LOC120568264 (LOC104953400)


Basic Information

Item Value
gene id LOC120568264
gene name LOC104953400
gene type coding
species eurasian perch (Perca fluviatilis)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_053122.1
NCBI id CM020919.1
chromosome length 39550354
location 13132932 ~ 13151478 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome

Sequence

>XM_039815658.1
AATAGGACTTTGAACACACACAACTTGCTAAAATCACAGAGGAATTTCAACAGCGACCATAAGGGCAGGAATTGTTTCCATGAGAAACACaaagaagagacagaggaaagagaacaatGTGGAAAGCAGCAGTGTCTGTGTTCCTGCTACTAAACATGGATATACAGGTGAATGGTGCTGTAGATAAGACGAGGGGGTCTGTGGTAGAAAACTCCAGGACAGAGAAGAAGGTGAAGACAGAAGAGGCTGAAGCCAACAACAACATTCCTGCAAGTGACACTGCTTCTTCAGGTTTTTTGGGCAACTTGCTGGTGATACCCATGGATGGGAGTCACTGGGTGGGTATTAAGGCCATTGCCCAAGAAATGGGTCGTCGTGGACACCGGGTTACAGTGGTGATTCCAGAGATCAGCATGCGGATGGGCCCAGGGAAACACTACGACACTGTGACCTATCCTGTTCCTTATGACAAGGCTCATATGGATTCTGTCATGGCCTCACACAAGGACATGATGGAAAAATCTGCACAGTATTTCACGGAGAAAATAAGGATTGGATTCTCAAAATTCCAGAAAATTACAGGCTTTATCCACACCACAGCAGAGAGCCTACTGTTCAATGTCAGTCTGATCTCACATCTGGCACAGCAGAACTTTGACGCAGTCCTAACAGACCCTGTGGTGCCCACAGGCTCATTAATAGCTCTGAAATTAGGTATCCCTACTATAAATTTGCTGAGGGGGATTCCATGTACCTTGGATATGAAGTCTGCAGGCTGCCCCTCCCCGCCCTCATATGTGCCCCGCTTGTTGACCAGATACACAGATAAAATGAGCTTCCAGGAGAGAGCTTTCAACACTTTGGTGGTTTTATTGGAGCCGTTGTTATGCCGACTGTTGTTTTGGCACTTTGACCAAATAGCCTATCAGTTTCTGGGAGAGGAGGTGGGCATAGCTGAAGTGCTGTCAGAGTCTGCTATCTGGCTGCTGAGGATGGACTTCACACTGGAGTTCCCACGTCCTATCACGCCTAATGTAGTACTAGTTGGTGGAATCAACTGCAACGTGAGACACCCTCTTCCTGAGgATCTGGAGTCCTGGGTGTCAGGAGAACATGGGTTTGTAGTGTTCACCCTGGGCACCATGGTGTCAGATCTGCCAGAAGAGACAACCTCCGTCTTCTTAGAAGCTTTCAGACAGATTCCACAGAAGGTTATATGGAGGTACACTGGGCAGGTTCCCAACAGTTTCCCAGAAAATGTGAAGTTGATGAAATGGGTGCCTCAGAATGACCTACTAGcACATCCTGGAGCTCGGGCTTTCATCACTCATGCTGGCTCTCATGGTCTCTTTGAGGGACTGTGTCACGCTGTTCCCATGGTGATGATGCCAAGGGGGGACCAGCCTGACAACGCGGTGAGGTTGGCGAGCAGAGGAGCTGGAGTCGTGTTGGATATTTATTCGATCACTACAGAGAGCCTTCTTCAGGGACTGAATGAGGTCATCAATGACACCAGGTATAAAGAGAACATGCAGAAGCTGTCAGCTCTCCATAAAGACCGGCCAGTTGACCCACTGGACCTTTCAGTGTACTGGACAGAATTTGTGATGCGGCACAAAGGGGCAAAACATCTCAGACCTGCTGTCCTTGACCTCAACTGGCTCCAGTACTACTGCCTGGATGTAATAGCAGTACTGGCTACTCTAGTGCTGTTTTTTGTAATACTGACAGTACAGTGCTTGAAACTATGCTTCTGGAAACTGAGCAGGAAGAGGAAGCAGGACTAACCTTCTGCTACATTTGCACCTTCATCCCAGCAATAACACTGTATGTAAGAGAGATTAAAAACCCATCCTGGTCATAAAAATATTAATGCAAAGTTAAGTCAGTTATGGTTTAAATATGCGACAAGGAGTACAAACACTTAAGGAAACCAGGGTTTCTTGTGCACATTTCCAAAGAAGTTTCCAAGTGATCACATTACCAGAAAACAACTGTTGGTTGCTAATCCACACCATTTACACAATGCctttacatgttttaacatactGAATCAGAAATCTAGAGAAACAAGCTTGATAAGGAATAGGTGTCATATTAAGATACTTCAGGACTCTAGGACTGTTTATAAAAGCGGTGTTGGTTTAATGAATAACAAACGTGTGACCTCAGTGATGATAAATTAATGAACCTTTAGGTACTGGTTCTATGGATGTAAGTGATATCTCCACAGGTTGTCTGGTAAGAACAGGAAAGATGGTGATGTAAACAAATGCAGTCCATAGTACACACACTCATTGACATGCCATTCATTTTTGGTAGTTTTGGAATATCCCAATGTGAATGTGATTACTACGATAAAGGGAGTAAACAGAGAACATGTACAGACATTAATTATATgctgtaataataaataacaaacagtAGAATGGATGCACTTCCTCGTATAAACTTTTACCTGTCTCTGGTTCTCCTTGCACCCCCAAAGGGGTATTGGGAAAAATTGCATTCCCTCATATCTAAATTTGTATAGAATGGGAAGGGACCGCGCTTGAAACTAAAAACCCTTCAACGAGATAGGACACAGGGAGGATTAGCTTTACTTAATTTTAATggttttttttggtcttttgttCTTCTTTGTTCTATGGTTTAATCCAAATGCTTCGTTGTCCTGGAGACCAATTGAAGAGAACCTTTCACAACCTCATAGACTACAAGACCTTGTGGTCCAATATACCAACTAAACAGGTTAAAAAACTGCTAGGTCCTCTGATTTCCTTTTTGCTCATAACTTGCGGTTCTGTAATGAGACACGTTGGAGTAGATCTTAAATGGCATAAGCATTCCCCTGTATTTAATAACTTTTCTCTTCTTAGCACCATTTTCTTTTCCAATGTAAGTGTTGTAATAGAACCAGCAGGTGGCCAGTTATTTGTGACGTAATTTTGGAGACATATAGGCTATATAATGATGAAGCTAGTGAATATCTTTGTTGTATAGGTGTTGCACTTTGTAGACGGACCCTGCGCACTTGTCTCATATGGCTGCTCGGAGGGGAGGACGACCCATTTTGATGAGATAAGGTTGAAGCTC

Function

NR:

description
PREDICTED: UDP-glucuronosyltransferase 1-1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_039815658.1 True 3096 mRNA 0.44 10 13132932 13151478

Neighbor

gene id symbol gene type direction distance location
cfap410 cunh21orf2,LOC102788189 coding downstream 17643 13112363 ~ 13115289 (-)
xirp1 LOC104959684 coding downstream 188214 12931398 ~ 12944718 (-)
LOC120568154 NA coding downstream 247485 12872858 ~ 12885447 (-)
hhatla hhatl,LOC108238572,LOC103360290,LOC106926958 coding downstream 278613 12846128 ~ 12854319 (-)
LOC120567650 LOC100690777,LOC102314387,LOC101469034,LOC102212652 coding downstream 288496 12839583 ~ 12844436 (-)
LOC120568263 LOC104953400 coding upstream 617 13152095 ~ 13158290 (-)
tmbim1a tmbim1 coding upstream 34776 13186254 ~ 13195957 (-)
casp8 NA coding upstream 45261 13196739 ~ 13207620 (-)
LOC120568680 catip coding upstream 56552 13208030 ~ 13214290 (-)
LOC120568677 NA coding upstream 63402 13214880 ~ 13218070 (-)
G114166 rpl37a,RPL37A non-coding downstream 15482 13114645 ~ 13117450 (-)
G114159 NA non-coding downstream 28535 13103242 ~ 13104397 (-)
G114130 col6a2,LOC105007837 non-coding downstream 38103 13091647 ~ 13094829 (-)
G114153 LOC105007837 non-coding downstream 41616 13088686 ~ 13091316 (-)
G114131 NA non-coding downstream 48548 13081614 ~ 13084384 (-)
G114177 NA non-coding upstream 25325 13176803 ~ 13177751 (-)
G114183 NA non-coding upstream 46267 13197745 ~ 13223865 (-)
G114196 lect1 non-coding upstream 129453 13280931 ~ 13286164 (-)
G114199 NA non-coding upstream 135173 13286651 ~ 13287220 (-)
G114202 NA non-coding upstream 136704 13288182 ~ 13288993 (-)
G114152 NA other downstream 44369 13084561 ~ 13088563 (-)
LOC120568578 wdr48 other downstream 157604 12966466 ~ 12975328 (-)
LOC120568934 LOC104956577 other downstream 364307 12760748 ~ 12768625 (-)
nedd8l LOC104931181,LOC104949953,LOC107384241,LOC103360313 other downstream 524363 12601180 ~ 12608569 (-)
G113805 NA other downstream 914665 12218062 ~ 12218267 (-)
dis3l2 dis3l2 other upstream 318053 13469531 ~ 13482225 (-)
tfr1a NA other upstream 798393 13949871 ~ 13968811 (-)
LOC120568687 NA other upstream 1462135 14613613 ~ 14618224 (-)
G114680 NA other upstream 1644440 14795918 ~ 14797044 (-)
mfsd8l2 LOC102304717,LOC102799006,LOC108238243,LOC103479065 other upstream 2138604 15290082 ~ 15304610 (-)

Expression


Co-expression Network