LOC120568263 (LOC104953400)


Basic Information

Item Value
gene id LOC120568263
gene name LOC104953400
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13152095 ~ 13158290 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815657.1
ATTTTGCATAGACCTACAAAATTGAGATTGGGACCATCCCTAAATTTATCGATGTCCAAATTAAATATTACTTCTCTTTTACTGAAAGACCTCCAACTGCTATAGCTGTAGGACTGCAATCGTTGCTCTGGTTTAAGAGAGGACTTTGAACACACACATAGCAGAGGAATTTCAACCCTGGCAGAGGGATCCCTAAGGACAGGCATAGCTACACGAACATTCAAAGCAGAAAGAAGAGGACGtcttccattttttttgttgctctttACCTCATAATTTCCCGTGTGTTGGATTCAGTGAGCTGCAGacacagaggaaagaggacaatGTGGAAAGCAGCAGTGTCTGTGTTCCTGCTACTAAACATGGATATACAGGTGAATGGTGCTGTAGATAAGACGAGGGGGTCTGTGGTAGAAAACTCCAGGACAGAGAAGAATGTGAAGACAGAAGAGGCTGAAGTCAACAACAACATTCCTGCAAGTGACACTGCTTCTTCAGGTTTTTTGGGCAACTTGCTGGTGGTACCCATGGATGGGAGTCACTGGGTGGGTATTAAGGCCATTGCCCAAGAAATGGGTCGTCGTGGACACCGGGTTACAGTGGTGATTCCAGAGATCAGCATACGGATGGGCCCAGGGAAACACTACGACACTGTGACCTATCCTGTTCCTTATGACAAGGCTCATTTTGACTCTATCATGGCCTCACAGAAGGACATGCTGAAAAAAACTGCACATTCTTTCACGGAGAAGATACGGAAAGGATTCTCAAAATTCCAGAAAATTACAGGCTTTATCCACACCACAGCAGAGAGCCTACTGTTCAATGTCAGTCTGATCTCACATCTAGCACAGCAGAACTTTGACGCAGTCCTAACGGACCCCATGGTGCCCACAGGCTCATTAATAGCTCGGAAATTTGGTATCCCTACTGTAAATTTGCTGAGGGGAATTCCATGTTCCTTGGATATGAAGTCTGCAGGCTGCCCCTCCCCGCCCTCATATGTGCCCCGCTTTTTCACCAGATACACAGATAAAATGAGCTTCCAGGAGAGAGCTTTCAACACTTTGGTGGCTTTATTGGAGCCATTGTTATGCCGACTGTTGTTTTGGCACTTTGACCAAATAGCCTATCAGTTTCTGGGAGAGGAGGTGGGCATAGCTGAAGTGCTGTCAGAGTCTGCTATCTGGCTGCTGAGGTTGGACTTCACACTGGAGTTCCCACGTCCTATCATGCCTAATGTAGTACTAGTTGGTGGAATCAACTGCAACGTGAGACATCCTCTTCCTGAGgATCTGGAGTCCTGGGTGTCAGGAGAACATGGGTTTGTAGTGTTCACCCTGGGCACCATGGTGTCAGATCTGCCAGAAGAGACAACCTCCGTCTTCTTAGAAGCTTTCAGACAGATTCCACAGAAGGTAATATGGAGGTACACTGGGCAGGTTCCCGATAGTTTCCCAGAAAATGTGAAGTTGATGAAATGGGTGCCTCAGAATGACCTACTAGcACATCCTGGAGCTCGGGCTTTCATCACTCATGCTGGCTCTCATGGTCTCTTTGAGGGACTGTGTCACGCTGTTCCCATGGTGATGATGCCAGTTGCAGGGGACCAAGCTGACAACGCAGTGAGGTTTGCAAGCAGAGGAGCTGGAGTCGTGTTGGATATTTATTCGATCACTACAGAGAGCCTTCTTCAGGGACTGAATGAGGTCATCAATGACACCAGGTATAAAGAGAACATGCAGAAGCTGTCAGCTCTCCATAAAGACCGGCCAGTTGACCCACTGGACCTTTCAGTGTACTGGACAGAATTTGTGATGCGGCACAAAGGGGCAAAACATCTCAGACCTGCTGTCCTTGACCTCAACTGGCTCCAGTACTACTGCCTGGATGTAATAGCAGTACTGGCTACTCTAGTGCTGTTTTTTGTAATACTGATAGTAAAATGCTTGAAACTATGCTTCTGGAAACTGAGCAGGAAGAGGAAGCAGGACTAACCTTCGGGTTTCTTGTGCACATTTCCAAAGAAATTTTTTTACGTAATCAAATTACCAGAAAACAACTGTTGGTTGCTAATCCACACCCGCCACCCAATGCctttacatgttttaacatactGAATCAGAAATCTAGAGAAACAAGCTTGATAAGGGATAGGTGTCATATTAAGATACTTCAGGACTCTAGGACTGTTTATTAAAGCGGTGTTGGTTTAATGAATAACAAACGTGTGACCTCAGTGATGATAAATGAATGAACCTTTAGGTACTGGTTCTATGGATGTAAGTGATATCTCCACAGGTTGTCTGGTAAGAACAGGAAAGATGATGATTGGTCAACAAATGCAGTCCAtagtacacacactcactgacatGCCATTCATTTATTGTTGGGAGTTTAGAATATCCCAATGTGAATGTGATTACTACGATAAAGGGAGTAAACAGAGAACATGTACTGACATTAATTATATGCTGTCATAATAACAAGCAGTACGGCATGAAATACACAATACATGAATCCGCTACCGCTCAGAGCAGTTACGTGTTTGTGAGTTGAAGTTGTTTTTgttatatcttttatttttcgCTCTTTTGTCAATGCTTGTACACCTTCTGGTAAGGACAGTTCattatttttgtgaaaaagaagaaacatatCAAATTGAAGTTTGAGTGATGAAAATAAAttgacaaacaaaagaaaacagtg

Function

NR:

description
PREDICTED: UDP-glucuronosyltransferase 1-1-like

GO: NA

KEGG:

id description
K00699 UGT; glucuronosyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815657.1 True 2715 mRNA 0.44 9 13152095 13158290

Neighbor

gene id symbol gene type direction distance location
LOC120568264 LOC104953400 coding downstream 617 13132932 ~ 13151478 (-)
cfap410 cunh21orf2,LOC102788189 coding downstream 36806 13112363 ~ 13115289 (-)
xirp1 LOC104959684 coding downstream 207377 12931398 ~ 12944718 (-)
LOC120568154 NA coding downstream 266648 12872858 ~ 12885447 (-)
hhatla hhatl,LOC108238572,LOC103360290,LOC106926958 coding downstream 297776 12846128 ~ 12854319 (-)
tmbim1a tmbim1 coding upstream 27964 13186254 ~ 13195957 (-)
casp8 NA coding upstream 38449 13196739 ~ 13207620 (-)
LOC120568680 catip coding upstream 49740 13208030 ~ 13214290 (-)
LOC120568677 NA coding upstream 56590 13214880 ~ 13218070 (-)
LOC120567607 LOC104935780 coding upstream 66607 13224897 ~ 13230904 (-)
G114166 rpl37a,RPL37A non-coding downstream 34645 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 47698 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 57266 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 60779 13088686 ~ 13091316 (-)
G114131 NA non-coding downstream 67711 13081614 ~ 13084384 (-)
G114177 NA non-coding upstream 18513 13176803 ~ 13177751 (-)
G114183 NA non-coding upstream 39455 13197745 ~ 13223865 (-)
G114196 lect1 non-coding upstream 122641 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 128361 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 129892 13288182 ~ 13288993 (-)
G114152 NA other downstream 63532 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 176767 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 383470 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 543526 12601180 ~ 12608569 (-)
G113805 NA other downstream 933828 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 311241 13469531 ~ 13482225 (-)
tfr1a NA other upstream 791581 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1455323 14613613 ~ 14618224 (-)
G114680 NA other upstream 1637628 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2131792 15290082 ~ 15304610 (-)

Expression


Co-expression Network