTTcatacacagGATTGTCATTCCAAGATTTCTACCAGCGTTGTCGCGAGGCGTTCTTGGTGAACTCTGACCTCACACTGAGGACCCAGCTGACCGAGTTCAGAGACCACAAACTGATACGGACACGCAAGGGTGCAGATGGTGTGGAGTACTTAATTGTTGCCGTGGATGCAAGCACGTTGATGGATTTCCTGGAGAACGAAGAGGGTGACTGAGCGGAGAAGACTTTAGACTTGTCTCACTTATACTTCATCCACTGACTTTACCAGAAAATGGATATTTTGGTTGAATCGGTCACTGATATAAAGGCCCATGAGCTTAGCTTTCAGGCTCTACAGTTTAAATGAATGGCTTGAATCTAATTATTGGTGAATTGTTTCACTTCACGAAATGCCCCATTATAGCTCTTCACATCTTGTGTGTTTTGATGCATCACGTTTTCAGCTAACATCTGTAATTAAATTCCACACATAAGGA
>XM_039815656.1
CTTTTGCTTGTCATGTGGTTTAAAAACTTCAGGAGGATGGCGCGGAAAGTTGTCACGCCACACAGCGTAGCTCTCAGTTTATGAaagttttgtttacattttcttCGGGCGGTACTGACTCGTTATCTGTCATCATGAGTGTGTTGGAGGTGAAGTTCATTGGTGATGGAGATGCTCTGGAGCATATCGTGGACAAACCGGAGGGTGTGCAGAGCAACAGTGGGTCTGTTCAGAAGATGGTAACGTTTAAAAGCCAAGCTGGACGACGGACCATAGTGGATGCAGAACATGATGGGGACGAAAATGAAGTCCTTGATGAGCAGAACTATGTCCAAGCTTTAGGAACAGACAATGCAGAAGACGAGGAGGGTATGTACAGAATGGCTGGATCCTCCATTTTCACCTTTCAGAAAGGCAAACGTGGACACAGCATGGCCCAGACTGCAAGTGAGTTGGCTCGGACTCCTGGGAAAAGCGTGACCTTCAGCACAACCCCCAACATTGAACCCTCGACTCCCACCCGAACATGCCGCAACCACAGAGGGGAAAGCAGGACACCTCAGAGGAGCAAGAAGGTTCAGTTTGTCTCCACAACACCCCACAGGCTCAGGAAGAGAATGACAAcTCCGAGCATCCGATCAGACAGCGATAGCGAGCTGTCGCCCTCTGACTCtggggaagaggaggatgaagatgggATAGAGGAAGAGCAGAAAGTAAAGAAAGAAGACCAGGAGAACTTGAAGACTCTAAGAACACCCAGTAAAGGTTCATCTGCAGCTCTCTACAAGACTCCTGCCAAGAAGAGCAAGACCGCTTCTGAAGTACCCAATCAGCCCAGTATGATTGAGGAGTATTTTGAAGCCCATGGCAGTTCAAAGGTCTTGACATCAGACCGCACGCTAGAGCGTTTACACACACCTAAACTTGACAGGgaGACGTTGGTCCAGCTTTTAGAAGGAAAGCTGTCCTGCTGCTCCAAAGAGATCCAGCAGCTCCACAACAAACACCGAAAGCACTTTAGCAAATGGatgttacagttacaGTTGGGATTCAGTGTGCTGGTCTACGGTTTGGGCAGCAAAAAATCTCTGCTGGAAGACTTCCGTGTATCTCACTTGGCTCAGGAAATCCACCTCGTGGTCAATGGATTCTTCCCTTCCATTACTCTTAAATCAATCCTAAATGCTTTGACGTGCGAGGTTTTAGAGCACCAGGGAAGTTTCCGGACCCCCTCAGACCAGATCCAGTACATCGCTCAGACTCTCAAAGACAGCCCAGATCTCCATGTATACCTGCTAATCCATAATATCGACGGACCAATGCTGCGAGGAGAGAAGACCCAGAGTGCACTGGGGCAGCTGGCATCCCTGCCCAACCTGCACTTGGTGGCTTCTTTAGACCACATTAACGCTCCACTGGtgTGGGACCAGTTTAAGCAGAGCCAGTTTAACTGGTTGTGGTGGGAGTGTGTGACCTTTCAGCACTACGCAGAGGAAACGTCATATGAAAACTCGCTCCTGGTGCAGCAGACTGGCGCTCTCGCTCTGTCCTCCCTTACACACGTGCTACGCAGCTTGACACCCAATGCAAGAGGAATTTTCAAACTGTTGGTGAAATTCCAGCTGGAAAACAAAGATAACCCTTcatacacagGATTGTCATTCCAAGATTTCTACCAGCGTTGTCGCGAGGCGTTCTTGGTGAACTCTGACCTCACACTGAGGACCCAGCTGACCGAGTTCAGAGACCACAAACTGATACGGACACGCAAGGGTGCAGATGGTGTGGAGTACTTAATTGTTGCCGTGGATGCAAGCACGTTGATGGATTTCCTGGAGAACGAAGAGGGTGACTGAGCGGAGAAGACTTTAGACTTGTCTCACTTATACTTCATCCACTGACTTTACCAGAAAATGGATATTTTGGTTGAATCGGTCACTGATATAAAGGCCCATGAGCTTAGCTTTCAGGCTCTACAGTTTAAATGAATGGCTTGAATCTAATTATTGGTGAATTGTTTCACTTCACGAAATGCCCCATTATAGCTCTTCACATCTTGTGTGTTTTGATGCATCACGTTTTCAGCTAACATCTGTAATTAAATTCCACACATAAGGA

Function

NR:

description
origin recognition complex subunit 2

GO:

id name namespace
GO:0006260 DNA replication biological_process
GO:0000808 origin recognition complex cellular_component
GO:0005634 nucleus cellular_component

KEGG:

id description
K02604 ORC2; origin recognition complex subunit 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815655.1 True 2124 mRNA 0.48 16 13106699 13112264
XM_039815656.1 False 2121 mRNA 0.48 16 13106699 13112264

Neighbor

gene id symbol gene type direction distance location
zgc:162816 LOC103362211,LOC102298354,LOC107097021 coding upstream 898 13101402 ~ 13105801 (+)
col6a2 col6a2 coding upstream 10283 13081743 ~ 13096416 (+)
LOC120567921 LOC103362241,LOC104934209,LOC101483427 coding upstream 61008 13038890 ~ 13045691 (+)
LOC120567922 NA coding upstream 68887 13033439 ~ 13037812 (+)
LOC120567919 LOC104962026,LOC103362208,LOC102293788,LOC102208917,LOC101474809 coding upstream 80768 12979093 ~ 13025931 (+)
pecr pecr coding downstream 6305 13118569 ~ 13122673 (+)
si:ch211-227n13.3 NA coding downstream 46752 13159016 ~ 13163518 (+)
LOC120569132 LOC104948641,LOC103362219,LOC104938220,LOC103396234 coding downstream 51575 13163839 ~ 13166831 (+)
mcm6 mcm6,LOC106569474 coding downstream 64561 13176825 ~ 13183207 (+)
LOC120568679 NA coding downstream 101052 13213316 ~ 13223854 (+)
G114000 NA non-coding upstream 78529 13027079 ~ 13028170 (+)
G113956 NA non-coding upstream 232389 12861625 ~ 12874310 (+)
G113938 NA non-coding upstream 327301 12778340 ~ 12779398 (+)
G113852 NA non-coding upstream 479180 12626079 ~ 12627519 (+)
G113843 LOC104931181,LOC104949953,LOC107384241,LOC103360313 non-coding upstream 503777 12601183 ~ 12602922 (+)
G114008 LOC104953400 non-coding downstream 39835 13152099 ~ 13153594 (+)
G114033 NA non-coding downstream 83997 13196261 ~ 13198734 (+)
G114035 NA non-coding downstream 87504 13199768 ~ 13200746 (+)
G114037 NA non-coding downstream 92561 13204825 ~ 13207023 (+)
LOC120568783 NA non-coding downstream 138487 13250751 ~ 13254585 (+)
col6a1 col6a1 other upstream 32105 13010575 ~ 13074594 (+)
G113979 LOC104959684 other upstream 131062 12929215 ~ 12975637 (+)
LOC120569010 NA other upstream 146350 12952548 ~ 12960349 (+)
LOC120567760 LOC103360284,LOC108238605,LOC104963178 other upstream 187501 12911439 ~ 12919198 (+)
LOC120568152 LOC104963178 other upstream 199456 12901539 ~ 12907243 (+)
rpl37a rpl37a,RPL37A other downstream 2332 13114596 ~ 13117356 (+)
ndufb3 ndufb3 other downstream 10766 13123030 ~ 13125463 (+)
si:ch73-71c20.5 NA other downstream 71020 13183284 ~ 13186364 (+)
LOC120568245 LOC103365337,LOC101481118,LOC102206401,LOC102290843 other downstream 1174886 14287150 ~ 14295993 (+)
rgs18 rgs18,LOC106918816,LOC103139989,LOC103479038 other downstream 1873513 14985777 ~ 14993083 (+)

Expression


Co-expression Network